RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C SLF1Q12034 447 aaKnown RBP4.39□□□□□ -1.71
EAR1YMR171C MHF1Q3E835 90 aa4.39□□□□□ -1.71
EAR1YMR171C RAD7P06779 565 aa4.38□□□□□ -1.71
EAR1YMR171C ADE5,7P07244 802 aaKnown RBP4.38□□□□□ -1.71
EAR1YMR171C HEM1P09950 548 aaPredicted RBP4.38□□□□□ -1.71
EAR1YMR171C YKL100CP34248 587 aa4.38□□□□□ -1.71
EAR1YMR171C VPS21P36017 210 aaKnown RBP4.38□□□□□ -1.71
EAR1YMR171C DRE2P36152 348 aa4.38□□□□□ -1.71
EAR1YMR171C YBR139WP38109 508 aa4.38□□□□□ -1.71
EAR1YMR171C UME6P39001 836 aa4.38□□□□□ -1.71
EAR1YMR171C RGI2P40188 164 aa4.38□□□□□ -1.71
EAR1YMR171C SYG1P40528 902 aa4.38□□□□□ -1.71
EAR1YMR171C IST3P40565 148 aaPredicted RBP4.38□□□□□ -1.71
EAR1YMR171C FAR7P43592 221 aa4.38□□□□□ -1.71
EAR1YMR171C GTO1P48239 356 aa4.38□□□□□ -1.71
EAR1YMR171C NAS6P50086 228 aa4.38□□□□□ -1.71
EAR1YMR171C IMD4P50094 524 aaKnown RBP4.38□□□□□ -1.71
EAR1YMR171C YGR079WP53249 370 aa4.38□□□□□ -1.71
EAR1YMR171C CLD1P53264 445 aa4.38□□□□□ -1.71
EAR1YMR171C CSL4P53859 292 aaPredicted RBP4.38□□□□□ -1.71
EAR1YMR171C RSC9Q03124 581 aa4.38□□□□□ -1.71
EAR1YMR171C YMR099CQ03161 297 aaKnown RBP4.38□□□□□ -1.71
EAR1YMR171C GAL83Q04739 417 aa4.38□□□□□ -1.71
EAR1YMR171C BCH1Q05029 724 aa4.38□□□□□ -1.71
EAR1YMR171C MRI1Q06489 411 aaKnown RBP4.38□□□□□ -1.71
EAR1YMR171C MDM36Q06820 579 aa4.38□□□□□ -1.71
EAR1YMR171C YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
EAR1YMR171C UIP4Q08926 304 aa4.38□□□□□ -1.71
EAR1YMR171C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71 RIP-Chip
EAR1YMR171C PRS5Q12265 496 aaKnown RBP4.38□□□□□ -1.71
EAR1YMR171C RPL6BP05739 176 aaKnown RBP4.38□□□□□ -1.71
EAR1YMR171C CDC31P06704 161 aaKnown RBP4.38□□□□□ -1.71
EAR1YMR171C TY2A-LR1P0C2J4 438 aa4.38□□□□□ -1.71
EAR1YMR171C TY2A-FP0CX61 438 aa4.38□□□□□ -1.71
EAR1YMR171C TY2A-GR2P0CX62 438 aa4.38□□□□□ -1.71
EAR1YMR171C CBS2P14905 389 aa4.38□□□□□ -1.71
EAR1YMR171C CLN1P20437 546 aa4.38□□□□□ -1.71
EAR1YMR171C TY2A-CP25383 438 aa4.38□□□□□ -1.71
EAR1YMR171C YCR099CP25657 155 aa4.38□□□□□ -1.71
EAR1YMR171C PPZ1P26570 692 aa4.38□□□□□ -1.71
EAR1YMR171C YJU2P28320 278 aaPredicted RBP4.38□□□□□ -1.71
EAR1YMR171C MCM10P32354 571 aa4.38□□□□□ -1.71
EAR1YMR171C MEI5P32489 222 aa4.38□□□□□ -1.71
EAR1YMR171C IMP3P32899 183 aaPredicted RBP4.38□□□□□ -1.71
EAR1YMR171C CSE2P33308 149 aa4.38□□□□□ -1.71
EAR1YMR171C GDH2P33327 1092 aaKnown RBP4.38□□□□□ -1.71
EAR1YMR171C TEF4P36008 412 aaKnown RBP4.38□□□□□ -1.71
EAR1YMR171C RCN1P36054 211 aa4.38□□□□□ -1.71
EAR1YMR171C URA8P38627 578 aaPredicted RBP4.38□□□□□ -1.71
EAR1YMR171C SRP72P38688 640 aaKnown RBP4.38□□□□□ -1.71
EAR1YMR171C EFM1P38732 585 aa4.38□□□□□ -1.71
EAR1YMR171C DHH1P39517 506 aaKnown RBP4.38□□□□□ -1.71
EAR1YMR171C JLP2P40206 208 aa4.38□□□□□ -1.71
EAR1YMR171C AYR1P40471 297 aa4.38□□□□□ -1.71
EAR1YMR171C OPT1P40897 799 aa4.38□□□□□ -1.71
EAR1YMR171C AIM23P47015 356 aa4.38□□□□□ -1.71
EAR1YMR171C PET130P47065 347 aa4.38□□□□□ -1.71
EAR1YMR171C SHY1P53266 389 aa4.38□□□□□ -1.71
EAR1YMR171C NUP100Q02629 959 aa4.38□□□□□ -1.71
EAR1YMR171C FMP30Q02883 468 aa4.38□□□□□ -1.71
EAR1YMR171C TY2A-DR2Q03483 438 aa4.38□□□□□ -1.71
EAR1YMR171C GOT1Q03554 138 aa4.38□□□□□ -1.71
EAR1YMR171C APC4Q04601 652 aa4.38□□□□□ -1.71
EAR1YMR171C RIF2Q06208 395 aa4.38□□□□□ -1.71
EAR1YMR171C VTA1Q06263 330 aa4.38□□□□□ -1.71
EAR1YMR171C MED2Q12124 431 aa4.38□□□□□ -1.71
EAR1YMR171C TY2A-BQ12260 438 aa4.38□□□□□ -1.71
EAR1YMR171C TY2A-OR2Q12293 438 aa4.38□□□□□ -1.71
EAR1YMR171C SCM3Q12334 223 aa4.38□□□□□ -1.71
EAR1YMR171C TY2A-DR1Q12392 438 aa4.38□□□□□ -1.71
EAR1YMR171C TY2A-OR1Q12439 438 aa4.38□□□□□ -1.71
EAR1YMR171C MHF2Q3E829 80 aa4.38□□□□□ -1.71
EAR1YMR171C TY2A-DR3Q99303 438 aa4.38□□□□□ -1.71
EAR1YMR171C YMR084WA2P2R3 262 aa4.37□□□□□ -1.71
EAR1YMR171C MRP13P12686 339 aa4.37□□□□□ -1.71
EAR1YMR171C RER1P25560 188 aa4.37□□□□□ -1.71
EAR1YMR171C CMK1P27466 446 aaKnown RBP4.37□□□□□ -1.71
EAR1YMR171C NTG1P31378 399 aa4.37□□□□□ -1.71
EAR1YMR171C SIP1P32578 815 aa4.37□□□□□ -1.71
EAR1YMR171C PPZ2P33329 710 aa4.37□□□□□ -1.71
EAR1YMR171C RPS1AP33442 255 aaKnown RBP4.37□□□□□ -1.71
EAR1YMR171C ECM8P38246 354 aa4.37□□□□□ -1.71
EAR1YMR171C YHL026CP38740 315 aa4.37□□□□□ -1.71
EAR1YMR171C EXO1P39875 702 aa4.37□□□□□ -1.71
EAR1YMR171C YER010CP40011 234 aa4.37□□□□□ -1.71
EAR1YMR171C RGI1P40043 161 aaPredicted RBP4.37□□□□□ -1.71
EAR1YMR171C ESL1P40456 1118 aa4.37□□□□□ -1.71
EAR1YMR171C SNG1P46950 547 aa4.37□□□□□ -1.71
EAR1YMR171C EFM3P47163 339 aa4.37□□□□□ -1.71
EAR1YMR171C MRX6P48564 524 aa4.37□□□□□ -1.71
EAR1YMR171C STR3P53101 465 aaKnown RBP4.37□□□□□ -1.71
EAR1YMR171C MEP3P53390 489 aa4.37□□□□□ -1.71
EAR1YMR171C YMR010WQ03687 405 aa4.37□□□□□ -1.71
EAR1YMR171C RRP17Q04031 235 aaPredicted RBP4.37□□□□□ -1.71
EAR1YMR171C ECM11Q04110 302 aa4.37□□□□□ -1.71
EAR1YMR171C PLM2Q04383 521 aa4.37□□□□□ -1.71
EAR1YMR171C RCO1Q04779 684 aa4.37□□□□□ -1.71
EAR1YMR171C NEJ1Q06148 342 aa4.37□□□□□ -1.71
EAR1YMR171C YLL007CQ07799 665 aa4.37□□□□□ -1.71
EAR1YMR171C GLE1Q12315 538 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms