RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	MET8	P15807	274 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	MER1	P16523	270 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	HPR1	P17629	752 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	DBF2	P22204	572 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	PXA2	P34230	853 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	MYO3	P36006	1272 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	ETR1	P38071	380 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	YBR139W	P38109	508 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	RFS1	P38234	210 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.89	□□□□□ -1.79	not detected
YTM1	YOR272W	GOS1	P38736	223 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	TRM5	P38793	499 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	YER034W	P40022	185 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	FMP32	P43557	207 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	SNG1	P46950	547 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	EMC2	P47133	292 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	SLT2	Q00772	484 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	SHR3	Q02774	210 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	MSC1	Q03104	513 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	MSS11	Q03825	758 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	ARX1	Q03862	593 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	URC2	Q04411	772 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	TDA9	Q04545	1251 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	SNX3	Q08826	162 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	AVL9	Q12500	764 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	YBR298C-A	Q8TGK4	73 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	BAR1	P12630	587 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	PDA1	P16387	420 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	CDC23	P16522	626 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	EXO70	P19658	623 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	ISY1	P21374	235 aa	Predicted RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	RRT12	P25381	491 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	YNK1	P36010	153 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	TCD2	P36101	447 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	PDX3	P38075	228 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	RCK2	P38623	610 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	SMC2	P38989	1170 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	SEO1	P39709	593 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	AZF1	P41696	914 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	YGR210C	P42942	411 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	DIE2	P50076	525 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	NAS6	P50086	228 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	RPT4	P53549	437 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	ARE2	P53629	642 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	RHO4	Q00246	291 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	MDM1	Q01846	1127 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	UTP6	Q02354	440 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	YDR476C	Q03362	224 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	PRP42	Q03776	544 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	DIS3	Q08162	1001 aa	Known RBP	3.89	□□□□□ -1.79
YTM1	YOR272W	RAX1	Q08760	435 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	YRM1	Q12340	786 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	FMP16	Q12497	93 aa		3.89	□□□□□ -1.79
YTM1	YOR272W	COR1	P07256	457 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	HXT2	P23585	541 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	SPB1	P25582	841 aa	Predicted RBP	3.88	□□□□□ -1.79
YTM1	YOR272W	PEX3	P28795	441 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	GPI10	P30777	616 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	ZIP1	P31111	875 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	ERG1	P32476	496 aa	Known RBP	3.88	□□□□□ -1.79
YTM1	YOR272W	TFB1	P32776	642 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	IMP3	P32899	183 aa	Predicted RBP	3.88	□□□□□ -1.79
YTM1	YOR272W	VPS17	P32913	551 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	NAT2	P37293	288 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	RIM2	P38127	377 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	SLX1	P38324	304 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	RRF1	P38771	230 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	PES4	P39684	611 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	DSE1	P40077	573 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	JLP2	P40206	208 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	ARF3	P40994	183 aa	RIP-Chip data	3.88	□□□□□ -1.79	not detected
YTM1	YOR272W	GUF1	P46943	645 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	DBP6	P53734	629 aa	Known RBP	3.88	□□□□□ -1.79
YTM1	YOR272W	TDA7	P53882	636 aa	Predicted RBP	3.88	□□□□□ -1.79
YTM1	YOR272W	IMP4	P53941	290 aa	Known RBP	3.88	□□□□□ -1.79
YTM1	YOR272W	SAM50	P53969	484 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	YPL014W	Q02606	381 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	RPN9	Q04062	393 aa	Known RBP	3.88	□□□□□ -1.79
YTM1	YOR272W	ARV1	Q06541	321 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	DTD1	Q07648	150 aa	Known RBP	3.88	□□□□□ -1.79
YTM1	YOR272W	YLL007C	Q07799	665 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	YPR022C	Q12139	1133 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	CSR2	Q12734	1121 aa		3.88	□□□□□ -1.79
YTM1	YOR272W	FLO11	P08640	1367 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	HIS4	P00815	799 aa	Known RBP	3.87	□□□□□ -1.79
YTM1	YOR272W	GLN3	P18494	730 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	OPI1	P21957	404 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	CMK2	P22517	447 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	PPZ1	P26570	692 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	YUR1	P26725	428 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	YBL010C	P32788	280 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	TAF14	P35189	244 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	GCS1	P35197	352 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	MAK5	P38112	773 aa	Predicted RBP	3.87	□□□□□ -1.79
YTM1	YOR272W	MMS21	P38632	267 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	MSR1	P38714	643 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	SPL2	P38839	148 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	YHR210C	P38893	341 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	RCY1	P39531	840 aa		3.87	□□□□□ -1.79
YTM1	YOR272W	YAT2	P40017	923 aa		3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms