RNA–Protein interactions for RNA: snR3

snR3, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR3, Length 194 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR3	snR3	YGR168C	P53293	376 aa		4.55	□□□□□ -1.68
snR3	snR3	LGE1	Q02796	332 aa	Known RBP	4.55	□□□□□ -1.68
snR3	snR3	RVB1	Q03940	463 aa	Known RBP	4.55	□□□□□ -1.68
snR3	snR3	ASA1	Q06822	443 aa		4.55	□□□□□ -1.68
snR3	snR3	YPR022C	Q12139	1133 aa		4.55	□□□□□ -1.68
snR3	snR3	ORT1	Q12375	292 aa		4.55	□□□□□ -1.68
snR3	snR3	RRI1	Q12468	440 aa		4.55	□□□□□ -1.68
snR3	snR3	YLR111W	Q12528	110 aa		4.55	□□□□□ -1.68
snR3	snR3	TPK3	P05986	398 aa		4.54	□□□□□ -1.68
snR3	snR3	ATP1	P07251	545 aa	Known RBP	4.54	□□□□□ -1.68
snR3	snR3	MSF1	P08425	469 aa		4.54	□□□□□ -1.68
snR3	snR3	YAR066W	P0CX18	203 aa		4.54	□□□□□ -1.68
snR3	snR3	YHR214W	P0CX19	203 aa		4.54	□□□□□ -1.68
snR3	snR3	RPS16A	P0CX51	143 aa	Known RBP	4.54	□□□□□ -1.68
snR3	snR3	RPS16B	P0CX52	143 aa	Known RBP	4.54	□□□□□ -1.68
snR3	snR3	GPI12	P23797	304 aa		4.54	□□□□□ -1.68
snR3	snR3	MXR2	P25566	168 aa		4.54	□□□□□ -1.68
snR3	snR3	DEG1	P31115	442 aa	Known RBP	4.54	□□□□□ -1.68
snR3	snR3	ARO4	P32449	370 aa	Known RBP	4.54	□□□□□ -1.68
snR3	snR3	ERG1	P32476	496 aa	Known RBP	4.54	□□□□□ -1.68
snR3	snR3	IML3	P38265	245 aa		4.54	□□□□□ -1.68
snR3	snR3	OSH3	P38713	996 aa	Known RBP	4.54	□□□□□ -1.68
snR3	snR3	SEC9	P40357	651 aa		4.54	□□□□□ -1.68
snR3	snR3	SHQ1	P40486	507 aa	Predicted RBP	4.54	□□□□□ -1.68
snR3	snR3	YNL234W	P53857	426 aa		4.54	□□□□□ -1.68
snR3	snR3	BET5	Q03630	159 aa		4.54	□□□□□ -1.68
snR3	snR3	UBX2	Q04228	584 aa		4.54	□□□□□ -1.68
snR3	snR3	PFA4	Q12006	378 aa		4.54	□□□□□ -1.68
snR3	snR3	SLF1	Q12034	447 aa	Known RBP	4.54	□□□□□ -1.68
snR3	snR3	SIA1	Q12212	622 aa		4.54	□□□□□ -1.68
snR3	snR3	RRP12	Q12754	1228 aa	Known RBP	4.54	□□□□□ -1.68
snR3	snR3	SSK22	P25390	1331 aa	Predicted RBP	4.53	□□□□□ -1.68
snR3	snR3	HEM2	P05373	342 aa		4.53	□□□□□ -1.68
snR3	snR3	SPO12	P17123	173 aa		4.53	□□□□□ -1.68
snR3	snR3	YCR016W	P25617	290 aa	Known RBP	4.53	□□□□□ -1.68
snR3	snR3	MEI5	P32489	222 aa		4.53	□□□□□ -1.68
snR3	snR3	CYM1	P32898	989 aa		4.53	□□□□□ -1.68
snR3	snR3	VAM7	P32912	316 aa		4.53	□□□□□ -1.68
snR3	snR3	YCR041W	P37265	110 aa		4.53	□□□□□ -1.68
snR3	snR3	LEU5	P38702	357 aa		4.53	□□□□□ -1.68
snR3	snR3	COX16	P47081	118 aa		4.53	□□□□□ -1.68
snR3	snR3	PHB2	P50085	310 aa		4.53	□□□□□ -1.68
snR3	snR3	KAP114	P53067	1004 aa		4.53	□□□□□ -1.68
snR3	snR3	TIM21	P53220	239 aa		4.53	□□□□□ -1.68
snR3	snR3	GND2	P53319	492 aa		4.53	□□□□□ -1.68
snR3	snR3	SUN4	P53616	420 aa		4.53	□□□□□ -1.68
snR3	snR3	FRE4	P53746	719 aa		4.53	□□□□□ -1.68
snR3	snR3	SAM50	P53969	484 aa		4.53	□□□□□ -1.68
snR3	snR3	SPP2	Q02521	185 aa		4.53	□□□□□ -1.68
snR3	snR3	GTO3	Q04806	366 aa		4.53	□□□□□ -1.68
snR3	snR3	BNA5	Q05979	453 aa		4.53	□□□□□ -1.68
snR3	snR3	THI20	Q08224	551 aa		4.53	□□□□□ -1.68
snR3	snR3	CLP1	Q08685	445 aa	Predicted RBP	4.53	□□□□□ -1.68
snR3	snR3	PRP46	Q12417	451 aa	Predicted RBP	4.53	□□□□□ -1.68
snR3	snR3	YOR338W	Q99326	363 aa		4.53	□□□□□ -1.68
snR3	snR3	RAD7	P06779	565 aa		4.52	□□□□□ -1.69
snR3	snR3	SPO11	P23179	398 aa		4.52	□□□□□ -1.69
snR3	snR3	COQ3	P27680	312 aa		4.52	□□□□□ -1.69
snR3	snR3	SRB4	P32569	687 aa		4.52	□□□□□ -1.69
snR3	snR3	PRS1	P32895	427 aa	Known RBP	4.52	□□□□□ -1.69
snR3	snR3	MRPS5	P33759	307 aa		4.52	□□□□□ -1.69
snR3	snR3	MYO3	P36006	1272 aa		4.52	□□□□□ -1.69
snR3	snR3	YKL071W	P36086	256 aa		4.52	□□□□□ -1.69
snR3	snR3	YPK3	P38070	525 aa		4.52	□□□□□ -1.69
snR3	snR3	MMS21	P38632	267 aa		4.52	□□□□□ -1.69
snR3	snR3	HIS2	P38635	335 aa		4.52	□□□□□ -1.69
snR3	snR3	SIP3	P38717	1229 aa		4.52	□□□□□ -1.69
snR3	snR3	OTU1	P43558	301 aa		4.52	□□□□□ -1.69
snR3	snR3	FMP33	P46998	180 aa		4.52	□□□□□ -1.69
snR3	snR3	BIO3	P50277	480 aa		4.52	□□□□□ -1.69
snR3	snR3	NAT4	Q04751	285 aa		4.52	□□□□□ -1.69
snR3	snR3	ECI1	Q05871	280 aa		4.52	□□□□□ -1.69
snR3	snR3	GMC2	Q06201	188 aa		4.52	□□□□□ -1.69
snR3	snR3	CTS2	Q06350	511 aa		4.52	□□□□□ -1.69
snR3	snR3	SAM4	Q08985	325 aa	Known RBP	4.52	□□□□□ -1.69
snR3	snR3	SRL2	Q12020	392 aa		4.52	□□□□□ -1.69
snR3	snR3	UBA3	Q99344	299 aa		4.52	□□□□□ -1.69
snR3	snR3	PRB1	P09232	635 aa		4.51	□□□□□ -1.69
snR3	snR3	ARF2	P19146	181 aa	Known RBP	4.51	□□□□□ -1.69
snR3	snR3	URE2	P23202	354 aa	Known RBP	4.51	□□□□□ -1.69
snR3	snR3	YCR100C	P25606	316 aa		4.51	□□□□□ -1.69
snR3	snR3	ITR1	P30605	584 aa		4.51	□□□□□ -1.69
snR3	snR3	ACB1	P31787	87 aa		4.51	□□□□□ -1.69
snR3	snR3	KRE6	P32486	720 aa		4.51	□□□□□ -1.69
snR3	snR3	TOA2	P32774	122 aa		4.51	□□□□□ -1.69
snR3	snR3	FRE2	P36033	711 aa		4.51	□□□□□ -1.69
snR3	snR3	YAR1	P46683	200 aa		4.51	□□□□□ -1.69
snR3	snR3	TAF6	P53040	516 aa		4.51	□□□□□ -1.69
snR3	snR3	YGR117C	P53270	476 aa		4.51	□□□□□ -1.69
snR3	snR3	YNR048W	P53740	393 aa		4.51	□□□□□ -1.69
snR3	snR3	IRC15	Q02733	499 aa		4.51	□□□□□ -1.69
snR3	snR3	COX20	Q04935	205 aa		4.51	□□□□□ -1.69
snR3	snR3	SSQ1	Q05931	657 aa	Predicted RBP	4.51	□□□□□ -1.69
snR3	snR3	MRPL51	Q06090	140 aa	Predicted RBP	4.51	□□□□□ -1.69
snR3	snR3	VPS74	Q06385	345 aa		4.51	□□□□□ -1.69
snR3	snR3	BSC6	Q08280	497 aa		4.51	□□□□□ -1.69
snR3	snR3	YOP1	Q12402	180 aa		4.51	□□□□□ -1.69
snR3	snR3	YOS9	Q99220	542 aa		4.51	□□□□□ -1.69
snR3	snR3	JIP3	O13555	125 aa		4.5	□□□□□ -1.69
snR3	snR3	TEF1	P02994	458 aa	Known RBP	4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms