RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 YwhagP61982 247 aaKnown RBP12.23□□□□□ -0.45
Chd3-202ENSMUST00000108661 Sorbs1Q62417 1290 aa12.23□□□□□ -0.45
Chd3-202ENSMUST00000108661 TdrkhQ80VL1 560 aa12.23□□□□□ -0.45
Chd3-202ENSMUST00000108661 Sf3b3Q921M3 1217 aaKnown RBP12.23□□□□□ -0.45
Chd3-202ENSMUST00000108661 Sept5Q9Z2Q6 369 aa12.23□□□□□ -0.45
Chd3-202ENSMUST00000108661 Pcsk1P63239 753 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 LRWD1Q8BUI3 648 aaKnown RBP12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Klhl11Q8CE33 709 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Rnf112Q96DY5 654 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Ophn1Q99J31 802 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Anapc7Q9WVM3 565 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Zbtb12Q9Z150 459 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Q3KNL4 93 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Atp11bQ6DFW5 1175 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Tubb2aQ7TMM9 445 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Cabs1Q8C633 391 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Tubb2bQ9CWF2 445 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Itsn2Q9Z0R6 1659 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Rab20P35295 233 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Cyp11b1Q3TG86 501 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Bzw1Q9CQC6 419 aaKnown RBP12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Rnf123Q5XPI3 1314 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 DgkhD3YXJ0 1156 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 SybuQ8BHS8 665 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Fam83aQ8K2P2 436 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Acvr1cQ8K348 493 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Xpo4Q9ESJ0 1151 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Cacna2d3Q9Z1L5 1091 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Gfpt2Q9Z2Z9 682 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Zfp174B9EJW5 407 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Aldh1a2Q62148 518 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Tcaf3Q6QR59 914 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Pan2Q8BGF7 1200 aaKnown RBP12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Zcchc8Q9CYA6 709 aaKnown RBP12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Tbc1d30Q69ZT9 766 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Spon2Q8BMS2 330 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Gjd4Q8BSD4 364 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Arhgap24Q8C4V1 747 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Eva1bQ8K2Y3 164 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Olfr711Q9EPG2 314 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Atp1a4Q9WV27 1032 aa12.22□□□□□ -0.45
Chd3-202ENSMUST00000108661 Tbkbp1A2A9T0 611 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Trmt1lA2RSY6 728 aaKnown RBP12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Zfp94E9Q6Y4 486 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Serpind1P49182 478 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Ccdc68Q8BVC4 333 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Bag5Q8CI32 447 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Irak4Q8R4K2 459 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Cadm1Q8R5M8 456 aaKnown RBP12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Serpina9Q9D7D2 418 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Cog8Q9JJA2 640 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Kif5aP33175 1027 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Rasgrf2P70392 1189 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Satb1Q60611 764 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Pcdhb14Q6PB90 796 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Rpap2Q8VC34 614 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Tubb5P99024 444 aaKnown RBP12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Mief2Q5NCS9 454 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 PrcpQ7TMR0 491 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Zfp397Q7TNK4 527 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Trim62Q80V85 475 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 HscbQ8K3A0 234 aa12.21□□□□□ -0.45
Chd3-202ENSMUST00000108661 Gbp6A0A0G2JDV3 611 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Znf568E9PYI1 671 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Gm43302L7N1X8 611 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Ect2Q07139 913 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Foxred2Q3USW5 665 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Ppp1r13bQ62415 1087 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Prr18Q6PAN7 307 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Snx17Q8BVL3 470 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Kiaa0391Q8JZY4 584 aaKnown RBP12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Spata2Q8K004 515 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Rnf6Q9DBU5 667 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 4930407I10RikD3Z5T8 1512 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Ces1bD3Z5G7 567 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Fam198bQ3UPI1 517 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Ccdc160Q3UYG1 323 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Yaf2Q99LW6 179 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Lsm7Q9CQQ8 103 aaKnown RBP12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Scnn1bQ9WU38 638 aa12.21□□□□□ -0.46
Chd3-202ENSMUST00000108661 Ism1A2ATD1 454 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Capn2O08529 700 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Cyb5r4Q3TDX8 528 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Fam8a1Q3URQ4 399 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Btnl4A2CG29 586 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Serpina3kP07759 418 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Slfnl1Q8BHW9 410 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Gnl3Q8CI11 538 aaKnown RBP12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Mfap3Q922T2 349 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Ubxn11Q9D572 484 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 A430078G23RikE9Q7Y4 484 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Zfp846G3X996 541 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 PrkcbP68404 671 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Parp3Q3ULW8 533 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Fam167aQ6P1G6 215 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Nudt16Q6P3D0 195 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Ddx18Q8K363 660 aaKnown RBP12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Rlbp1Q9Z275 317 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 AglF8VPN4 1532 aa12.2□□□□□ -0.46
Chd3-202ENSMUST00000108661 Krt26Q3TRJ4 462 aa12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms