RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W HXT9P40885 567 aa2.97□□□□□ -1.93
MSH2YOL090W PAC11P40960 533 aa2.97□□□□□ -1.93
MSH2YOL090W TOS2P50078 622 aa2.97□□□□□ -1.93
MSH2YOL090W YGR151CP53287 111 aa2.97□□□□□ -1.93
MSH2YOL090W YTP1P53584 459 aa2.97□□□□□ -1.93
MSH2YOL090W YNL247WP53852 767 aaKnown RBP2.97□□□□□ -1.93
MSH2YOL090W HXT11P54862 567 aa2.97□□□□□ -1.93
MSH2YOL090W SPP2Q02521 185 aa2.97□□□□□ -1.93
MSH2YOL090W RIM13Q03792 727 aa2.97□□□□□ -1.93
MSH2YOL090W PLM2Q04383 521 aa2.97□□□□□ -1.93
MSH2YOL090W PDR8Q06149 701 aa2.97□□□□□ -1.93
MSH2YOL090W PIG1Q06216 648 aa2.97□□□□□ -1.93
MSH2YOL090W SYO1Q07395 620 aa2.97□□□□□ -1.93
MSH2YOL090W LSP1Q12230 341 aaKnown RBP2.97□□□□□ -1.93
MSH2YOL090W UBA3Q99344 299 aa2.97□□□□□ -1.93
MSH2YOL090W PSK1P31374 1356 aa2.96□□□□□ -1.93
MSH2YOL090W RHO1P06780 209 aaKnown RBP2.96□□□□□ -1.94
MSH2YOL090W CKA2P19454 339 aa2.96□□□□□ -1.94
MSH2YOL090W ATP11P32453 318 aa2.96□□□□□ -1.94
MSH2YOL090W ECM25P32525 599 aa2.96□□□□□ -1.94
MSH2YOL090W KAE1P36132 386 aa2.96□□□□□ -1.94
MSH2YOL090W RTC3P38804 111 aaPredicted RBP2.96□□□□□ -1.94
MSH2YOL090W BNA3P47039 444 aaKnown RBP2.96□□□□□ -1.94
MSH2YOL090W UBP8P50102 471 aa2.96□□□□□ -1.94
MSH2YOL090W RET3P53600 189 aa2.96□□□□□ -1.94
MSH2YOL090W CUS2P53830 285 aaPredicted RBP2.96□□□□□ -1.94
MSH2YOL090W EAF7P53911 425 aaKnown RBP2.96□□□□□ -1.94
MSH2YOL090W TRS23Q03784 219 aa2.96□□□□□ -1.94
MSH2YOL090W GIM5Q04493 163 aa2.96□□□□□ -1.94
MSH2YOL090W YOR365CQ08844 703 aa2.96□□□□□ -1.94
MSH2YOL090W BTS1Q12051 335 aa2.96□□□□□ -1.94
MSH2YOL090W OPI3P05375 206 aa2.96□□□□□ -1.94
MSH2YOL090W RPL12AP0CX53 165 aaKnown RBP2.96□□□□□ -1.94
MSH2YOL090W RPL12BP0CX54 165 aa2.96□□□□□ -1.94
MSH2YOL090W RNR3P21672 869 aaKnown RBP2.96□□□□□ -1.94
MSH2YOL090W PBN1P25580 416 aa2.96□□□□□ -1.94
MSH2YOL090W ADE1P27616 306 aa2.96□□□□□ -1.94
MSH2YOL090W MSN2P33748 704 aa2.96□□□□□ -1.94
MSH2YOL090W THI80P35202 319 aa2.96□□□□□ -1.94
MSH2YOL090W DSE1P40077 573 aa2.96□□□□□ -1.94
MSH2YOL090W LCP5P40079 357 aaPredicted RBP2.96□□□□□ -1.94
MSH2YOL090W SLM1P40485 686 aa2.96□□□□□ -1.94
MSH2YOL090W CDC1P40986 491 aa2.96□□□□□ -1.94
MSH2YOL090W YJL163CP46996 555 aa2.96□□□□□ -1.94
MSH2YOL090W LOH1P47055 219 aa2.96□□□□□ -1.94
MSH2YOL090W RIM8P53179 542 aa2.96□□□□□ -1.94
MSH2YOL090W MUK1Q02866 612 aa2.96□□□□□ -1.94
MSH2YOL090W MMT1Q03218 510 aa2.96□□□□□ -1.94
MSH2YOL090W EMI2Q04409 500 aaKnown RBP2.96□□□□□ -1.94
MSH2YOL090W ARO10Q06408 635 aa2.96□□□□□ -1.94
MSH2YOL090W GRS2Q06817 618 aa2.96□□□□□ -1.94
MSH2YOL090W THP1Q08231 455 aa2.96□□□□□ -1.94
MSH2YOL090W FIG2P25653 1609 aa2.95□□□□□ -1.94
MSH2YOL090W ATP1P07251 545 aaKnown RBP2.95□□□□□ -1.94
MSH2YOL090W TKL1P23254 680 aaKnown RBP2.95□□□□□ -1.94
MSH2YOL090W YKL097CP34245 136 aa2.95□□□□□ -1.94
MSH2YOL090W DBP8P38719 431 aa2.95□□□□□ -1.94
MSH2YOL090W BIG1P38813 335 aa2.95□□□□□ -1.94
MSH2YOL090W ERG10P41338 398 aaKnown RBP2.95□□□□□ -1.94
MSH2YOL090W SAD1P43589 448 aa2.95□□□□□ -1.94
MSH2YOL090W YJR011CP47086 261 aaPredicted RBP2.95□□□□□ -1.94
MSH2YOL090W FMP30Q02883 468 aa2.95□□□□□ -1.94
MSH2YOL090W IZH1Q03419 316 aa2.95□□□□□ -1.94
MSH2YOL090W AIM33Q04516 312 aa2.95□□□□□ -1.94
MSH2YOL090W YLR040CQ07988 224 aa2.95□□□□□ -1.94
MSH2YOL090W RPP2AP05319 106 aaKnown RBP2.95□□□□□ -1.94
MSH2YOL090W IMA3P0CW40 589 aa2.95□□□□□ -1.94
MSH2YOL090W IMA4P0CW41 589 aa2.95□□□□□ -1.94
MSH2YOL090W MSK1P32048 576 aa2.95□□□□□ -1.94
MSH2YOL090W PRO3P32263 286 aaKnown RBP2.95□□□□□ -1.94
MSH2YOL090W MAK5P38112 773 aaPredicted RBP2.95□□□□□ -1.94
MSH2YOL090W MAL32P38158 584 aa2.95□□□□□ -1.94
MSH2YOL090W LDB7P38210 180 aa2.95□□□□□ -1.94
MSH2YOL090W BUD32P53323 261 aa2.95□□□□□ -1.94
MSH2YOL090W MAL12P53341 584 aa2.95□□□□□ -1.94
MSH2YOL090W TRM112P53738 135 aaPredicted RBP2.95□□□□□ -1.94
MSH2YOL090W RPM2Q02773 1202 aa2.95□□□□□ -1.94
MSH2YOL090W CDA2Q06703 312 aa2.95□□□□□ -1.94
MSH2YOL090W CMS1Q07897 291 aaKnown RBP2.95□□□□□ -1.94
MSH2YOL090W PAM18Q07914 168 aa2.95□□□□□ -1.94
MSH2YOL090W IMA2Q08295 589 aa2.95□□□□□ -1.94
MSH2YOL090W GRE1Q08969 168 aa2.95□□□□□ -1.94
MSH2YOL090W ADE6P38972 1358 aaKnown RBP2.95□□□□□ -1.94
MSH2YOL090W YER145C-AA0A023PYF4 145 aa2.94□□□□□ -1.94
MSH2YOL090W TRP4P07285 380 aaPredicted RBP2.94□□□□□ -1.94
MSH2YOL090W ZRC1P20107 442 aa2.94□□□□□ -1.94
MSH2YOL090W CKI1P20485 582 aa2.94□□□□□ -1.94
MSH2YOL090W PEX3P28795 441 aa2.94□□□□□ -1.94
MSH2YOL090W SHP1P34223 423 aa2.94□□□□□ -1.94
MSH2YOL090W PCF11P39081 626 aaPredicted RBP2.94□□□□□ -1.94
MSH2YOL090W HIT1P46973 164 aa2.94□□□□□ -1.94
MSH2YOL090W STB4P50104 949 aa2.94□□□□□ -1.94
MSH2YOL090W KAP114P53067 1004 aa2.94□□□□□ -1.94
MSH2YOL090W ZPR1P53303 486 aaKnown RBP2.94□□□□□ -1.94
MSH2YOL090W MTQ1P53944 314 aa2.94□□□□□ -1.94
MSH2YOL090W COQ11Q05892 277 aa2.94□□□□□ -1.94
MSH2YOL090W YLR224WQ05947 369 aa2.94□□□□□ -1.94
MSH2YOL090W RAD34Q06665 692 aa2.94□□□□□ -1.94
MSH2YOL090W CMC2Q3E7A4 109 aa2.94□□□□□ -1.94
MSH2YOL090W FSH3Q99369 266 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms