RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B TDH3P00359 332 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
YLR227W-BYLR227W-B FLP1P03870 423 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B HNM1P19807 563 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B KGD1P20967 1014 aaKnown RBP3.21□□□□□ -1.9
YLR227W-BYLR227W-B SCO2P38072 301 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B YEL073CP39974 107 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B YIL086CP40503 102 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B YGR111WP53265 400 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B YKR005CQ02203 525 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B RSM28Q03430 361 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B RAD30Q04049 632 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B YBR126W-AQ8TGU7 68 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B COX5AP00424 153 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B CSG2P35206 410 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B PBP2P38151 413 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
YLR227W-BYLR227W-B SWC5P38326 303 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B SCC4P40090 624 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B SNG1P46950 547 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B RSM23Q01163 450 aa3.21□□□□□ -1.9
YLR227W-BYLR227W-B NBA1Q08229 501 aaKnown RBP3.21□□□□□ -1.9
YLR227W-BYLR227W-B CHS1P08004 1131 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B COS2P0CX12 379 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B COS3P0CX13 379 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B APN1P22936 367 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B STP22P25604 385 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B MLH1P38920 769 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B ICE2P40499 491 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B COS4P43542 379 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B TRS85P46944 698 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B SCW11P53189 542 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B MRS2Q01926 470 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B RPC11Q04307 110 aaPredicted RBP3.2□□□□□ -1.9
YLR227W-BYLR227W-B MET17P06106 444 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B YER190C-BP0CX94 160 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B YEL077W-AP0CX95 160 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B YGR296C-BP0CX96 160 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B YPL283W-BP0CX97 160 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B YPR204C-AP0CX98 160 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B YFL068WP0CX99 160 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B YLL066W-AP0CY00 160 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B YLL067W-AP0CY01 160 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B SPS100P13130 326 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B DMC1P25453 334 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B RIM1P32445 135 aaKnown RBP3.2□□□□□ -1.9
YLR227W-BYLR227W-B RPS20P38701 121 aaKnown RBP3.2□□□□□ -1.9
YLR227W-BYLR227W-B SPG5P42933 373 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B HAP5Q02516 242 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B TPK1P06244 397 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B VPS33P20795 691 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B CTR86P25355 563 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B SSE2P32590 693 aaKnown RBP3.2□□□□□ -1.9
YLR227W-BYLR227W-B AFR1P33304 620 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B YOR365CQ08844 703 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B GPB1Q08886 897 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B BTS1Q12051 335 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B ALG7P07286 448 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B MER1P16523 270 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B RFX1P48743 811 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B FMN1Q03778 218 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B NOC4Q06512 552 aaPredicted RBP3.2□□□□□ -1.9
YLR227W-BYLR227W-B YLR049CQ12110 428 aa3.2□□□□□ -1.9
YLR227W-BYLR227W-B KAR9P32526 644 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B RPS0AP32905 252 aaKnown RBP3.19□□□□□ -1.9
YLR227W-BYLR227W-B MRPL37P36532 105 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B ASN2P49090 572 aaKnown RBP3.19□□□□□ -1.9
YLR227W-BYLR227W-B ADH6Q04894 360 aaKnown RBP3.19□□□□□ -1.9
YLR227W-BYLR227W-B NRT1Q08485 598 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B GPA2P10823 449 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B SUI2P20459 304 aaKnown RBP3.19□□□□□ -1.9
YLR227W-BYLR227W-B GSY2P27472 705 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B PRE2P30656 287 aaKnown RBP3.19□□□□□ -1.9
YLR227W-BYLR227W-B STE14P32584 239 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B AIM3P38266 947 aaKnown RBP3.19□□□□□ -1.9
YLR227W-BYLR227W-B EAF7P53911 425 aaKnown RBP3.19□□□□□ -1.9
YLR227W-BYLR227W-B NRK1P53915 240 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B SKI8Q02793 397 aaPredicted RBP3.19□□□□□ -1.9
YLR227W-BYLR227W-B SDO1Q07953 250 aaKnown RBP3.19□□□□□ -1.9
YLR227W-BYLR227W-B ECM3Q99252 613 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B CDC21P06785 304 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B RPB5P20434 215 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B ECM25P32525 599 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B ECM15P35195 104 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B SOR1P35497 357 aaKnown RBP3.19□□□□□ -1.9
YLR227W-BYLR227W-B AST2P39945 430 aaKnown RBP3.19□□□□□ -1.9
YLR227W-BYLR227W-B ECM10P39987 644 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B TWF1P53250 332 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B IDP3P53982 420 aaKnown RBP3.19□□□□□ -1.9
YLR227W-BYLR227W-B ECM11Q04110 302 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B CAC2Q04199 468 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B SOR2Q07786 357 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B FRA1Q07825 749 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B PER33Q12144 273 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B CLB6P32943 380 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B RRN3P36070 627 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B AGP2P38090 596 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B LIN1P38852 340 aaPredicted RBP3.19□□□□□ -1.9
YLR227W-BYLR227W-B HAT2P39984 401 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B YPL162CQ12042 273 aa3.19□□□□□ -1.9
YLR227W-BYLR227W-B TRP3P00937 484 aa3.18□□□□□ -1.9
YLR227W-BYLR227W-B MRP20P32387 263 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms