RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Bud13Q8R149 637 aa12.65□□□□□ -0.38
Trim11-202ENSMUST00000108809 Stx17Q9D0I4 301 aa12.65□□□□□ -0.38
Trim11-202ENSMUST00000108809 Nup50Q9JIH2 466 aaKnown RBP12.65□□□□□ -0.38
Trim11-202ENSMUST00000108809 Azi2Q9QYP6 405 aa12.65□□□□□ -0.38
Trim11-202ENSMUST00000108809 BcamQ9R069 622 aa12.65□□□□□ -0.38
Trim11-202ENSMUST00000108809 SynrgQ5SV85 1306 aa12.65□□□□□ -0.38
Trim11-202ENSMUST00000108809 Gucy1b3O54865 620 aa12.65□□□□□ -0.39
Trim11-202ENSMUST00000108809 Eif3dO70194 548 aaKnown RBP12.65□□□□□ -0.39
Trim11-202ENSMUST00000108809 AaasP58742 546 aa12.65□□□□□ -0.39
Trim11-202ENSMUST00000108809 Adgrg6Q6F3F9 1165 aa12.65□□□□□ -0.39
Trim11-202ENSMUST00000108809 Chn1Q91V57 459 aa12.65□□□□□ -0.39
Trim11-202ENSMUST00000108809 Calml4Q91WQ9 153 aa12.65□□□□□ -0.39
Trim11-202ENSMUST00000108809 Mettl13Q91YR5 698 aa12.65□□□□□ -0.39
Trim11-202ENSMUST00000108809 Btaf1E9QAE3 1848 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Kiaa1522A2A7S8 1013 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Fam129cD3YZB0 591 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Ap1m1P35585 423 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Atp6v1aP50516 617 aaKnown RBP12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Nt5c2Q3V1L4 560 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Acbd5Q5XG73 508 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Hoxa13Q62424 386 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Lrig3Q6P1C6 1117 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Scyl2Q8CFE4 930 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Pabpc6Q9D4E6 643 aaKnown RBP12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Cse1lQ9ERK4 971 aaKnown RBP12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Fmnl1Q9JL26 1094 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Cul1Q9WTX6 776 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Fam205aA2APU8 1308 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Lrrc38A2VDH3 298 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Rpl13P47963 211 aaKnown RBP12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Polr2fP61219 127 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Phactr1Q2M3X8 580 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Dph1Q5NCQ5 438 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 E2f7Q6S7F2 904 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 GopcQ8BH60 463 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 DcakdQ8BHC4 231 aaKnown RBP12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Znrd1-asQ8R0E5 213 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Pstpip2Q99M15 334 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Galnt15Q9D2N8 638 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Arhgef7Q9ES28 862 aa12.64□□□□□ -0.39
Trim11-202ENSMUST00000108809 Lbhd1A0A087WPA0 259 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Zc3h7bF8VPP8 982 aaKnown RBP12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 AdkP55264 361 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 RelaQ04207 549 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Rapgef1Q3UHC1 1224 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Gm5935Q497S0 212 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Cacna2d4Q5RJF7 1116 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Kiaa0319Q5SZV5 1081 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Rnaseh2bQ80ZV0 308 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Ubiad1Q9DC60 336 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Klhdc7aA2APT9 773 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 ChkbO55229 394 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 H2afzP0C0S6 128 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 H2afvQ3THW5 128 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Fam193aQ8CGI1 1231 aaKnown RBP12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Coa7Q921H9 231 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Fam111aQ9D2L9 613 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Scgb2b7D3YYY1 112 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Sema4dO09126 861 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Nmt1O70310 496 aaKnown RBP12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Clul1Q3ZRW6 464 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Znf652Q5DU09 608 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Atp13a4Q5XF90 1193 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Rps6ka6Q7TPS0 764 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Phf8Q80TJ7 1023 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 RpainQ9CWY9 219 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Gfpt2Q9Z2Z9 682 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Cyp2ab1S4R196 498 aa12.63□□□□□ -0.39
Trim11-202ENSMUST00000108809 Barx2O08686 283 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Rad51bO35719 350 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Mucl2P02815 138 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 AcrbpQ3V140 540 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Pde1cQ64338 706 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Anks6Q6GQX6 883 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 P2ry10Q8BFU7 328 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Rnf187Q8BFX1 236 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 PpatQ8CIH9 517 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Ago4Q8CJF8 861 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 BlmhQ8R016 455 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Cdc42ep4Q9JM96 349 aaKnown RBP12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 GgcxQ9QYC7 757 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Gm28036V9GXJ1 658 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Mroh9G5E8L9 891 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Gm8298J3QPI0 401 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Flt3Q00342 1000 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Igf2bp2Q5SF07 592 aaKnown RBP12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Klra5Q60652 266 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Ppp2r5cQ60996 524 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Dydc1Q9D9T0 175 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Fthl17aQ9DAX0 182 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Myoz2Q9JJW5 264 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Gm28510A0A087WP28 240 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Eid1Q9DCR4 169 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Ankrd2Q9WV06 328 aa12.62□□□□□ -0.39
Trim11-202ENSMUST00000108809 Itgb4A2A863 1818 aa12.61□□□□□ -0.39
Trim11-202ENSMUST00000108809 GcP21614 476 aa12.61□□□□□ -0.39
Trim11-202ENSMUST00000108809 Gjc1P28229 396 aa12.61□□□□□ -0.39
Trim11-202ENSMUST00000108809 Apbb1ipQ8R5A3 670 aa12.61□□□□□ -0.39
Trim11-202ENSMUST00000108809 Hyou1Q9JKR6 999 aaKnown RBP12.61□□□□□ -0.39
Trim11-202ENSMUST00000108809 Pacsin2Q9WVE8 486 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms