RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	SAN1	P22470	610 aa		2.61	□□□□□ -1.99
HAA1	YPR008W	VMA16	P23968	213 aa		2.61	□□□□□ -1.99
HAA1	YPR008W	CMK1	P27466	446 aa	Known RBP	2.61	□□□□□ -1.99
HAA1	YPR008W	CYM1	P32898	989 aa		2.61	□□□□□ -1.99
HAA1	YPR008W	PEX5	P35056	612 aa		2.61	□□□□□ -1.99
HAA1	YPR008W	PEP8	P40335	379 aa		2.61	□□□□□ -1.99
HAA1	YPR008W	YJL213W	P40896	331 aa		2.61	□□□□□ -1.99
HAA1	YPR008W	DLD2	P46681	530 aa	Known RBP	2.61	□□□□□ -1.99
HAA1	YPR008W	ASN2	P49090	572 aa	Known RBP	2.61	□□□□□ -1.99
HAA1	YPR008W	RCF2	P53721	224 aa		2.61	□□□□□ -1.99
HAA1	YPR008W	EFM6	P53970	246 aa		2.61	□□□□□ -1.99
HAA1	YPR008W	PIR3	Q03180	325 aa		2.61	□□□□□ -1.99
HAA1	YPR008W	CMS1	Q07897	291 aa	Known RBP	2.61	□□□□□ -1.99
HAA1	YPR008W	YPQ1	Q12010	308 aa		2.61	□□□□□ -1.99
HAA1	YPR008W	LDB17	Q12342	491 aa		2.61	□□□□□ -1.99
HAA1	YPR008W	OCA6	Q12454	224 aa		2.61	□□□□□ -1.99
HAA1	YPR008W	FUM1	P08417	488 aa	Known RBP	2.6	□□□□□ -1.99
HAA1	YPR008W	NOP1	P15646	327 aa	Known RBP	2.6	□□□□□ -1.99
HAA1	YPR008W	AAT2	P23542	418 aa	Known RBP	2.6	□□□□□ -1.99
HAA1	YPR008W	SEC14	P24280	304 aa	Known RBP	2.6	□□□□□ -1.99
HAA1	YPR008W	BUD5	P25300	642 aa	Predicted RBP	2.6	□□□□□ -1.99
HAA1	YPR008W	ADH7	P25377	361 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	NDI1	P32340	513 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	KAR9	P32526	644 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	MRE11	P32829	692 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	VPS17	P32913	551 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	YKL100C	P34248	587 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	YHI9	P38765	294 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	UFE1	P41834	346 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	LCL3	P53153	274 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	TRM112	P53738	135 aa	Predicted RBP	2.6	□□□□□ -1.99
HAA1	YPR008W	RNY1	Q02933	434 aa	Known RBP	2.6	□□□□□ -1.99
HAA1	YPR008W	YMR209C	Q03648	457 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	YKU80	Q04437	629 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	ERP1	Q05359	219 aa	Known RBP	2.6	□□□□□ -1.99
HAA1	YPR008W	CDC123	Q05791	360 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	YLR012C	Q07927	99 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	PGC1	Q08959	321 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	YPL225W	Q08971	146 aa	Known RBP	2.6	□□□□□ -1.99
HAA1	YPR008W	RGS2	Q99188	309 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	YPT6	Q99260	215 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	YLR422W	Q06409	1932 aa		2.6	□□□□□ -1.99
HAA1	YPR008W	PMR1	P13586	950 aa		2.59	□□□□□ -1.99
HAA1	YPR008W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
HAA1	YPR008W	RIM1	P32445	135 aa	Known RBP	2.59	□□□□□ -1.99
HAA1	YPR008W	COY1	P34237	679 aa		2.59	□□□□□ -1.99
HAA1	YPR008W	AUR1	P36107	401 aa	Predicted RBP	2.59	□□□□□ -1.99
HAA1	YPR008W	MRP21	P38175	177 aa		2.59	□□□□□ -1.99
HAA1	YPR008W	SEO1	P39709	593 aa		2.59	□□□□□ -1.99
HAA1	YPR008W	FAR3	P46671	204 aa		2.59	□□□□□ -1.99
HAA1	YPR008W	ARC1	P46672	376 aa	Known RBP	2.59	□□□□□ -1.99
HAA1	YPR008W	TRF5	P48561	642 aa	Known RBP	2.59	□□□□□ -1.99
HAA1	YPR008W	PRP24	P49960	444 aa	Known RBP	2.59	□□□□□ -1.99
HAA1	YPR008W	TIM13	P53299	105 aa		2.59	□□□□□ -1.99
HAA1	YPR008W	CDC14	Q00684	551 aa		2.59	□□□□□ -1.99
HAA1	YPR008W	SPC24	Q04477	213 aa		2.59	□□□□□ -1.99
HAA1	YPR008W	YLR177W	Q06251	628 aa		2.59	□□□□□ -1.99
HAA1	YPR008W	YOR387C	Q08910	206 aa		2.59	□□□□□ -1.99
HAA1	YPR008W	YMR030W-A	Q3E760	96 aa		2.59	□□□□□ -1.99
HAA1	YPR008W	CLN1	P20437	546 aa		2.59	□□□□□ -2
HAA1	YPR008W	RPC19	P28000	142 aa	Known RBP	2.59	□□□□□ -2
HAA1	YPR008W	PHA2	P32452	334 aa		2.59	□□□□□ -2
HAA1	YPR008W	PTR2	P32901	601 aa		2.59	□□□□□ -2
HAA1	YPR008W	SGE1	P33335	543 aa		2.59	□□□□□ -2
HAA1	YPR008W	ATG12	P38316	186 aa		2.59	□□□□□ -2
HAA1	YPR008W	PHO89	P38361	574 aa		2.59	□□□□□ -2
HAA1	YPR008W	RRP3	P38712	501 aa	Known RBP	2.59	□□□□□ -2
HAA1	YPR008W	YHR182W	P38870	785 aa		2.59	□□□□□ -2
HAA1	YPR008W	SEC28	P40509	296 aa	Known RBP	2.59	□□□□□ -2
HAA1	YPR008W	BUD13	P46947	266 aa	Predicted RBP	2.59	□□□□□ -2
HAA1	YPR008W	TMA22	P47089	198 aa	Predicted RBP	2.59	□□□□□ -2
HAA1	YPR008W	MEP3	P53390	489 aa		2.59	□□□□□ -2
HAA1	YPR008W	DUG3	P53871	357 aa		2.59	□□□□□ -2
HAA1	YPR008W	FMN1	Q03778	218 aa		2.59	□□□□□ -2
HAA1	YPR008W	TAF11	Q04226	346 aa		2.59	□□□□□ -2
HAA1	YPR008W	RTN1	Q04947	295 aa	Known RBP	2.59	□□□□□ -2
HAA1	YPR008W	LDB18	Q07887	179 aa		2.59	□□□□□ -2
HAA1	YPR008W	STE2	D6VTK4	431 aa		2.58	□□□□□ -2
HAA1	YPR008W	RAD3	P06839	778 aa		2.58	□□□□□ -2
HAA1	YPR008W	RNA1	P11745	407 aa	Known RBP	2.58	□□□□□ -2
HAA1	YPR008W	ARF2	P19146	181 aa	Known RBP	2.58	□□□□□ -2
HAA1	YPR008W	PPH22	P23595	377 aa		2.58	□□□□□ -2
HAA1	YPR008W	IMG1	P25626	169 aa		2.58	□□□□□ -2
HAA1	YPR008W	BEM1	P29366	551 aa		2.58	□□□□□ -2
HAA1	YPR008W	AEP1	P32493	518 aa		2.58	□□□□□ -2
HAA1	YPR008W	RFC3	P38629	340 aa		2.58	□□□□□ -2
HAA1	YPR008W	YDR089W	P38966	869 aa		2.58	□□□□□ -2
HAA1	YPR008W	CHS6	P40955	746 aa		2.58	□□□□□ -2
HAA1	YPR008W	SPG5	P42933	373 aa		2.58	□□□□□ -2
HAA1	YPR008W	BSC5	P53755	489 aa		2.58	□□□□□ -2
HAA1	YPR008W	CSN9	Q03981	162 aa		2.58	□□□□□ -2
HAA1	YPR008W	BNA5	Q05979	453 aa		2.58	□□□□□ -2
HAA1	YPR008W	SYO1	Q07395	620 aa		2.58	□□□□□ -2
HAA1	YPR008W	AHC1	Q12433	566 aa		2.58	□□□□□ -2
HAA1	YPR008W	RMD5	Q12508	421 aa		2.58	□□□□□ -2
HAA1	YPR008W	NOT5	Q12514	560 aa	Predicted RBP	2.58	□□□□□ -2
HAA1	YPR008W	EXO70	P19658	623 aa		2.57	□□□□□ -2
HAA1	YPR008W	MRPL8	P22353	238 aa		2.57	□□□□□ -2
HAA1	YPR008W	YCK1	P23291	538 aa		2.57	□□□□□ -2
HAA1	YPR008W	SNT1	P25357	1226 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms