RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A FUN26P31381 517 aa0.78□□□□□ -2.28
YMR172C-AYMR172C-A YPS1P32329 569 aa0.78□□□□□ -2.28
YMR172C-AYMR172C-A SMP1P38128 452 aa0.78□□□□□ -2.28
YMR172C-AYMR172C-A MMS4P38257 691 aa0.78□□□□□ -2.28
YMR172C-AYMR172C-A NTC20P38302 140 aaPredicted RBP0.78□□□□□ -2.28
YMR172C-AYMR172C-A LSM12P38828 187 aaKnown RBP0.78□□□□□ -2.28
YMR172C-AYMR172C-A MET18P40469 1032 aa0.78□□□□□ -2.28
YMR172C-AYMR172C-A COS4P43542 379 aa0.78□□□□□ -2.28
YMR172C-AYMR172C-A MMT1Q03218 510 aa0.78□□□□□ -2.28
YMR172C-AYMR172C-A COG4Q06096 861 aa0.78□□□□□ -2.28
YMR172C-AYMR172C-A IMA2Q08295 589 aa0.78□□□□□ -2.28
YMR172C-AYMR172C-A BUG1Q12191 341 aa0.78□□□□□ -2.28
YMR172C-AYMR172C-A PCL9Q12477 304 aa0.78□□□□□ -2.28
YMR172C-AYMR172C-A POM152P39685 1337 aa0.78□□□□□ -2.28
YMR172C-AYMR172C-A CKA2P19454 339 aa0.77□□□□□ -2.29
YMR172C-AYMR172C-A SKG6P32900 734 aaPredicted RBP0.77□□□□□ -2.29
YMR172C-AYMR172C-A ATG12P38316 186 aa0.77□□□□□ -2.29
YMR172C-AYMR172C-A RRT13P40042 185 aa0.77□□□□□ -2.29
YMR172C-AYMR172C-A TRF5P48561 642 aaKnown RBP0.77□□□□□ -2.29
YMR172C-AYMR172C-A NRM1P53718 249 aa0.77□□□□□ -2.29
YMR172C-AYMR172C-A RNH201P53942 307 aa0.77□□□□□ -2.29
YMR172C-AYMR172C-A PRP38Q00723 242 aaPredicted RBP0.77□□□□□ -2.29
YMR172C-AYMR172C-A YMR010WQ03687 405 aa0.77□□□□□ -2.29
YMR172C-AYMR172C-A YMR155WQ03795 547 aa0.77□□□□□ -2.29
YMR172C-AYMR172C-A URH1Q04179 340 aa0.77□□□□□ -2.29
YMR172C-AYMR172C-A YLR177WQ06251 628 aa0.77□□□□□ -2.29
YMR172C-AYMR172C-A DIS3Q08162 1001 aaKnown RBP0.77□□□□□ -2.29
YMR172C-AYMR172C-A YOL085CQ99345 113 aa0.77□□□□□ -2.29
YMR172C-AYMR172C-A ATP1P07251 545 aaKnown RBP0.76□□□□□ -2.29
YMR172C-AYMR172C-A DAL5P15365 543 aa0.76□□□□□ -2.29
YMR172C-AYMR172C-A TRX2P22803 104 aaKnown RBP0.76□□□□□ -2.29
YMR172C-AYMR172C-A TOA1P32773 286 aa0.76□□□□□ -2.29
YMR172C-AYMR172C-A FRM2P37261 193 aa0.76□□□□□ -2.29
YMR172C-AYMR172C-A YBR241CP38142 488 aa0.76□□□□□ -2.29
YMR172C-AYMR172C-A TRM112P53738 135 aaPredicted RBP0.76□□□□□ -2.29
YMR172C-AYMR172C-A JJJ1P53863 590 aa0.76□□□□□ -2.29
YMR172C-AYMR172C-A RGM1Q00453 211 aa0.76□□□□□ -2.29
YMR172C-AYMR172C-A MSC3Q05812 728 aa0.76□□□□□ -2.29
YMR172C-AYMR172C-A YDR056CQ12025 205 aa0.76□□□□□ -2.29
YMR172C-AYMR172C-A DBF4P32325 704 aa0.75□□□□□ -2.29
YMR172C-AYMR172C-A SPS19P32573 292 aaKnown RBP0.75□□□□□ -2.29
YMR172C-AYMR172C-A COS5P47187 383 aa0.75□□□□□ -2.29
YMR172C-AYMR172C-A SEH1P53011 349 aaKnown RBP0.75□□□□□ -2.29
YMR172C-AYMR172C-A YGL138CP53122 345 aa0.75□□□□□ -2.29
YMR172C-AYMR172C-A COS1P53822 381 aa0.75□□□□□ -2.29
YMR172C-AYMR172C-A REX2P54964 269 aaKnown RBP0.75□□□□□ -2.29
YMR172C-AYMR172C-A VTI1Q04338 217 aa0.75□□□□□ -2.29
YMR172C-AYMR172C-A YHC1Q05900 231 aaKnown RBP0.75□□□□□ -2.29
YMR172C-AYMR172C-A ASA1Q06822 443 aa0.75□□□□□ -2.29
YMR172C-AYMR172C-A COS7Q07788 383 aa0.75□□□□□ -2.29
YMR172C-AYMR172C-A FLO11P08640 1367 aa0.74□□□□□ -2.29
YMR172C-AYMR172C-A CLC1P17891 233 aa0.74□□□□□ -2.29
YMR172C-AYMR172C-A SKT5P34226 696 aa0.74□□□□□ -2.29
YMR172C-AYMR172C-A SDH4P37298 181 aa0.74□□□□□ -2.29
YMR172C-AYMR172C-A VID27P40157 782 aa0.74□□□□□ -2.29
YMR172C-AYMR172C-A ARF3P40994 183 aaRIP-Chip data0.74□□□□□ -2.29not detected
YMR172C-AYMR172C-A SPR6Q01684 191 aa0.74□□□□□ -2.29
YMR172C-AYMR172C-A MIX17Q03667 156 aa0.74□□□□□ -2.29
YMR172C-AYMR172C-A YDR131CQ03899 556 aa0.74□□□□□ -2.29
YMR172C-AYMR172C-A CDD1Q06549 142 aa0.74□□□□□ -2.29
YMR172C-AYMR172C-A BEM2P39960 2167 aaKnown RBP0.73□□□□□ -2.29
YMR172C-AYMR172C-A ARG3P05150 338 aa0.73□□□□□ -2.29
YMR172C-AYMR172C-A RPS18AP0CX55 146 aaKnown RBP0.73□□□□□ -2.29
YMR172C-AYMR172C-A RPS18BP0CX56 146 aaPredicted RBP0.73□□□□□ -2.29
YMR172C-AYMR172C-A SNF6P18888 332 aa0.73□□□□□ -2.29
YMR172C-AYMR172C-A URA4P20051 364 aa0.73□□□□□ -2.29
YMR172C-AYMR172C-A MKK1P32490 508 aa0.73□□□□□ -2.29
YMR172C-AYMR172C-A RAD23P32628 398 aaKnown RBP0.73□□□□□ -2.29
YMR172C-AYMR172C-A ALK2P32789 676 aaPredicted RBP0.73□□□□□ -2.29
YMR172C-AYMR172C-A TKL2P33315 681 aa0.73□□□□□ -2.29
YMR172C-AYMR172C-A SPO23P33757 523 aa0.73□□□□□ -2.29
YMR172C-AYMR172C-A DBP7P36120 742 aaKnown RBP0.73□□□□□ -2.29
YMR172C-AYMR172C-A SMF1P38925 575 aa0.73□□□□□ -2.29
YMR172C-AYMR172C-A MMF1P40185 145 aaKnown RBP0.73□□□□□ -2.29
YMR172C-AYMR172C-A BIO3P50277 480 aa0.73□□□□□ -2.29
YMR172C-AYMR172C-A NBP1P52919 319 aaPredicted RBP0.73□□□□□ -2.29
YMR172C-AYMR172C-A MRX11Q03079 207 aa0.73□□□□□ -2.29
YMR172C-AYMR172C-A SFM1Q12314 213 aa0.73□□□□□ -2.29
YMR172C-AYMR172C-A STE2D6VTK4 431 aa0.72□□□□□ -2.29
YMR172C-AYMR172C-A PAB1P04147 577 aaKnown RBP RIP-Chip data0.72□□□□□ -2.29not detected
YMR172C-AYMR172C-A SSC1P0CS90 654 aaKnown RBP0.72□□□□□ -2.29
YMR172C-AYMR172C-A RPS23AP0CX29 145 aaKnown RBP0.72□□□□□ -2.29
YMR172C-AYMR172C-A RPS23BP0CX30 145 aa0.72□□□□□ -2.29
YMR172C-AYMR172C-A GEX1P25596 615 aa0.72□□□□□ -2.29
YMR172C-AYMR172C-A BRF1P29056 596 aa0.72□□□□□ -2.29
YMR172C-AYMR172C-A LDS1P31379 325 aa0.72□□□□□ -2.29
YMR172C-AYMR172C-A COS9P36034 407 aa0.72□□□□□ -2.29
YMR172C-AYMR172C-A SHE3P38272 425 aaKnown RBP0.72□□□□□ -2.29
YMR172C-AYMR172C-A UTP9P38882 575 aaKnown RBP0.72□□□□□ -2.29
YMR172C-AYMR172C-A YGR117CP53270 476 aa0.72□□□□□ -2.29
YMR172C-AYMR172C-A VAC7P53950 1165 aa0.72□□□□□ -2.29
YMR172C-AYMR172C-A RPA49Q01080 415 aaPredicted RBP0.72□□□□□ -2.29
YMR172C-AYMR172C-A SNT309Q06091 175 aaPredicted RBP0.72□□□□□ -2.29
YMR172C-AYMR172C-A LDS2Q08218 356 aa0.72□□□□□ -2.29
YMR172C-AYMR172C-A YOR376WQ08900 122 aa0.72□□□□□ -2.29
YMR172C-AYMR172C-A MCT1Q12283 360 aa0.72□□□□□ -2.29
YMR172C-AYMR172C-A HIF1Q12373 385 aa0.72□□□□□ -2.29
YMR172C-AYMR172C-A YAL067W-AQ8TGK6 75 aa0.72□□□□□ -2.29
YMR172C-AYMR172C-A ADE4P04046 510 aaKnown RBP0.71□□□□□ -2.3
YMR172C-AYMR172C-A DST1P07273 309 aa0.71□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms