RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W STN1P38960 494 aa3.53□□□□□ -1.84
VAM3YOR106W TCB2P48231 1178 aa3.53□□□□□ -1.84
VAM3YOR106W YGR117CP53270 476 aa3.53□□□□□ -1.84
VAM3YOR106W COS1P53822 381 aa3.53□□□□□ -1.84
VAM3YOR106W KTR6P54070 446 aa3.53□□□□□ -1.84
VAM3YOR106W SKI8Q02793 397 aaPredicted RBP3.53□□□□□ -1.84
VAM3YOR106W AIM32Q04689 311 aa3.53□□□□□ -1.84
VAM3YOR106W YPR091CQ06833 770 aa3.53□□□□□ -1.84
VAM3YOR106W ISA2Q12425 185 aa3.53□□□□□ -1.84
VAM3YOR106W PAB1P04147 577 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
VAM3YOR106W DBF4P32325 704 aa3.52□□□□□ -1.85
VAM3YOR106W SKT5P34226 696 aa3.52□□□□□ -1.85
VAM3YOR106W MCH1Q07376 486 aa3.52□□□□□ -1.85
VAM3YOR106W FOL3Q12676 427 aaPredicted RBP3.52□□□□□ -1.85
VAM3YOR106W CBP6P07253 162 aaPredicted RBP3.51□□□□□ -1.85
VAM3YOR106W PRB1P09232 635 aa3.51□□□□□ -1.85
VAM3YOR106W SSC1P0CS90 654 aaKnown RBP3.51□□□□□ -1.85
VAM3YOR106W ALG1P16661 449 aa3.51□□□□□ -1.85
VAM3YOR106W ZRC1P20107 442 aa3.51□□□□□ -1.85
VAM3YOR106W STP2P38704 541 aa3.51□□□□□ -1.85
VAM3YOR106W TRM112P53738 135 aaPredicted RBP3.51□□□□□ -1.85
VAM3YOR106W YDL114WQ07530 308 aa3.51□□□□□ -1.85
VAM3YOR106W FCY22Q12119 530 aa3.51□□□□□ -1.85
VAM3YOR106W ECM8P38246 354 aa3.5□□□□□ -1.85
VAM3YOR106W PFS1P38872 237 aa3.5□□□□□ -1.85
VAM3YOR106W FAD1P38913 306 aa3.5□□□□□ -1.85
VAM3YOR106W YGL262WP53054 175 aa3.5□□□□□ -1.85
VAM3YOR106W TPS1Q00764 495 aaKnown RBP3.5□□□□□ -1.85
VAM3YOR106W IES4Q08561 116 aa3.5□□□□□ -1.85
VAM3YOR106W MDH1P17505 334 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
VAM3YOR106W SLM5P25345 492 aaKnown RBP3.49□□□□□ -1.85
VAM3YOR106W DEP1P31385 405 aa3.49□□□□□ -1.85
VAM3YOR106W SLX1P38324 304 aa3.49□□□□□ -1.85
VAM3YOR106W ALD5P40047 520 aaKnown RBP3.49□□□□□ -1.85
VAM3YOR106W IGD1P43598 195 aa3.49□□□□□ -1.85
VAM3YOR106W AIP1P46680 615 aaKnown RBP3.49□□□□□ -1.85
VAM3YOR106W FLC3P53121 802 aa3.49□□□□□ -1.85
VAM3YOR106W YGR111WP53265 400 aa3.49□□□□□ -1.85
VAM3YOR106W YDR341CQ05506 607 aaKnown RBP3.49□□□□□ -1.85
VAM3YOR106W YLR456WQ06199 204 aa3.49□□□□□ -1.85
VAM3YOR106W ADH1P00330 348 aaKnown RBP3.48□□□□□ -1.85
VAM3YOR106W DPH2P32461 534 aa3.48□□□□□ -1.85
VAM3YOR106W GPI16P38875 610 aa3.48□□□□□ -1.85
VAM3YOR106W ATM1P40416 690 aa3.48□□□□□ -1.85
VAM3YOR106W YIP5P53108 310 aa3.48□□□□□ -1.85
VAM3YOR106W YGR018CP53211 109 aa3.48□□□□□ -1.85
VAM3YOR106W YLR345WQ06137 509 aa3.48□□□□□ -1.85
VAM3YOR106W NSE1Q07913 336 aa3.48□□□□□ -1.85
VAM3YOR106W PDE2P06776 526 aa3.47□□□□□ -1.85
VAM3YOR106W STE24P47154 453 aa3.47□□□□□ -1.85
VAM3YOR106W PGU1P47180 361 aa3.47□□□□□ -1.85
VAM3YOR106W DCI1Q08558 271 aa3.47□□□□□ -1.85
VAM3YOR106W YOP1Q12402 180 aa3.47□□□□□ -1.85
VAM3YOR106W PCL9Q12477 304 aa3.47□□□□□ -1.85
VAM3YOR106W TPK3P05986 398 aa3.46□□□□□ -1.86
VAM3YOR106W FUN26P31381 517 aa3.46□□□□□ -1.86
VAM3YOR106W DOA1P36037 715 aa3.46□□□□□ -1.86
VAM3YOR106W MCR1P36060 302 aaKnown RBP3.46□□□□□ -1.86
VAM3YOR106W SEC9P40357 651 aa3.46□□□□□ -1.86
VAM3YOR106W YPL107WQ02873 248 aa3.46□□□□□ -1.86
VAM3YOR106W YDL199CQ12407 687 aa3.46□□□□□ -1.86
VAM3YOR106W STE7P06784 515 aa3.45□□□□□ -1.86
VAM3YOR106W PHO91P27514 894 aa3.45□□□□□ -1.86
VAM3YOR106W NRP1P32770 719 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
VAM3YOR106W GPX2P38143 162 aa3.45□□□□□ -1.86
VAM3YOR106W PRP3Q03338 469 aaPredicted RBP3.45□□□□□ -1.86
VAM3YOR106W RNH203Q12338 110 aa3.45□□□□□ -1.86
VAM3YOR106W OPI3P05375 206 aa3.44□□□□□ -1.86
VAM3YOR106W ARF1P11076 181 aaKnown RBP3.44□□□□□ -1.86
VAM3YOR106W LTV1P34078 463 aa3.44□□□□□ -1.86
VAM3YOR106W MRPL27P36526 146 aaPredicted RBP3.44□□□□□ -1.86
VAM3YOR106W QDR3P38227 689 aa3.44□□□□□ -1.86
VAM3YOR106W GEP4P38812 185 aa3.44□□□□□ -1.86
VAM3YOR106W YFL012WP43580 148 aa3.44□□□□□ -1.86
VAM3YOR106W ROG1P53118 685 aa3.44□□□□□ -1.86
VAM3YOR106W UAF30Q08747 228 aa3.44□□□□□ -1.86
VAM3YOR106W HMS1Q12398 434 aa3.44□□□□□ -1.86
VAM3YOR106W FAB1P34756 2278 aa3.44□□□□□ -1.86
VAM3YOR106W PAC11P40960 533 aa3.43□□□□□ -1.86
VAM3YOR106W YMR010WQ03687 405 aa3.43□□□□□ -1.86
VAM3YOR106W RPL12AP0CX53 165 aaKnown RBP3.42□□□□□ -1.86
VAM3YOR106W RPL12BP0CX54 165 aa3.42□□□□□ -1.86
VAM3YOR106W CMK2P22517 447 aa3.42□□□□□ -1.86
VAM3YOR106W ZUO1P32527 433 aaKnown RBP3.42□□□□□ -1.86
VAM3YOR106W SPO23P33757 523 aa3.42□□□□□ -1.86
VAM3YOR106W TIR2P33890 251 aa3.42□□□□□ -1.86
VAM3YOR106W SOL2P37262 315 aa3.42□□□□□ -1.86
VAM3YOR106W LSM12P38828 187 aaKnown RBP3.42□□□□□ -1.86
VAM3YOR106W TRF5P48561 642 aaKnown RBP3.42□□□□□ -1.86
VAM3YOR106W TOS2P50078 622 aa3.42□□□□□ -1.86
VAM3YOR106W REX2P54964 269 aaKnown RBP3.42□□□□□ -1.86
VAM3YOR106W ECM7Q06200 448 aa3.42□□□□□ -1.86
VAM3YOR106W ASA1Q06822 443 aa3.42□□□□□ -1.86
VAM3YOR106W MEX67Q99257 599 aaKnown RBP3.42□□□□□ -1.86
VAM3YOR106W GIT1P25346 518 aa3.41□□□□□ -1.86
VAM3YOR106W BMT2P38278 337 aa3.41□□□□□ -1.86
VAM3YOR106W WSC4P38739 605 aa3.41□□□□□ -1.86
VAM3YOR106W YER184CP39961 794 aa3.41□□□□□ -1.86
VAM3YOR106W ENT5Q03769 411 aaKnown RBP3.41□□□□□ -1.86
VAM3YOR106W GPM3Q12326 303 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms