RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C COX4P04037 155 aa3.1□□□□□ -1.91
SMD3YLR147C CDC50P25656 391 aa3.1□□□□□ -1.91
SMD3YLR147C ALD5P40047 520 aaKnown RBP3.1□□□□□ -1.91
SMD3YLR147C RRN9P53437 365 aa3.1□□□□□ -1.91
SMD3YLR147C MRPS16Q02608 121 aa3.1□□□□□ -1.91
SMD3YLR147C PRM6Q04705 352 aa3.1□□□□□ -1.91
SMD3YLR147C IES6P32617 166 aa3.09□□□□□ -1.91
SMD3YLR147C SEO1P39709 593 aa3.09□□□□□ -1.91
SMD3YLR147C PMT5P52867 743 aa3.09□□□□□ -1.91
SMD3YLR147C RRP46P53256 223 aaPredicted RBP3.09□□□□□ -1.91
SMD3YLR147C YPR091CQ06833 770 aa3.09□□□□□ -1.91
SMD3YLR147C GPM3Q12326 303 aa3.09□□□□□ -1.91
SMD3YLR147C YBL111CQ3E7Y5 667 aa3.09□□□□□ -1.91
SMD3YLR147C OPI3P05375 206 aa3.08□□□□□ -1.92
SMD3YLR147C TOA2P32774 122 aa3.08□□□□□ -1.92
SMD3YLR147C COX13P32799 129 aa3.08□□□□□ -1.92
SMD3YLR147C LTV1P34078 463 aa3.08□□□□□ -1.92
SMD3YLR147C GPX2P38143 162 aa3.08□□□□□ -1.92
SMD3YLR147C QDR3P38227 689 aa3.08□□□□□ -1.92
SMD3YLR147C YGR018CP53211 109 aa3.08□□□□□ -1.92
SMD3YLR147C SKI8Q02793 397 aaPredicted RBP3.08□□□□□ -1.92
SMD3YLR147C PRP3Q03338 469 aaPredicted RBP3.08□□□□□ -1.92
SMD3YLR147C ECM7Q06200 448 aa3.08□□□□□ -1.92
SMD3YLR147C DCI1Q08558 271 aa3.08□□□□□ -1.92
SMD3YLR147C FCY22Q12119 530 aa3.08□□□□□ -1.92
SMD3YLR147C PSK1P31374 1356 aa3.08□□□□□ -1.92
SMD3YLR147C CCH1P50077 2039 aa3.07□□□□□ -1.92
SMD3YLR147C PRB1P09232 635 aa3.07□□□□□ -1.92
SMD3YLR147C RPL12AP0CX53 165 aaKnown RBP3.07□□□□□ -1.92
SMD3YLR147C RPL12BP0CX54 165 aa3.07□□□□□ -1.92
SMD3YLR147C NRP1P32770 719 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
SMD3YLR147C SKT5P34226 696 aa3.07□□□□□ -1.92
SMD3YLR147C MCR1P36060 302 aaKnown RBP3.07□□□□□ -1.92
SMD3YLR147C TIM17P39515 158 aa3.07□□□□□ -1.92
SMD3YLR147C YNL208WP40159 199 aaKnown RBP3.07□□□□□ -1.92
SMD3YLR147C VHS1Q03785 461 aa3.07□□□□□ -1.92
SMD3YLR147C YDL114WQ07530 308 aa3.07□□□□□ -1.92
SMD3YLR147C YOP1Q12402 180 aa3.07□□□□□ -1.92
SMD3YLR147C SMC6Q12749 1114 aa3.07□□□□□ -1.92
SMD3YLR147C ADH1P00330 348 aaKnown RBP3.06□□□□□ -1.92
SMD3YLR147C CBP6P07253 162 aaPredicted RBP3.06□□□□□ -1.92
SMD3YLR147C ZRC1P20107 442 aa3.06□□□□□ -1.92
SMD3YLR147C FUN26P31381 517 aa3.06□□□□□ -1.92
SMD3YLR147C YSC83P32792 385 aa3.06□□□□□ -1.92
SMD3YLR147C RAD5P32849 1169 aaPredicted RBP3.06□□□□□ -1.92
SMD3YLR147C ABM1P47146 123 aa3.06□□□□□ -1.92
SMD3YLR147C ROG1P53118 685 aa3.06□□□□□ -1.92
SMD3YLR147C ALF1P53904 254 aa3.06□□□□□ -1.92
SMD3YLR147C APJ1P53940 528 aa3.06□□□□□ -1.92
SMD3YLR147C RNY1Q02933 434 aaKnown RBP3.06□□□□□ -1.92
SMD3YLR147C URC2Q04411 772 aa3.06□□□□□ -1.92
SMD3YLR147C NDL1Q06568 189 aa3.06□□□□□ -1.92
SMD3YLR147C YDL199CQ12407 687 aa3.06□□□□□ -1.92
SMD3YLR147C PHO91P27514 894 aa3.05□□□□□ -1.92
SMD3YLR147C TIR2P33890 251 aa3.05□□□□□ -1.92
SMD3YLR147C GPI18P38211 433 aa3.05□□□□□ -1.92
SMD3YLR147C ATM1P40416 690 aa3.05□□□□□ -1.92
SMD3YLR147C BUD27P43573 796 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
SMD3YLR147C YPS5P53057 165 aa3.05□□□□□ -1.92
SMD3YLR147C MCT1Q12283 360 aa3.05□□□□□ -1.92
SMD3YLR147C FAB1P34756 2278 aa3.05□□□□□ -1.92
SMD3YLR147C TPK3P05986 398 aa3.04□□□□□ -1.92
SMD3YLR147C SLM5P25345 492 aaKnown RBP3.04□□□□□ -1.92
SMD3YLR147C MPE1P35728 441 aaKnown RBP3.04□□□□□ -1.92
SMD3YLR147C SRP72P38688 640 aaKnown RBP3.04□□□□□ -1.92
SMD3YLR147C PFS1P38872 237 aa3.04□□□□□ -1.92
SMD3YLR147C KEG1P43614 200 aa3.04□□□□□ -1.92
SMD3YLR147C YML6P51998 286 aa3.04□□□□□ -1.92
SMD3YLR147C MKC7P53379 596 aa3.04□□□□□ -1.92
SMD3YLR147C SPE3Q12074 293 aaKnown RBP3.04□□□□□ -1.92
SMD3YLR147C ARF1P11076 181 aaKnown RBP3.03□□□□□ -1.92
SMD3YLR147C VMA8P32610 256 aaKnown RBP3.03□□□□□ -1.92
SMD3YLR147C DOA1P36037 715 aa3.03□□□□□ -1.92
SMD3YLR147C MRPL27P36526 146 aaPredicted RBP3.03□□□□□ -1.92
SMD3YLR147C MRPS9P38120 278 aa3.03□□□□□ -1.92
SMD3YLR147C GEP4P38812 185 aa3.03□□□□□ -1.92
SMD3YLR147C PAC11P40960 533 aa3.03□□□□□ -1.92
SMD3YLR147C IGD1P43598 195 aa3.03□□□□□ -1.92
SMD3YLR147C CIK1Q01649 594 aa3.03□□□□□ -1.92
SMD3YLR147C MEH1Q02205 184 aa3.03□□□□□ -1.92
SMD3YLR147C YHC1Q05900 231 aaKnown RBP3.03□□□□□ -1.92
SMD3YLR147C ASA1Q06822 443 aa3.03□□□□□ -1.92
SMD3YLR147C NOP6Q07623 225 aaKnown RBP3.03□□□□□ -1.92
SMD3YLR147C YPQ1Q12010 308 aa3.03□□□□□ -1.92
SMD3YLR147C HTZ1Q12692 134 aaKnown RBP3.03□□□□□ -1.92
SMD3YLR147C PDE2P06776 526 aa3.02□□□□□ -1.93
SMD3YLR147C RPL1AP0CX43 217 aaKnown RBP3.02□□□□□ -1.93
SMD3YLR147C RPL1BP0CX44 217 aaKnown RBP3.02□□□□□ -1.93
SMD3YLR147C DEP1P31385 405 aa3.02□□□□□ -1.93
SMD3YLR147C SPO23P33757 523 aa3.02□□□□□ -1.93
SMD3YLR147C ECM8P38246 354 aa3.02□□□□□ -1.93
SMD3YLR147C YGL262WP53054 175 aa3.02□□□□□ -1.93
SMD3YLR147C TRM112P53738 135 aaPredicted RBP3.02□□□□□ -1.93
SMD3YLR147C RPN5Q12250 445 aaKnown RBP3.02□□□□□ -1.93
SMD3YLR147C RTT102P53330 157 aa3.01□□□□□ -1.93
SMD3YLR147C TPS1Q00764 495 aaKnown RBP3.01□□□□□ -1.93
SMD3YLR147C YDR541CQ03049 344 aa3.01□□□□□ -1.93
SMD3YLR147C GYL1Q04322 720 aa3.01□□□□□ -1.93
SMD3YLR147C FOL3Q12676 427 aaPredicted RBP3.01□□□□□ -1.93
SMD3YLR147C RNA1P11745 407 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms