RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Pcdha5Q91Y15 934 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Tjap1Q9DCD5 539 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 EgfrQ01279 1210 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Tex11Q14AT2 947 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 TraddQ3U0V2 310 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Tbc1d9bQ5SVR0 1263 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Iws1Q8C1D8 766 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Yipf1Q91VU1 306 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Calml4Q91WQ9 153 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 4931423N10RikQ9D4J9 382 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Prpf4Q9DAW6 521 aaKnown RBP12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Mms22lB1AUR6 1238 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 R3hdm1E9Q9Q2 1135 aaKnown RBP12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 AoahO35298 574 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Flt3Q00342 1000 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Akap4Q60662 849 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Krt15Q61414 452 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Srrm3Q80WV7 648 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Aldh5a1Q8BWF0 523 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Lrrc42Q8R2U7 421 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Ttll1Q91V51 423 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Ddah1Q9CWS0 285 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 RpainQ9CWY9 219 aa12.59□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Drc1Q3USS3 753 aa12.58□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Krt31Q61765 416 aa12.58□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Tm4sf1Q64302 202 aa12.58□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Galnt17Q7TT15 598 aa12.58□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Rint1Q8BZ36 792 aa12.58□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Rbm41Q8JZV4 413 aa12.58□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Sh2b2Q9JID9 621 aa12.58□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Nap1l5Q9JJF0 156 aa12.58□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Prkab1Q9R078 270 aa12.58□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Gm38392E9Q2A2 434 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gm8298J3QPI0 401 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Becn2P0DM65 447 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Serpina1bP22599 413 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Fbln2P37889 1221 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Senp1P59110 640 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Jdp2P97875 163 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Qrich1Q3UA37 777 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 TwistnbQ78WZ7 330 aaKnown RBP12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 PodnQ7TQ62 611 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 AdalQ80SY6 360 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Acad11Q80XL6 779 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Snip1Q8BIZ6 383 aaKnown RBP12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Lrrc45Q8CIM1 670 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Q91Z58 1206 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Fam111aQ9D2L9 613 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Inpp4aQ9EPW0 939 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Myoz2Q9JJW5 264 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Krt71Q9R0H5 524 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Cul1Q9WTX6 776 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Kif13bA0A286YCV9 1847 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gsg1l2M0QWL6 290 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Wdhd1P59328 1117 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Cyp2e1Q05421 493 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Mettl14Q3UIK4 456 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Atp13a4Q5XF90 1193 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ppp2r2aQ6P1F6 447 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Znf287Q9EQB9 759 aa12.58□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gm45261A0A1B0GSP6 197 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Fam171a1A2ATK9 892 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Pja1O55176 578 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gna14P30677 355 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Acot6Q32Q92 419 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gcfc2Q8BKT3 769 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Pym1Q8CHP5 203 aaKnown RBP12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Slf1Q8R3P9 1054 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Snx24Q9CRB0 169 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Cog1Q9Z160 980 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Armc3A2AU72 881 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Fam71aB7XG49 585 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Scgb2b7D3YYY1 112 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 TyrobpO54885 114 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Fam207aP58468 219 aaKnown RBP12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ice2Q3UZ18 988 aaKnown RBP12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Serpinb6Q60854 378 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Drd5Q8BLD9 478 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ccdc28aQ8CEI3 192 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Nup58Q8R332 587 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gpihbp1Q9D1N2 228 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 PlekQ9JHK5 350 aaKnown RBP12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Fmnl1Q9JL26 1094 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Kat6bQ8BRB7 1872 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Usp34Q6ZQ93 3582 aa12.57□□□□□ -0.4
Col9a1-202ENSMUST00000088349 DohhA0A1Y7VJ29 135 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Tnfrsf11aO35305 625 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Sin3bQ62141 1098 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ehbp1Q69ZW3 1231 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Bank1Q80VH0 783 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gpr180Q8BPS4 441 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Scfd2Q8BTY8 684 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Dnm1lQ8K1M6 742 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Sgms1Q8VCQ6 419 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Fam187aQ9D3R5 417 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Arhgef7Q9ES28 862 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Slc5a4aQ9ET37 656 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ddx20Q9JJY4 825 aaKnown RBP12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Skor2A7M7C7 1008 aa12.56□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Flvcr1B2RXV4 560 aa12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms