RNA–Protein interactions for RNA: YLR138W

NHA1, Transcript of Na+/H+ antiporter, yeast

Gene NHA1, Length 2,958 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHA1	YLR138W	SLF1	Q12034	447 aa	Known RBP	5.68	□□□□□ -1.5
NHA1	YLR138W	ZWF1	P11412	505 aa	Known RBP	5.68	□□□□□ -1.5
NHA1	YLR138W	SNF4	P12904	322 aa		5.68	□□□□□ -1.5
NHA1	YLR138W	LDB16	P25587	256 aa		5.68	□□□□□ -1.5
NHA1	YLR138W	YIM1	P28625	365 aa		5.68	□□□□□ -1.5
NHA1	YLR138W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
NHA1	YLR138W	TDP1	P38319	544 aa		5.68	□□□□□ -1.5
NHA1	YLR138W	AZF1	P41696	914 aa		5.68	□□□□□ -1.5
NHA1	YLR138W	FAR7	P43592	221 aa		5.68	□□□□□ -1.5
NHA1	YLR138W	IBA57	P47158	497 aa		5.68	□□□□□ -1.5
NHA1	YLR138W	TWF1	P53250	332 aa		5.68	□□□□□ -1.5
NHA1	YLR138W	YMR010W	Q03687	405 aa		5.68	□□□□□ -1.5
NHA1	YLR138W	BEM2	P39960	2167 aa	Known RBP	5.68	□□□□□ -1.5
NHA1	YLR138W	DPM1	P14020	267 aa	Known RBP	5.67	□□□□□ -1.5
NHA1	YLR138W	MEF1	P25039	761 aa		5.67	□□□□□ -1.5
NHA1	YLR138W	CFD1	P40558	293 aa		5.67	□□□□□ -1.5
NHA1	YLR138W	RHO5	P53879	331 aa	Known RBP	5.67	□□□□□ -1.5
NHA1	YLR138W	YLR036C	Q07986	203 aa		5.67	□□□□□ -1.5
NHA1	YLR138W	HNT3	Q08702	217 aa		5.67	□□□□□ -1.5
NHA1	YLR138W	HIS7	P33734	552 aa	Known RBP	5.67	□□□□□ -1.5
NHA1	YLR138W	PDX3	P38075	228 aa	Known RBP	5.67	□□□□□ -1.5
NHA1	YLR138W	SOP4	P39543	234 aa	Predicted RBP	5.67	□□□□□ -1.5
NHA1	YLR138W	SIZ1	Q04195	904 aa		5.67	□□□□□ -1.5
NHA1	YLR138W	YPR174C	Q06616	221 aa	Predicted RBP	5.67	□□□□□ -1.5
NHA1	YLR138W	GRE1	Q08969	168 aa		5.67	□□□□□ -1.5
NHA1	YLR138W	SET6	Q12529	373 aa		5.67	□□□□□ -1.5
NHA1	YLR138W	HTS1	P07263	546 aa	Known RBP	5.67	□□□□□ -1.5
NHA1	YLR138W	AGP1	P25376	633 aa		5.67	□□□□□ -1.5
NHA1	YLR138W	RPL5	P26321	297 aa	Known RBP	5.67	□□□□□ -1.5
NHA1	YLR138W	VPS52	P39904	641 aa		5.67	□□□□□ -1.5
NHA1	YLR138W	MDV1	P47025	714 aa		5.67	□□□□□ -1.5
NHA1	YLR138W	MDE1	P47095	244 aa		5.67	□□□□□ -1.5
NHA1	YLR138W	DAM1	P53267	343 aa		5.67	□□□□□ -1.5
NHA1	YLR138W	GLE1	Q12315	538 aa		5.67	□□□□□ -1.5
NHA1	YLR138W	SEC62	P21825	274 aa		5.66	□□□□□ -1.5
NHA1	YLR138W	WBP1	P33767	430 aa	Known RBP	5.66	□□□□□ -1.5
NHA1	YLR138W	YBR139W	P38109	508 aa		5.66	□□□□□ -1.5
NHA1	YLR138W	ECM8	P38246	354 aa		5.66	□□□□□ -1.5
NHA1	YLR138W	GVP36	P40531	326 aa	Known RBP	5.66	□□□□□ -1.5
NHA1	YLR138W	UTP21	Q06078	939 aa	Predicted RBP	5.66	□□□□□ -1.5
NHA1	YLR138W	YOR389W	Q08912	624 aa		5.66	□□□□□ -1.5
NHA1	YLR138W	YPL278C	Q08990	100 aa		5.66	□□□□□ -1.5
NHA1	YLR138W	YPR015C	Q12531	247 aa		5.66	□□□□□ -1.5
NHA1	YLR138W	BAR1	P12630	587 aa		5.66	□□□□□ -1.5
NHA1	YLR138W	HOP1	P20050	605 aa		5.66	□□□□□ -1.5
NHA1	YLR138W	CWH43	P25618	953 aa		5.66	□□□□□ -1.5
NHA1	YLR138W	PRP19	P32523	503 aa	Known RBP	5.66	□□□□□ -1.5
NHA1	YLR138W	RPS27A	P35997	82 aa	Known RBP	5.66	□□□□□ -1.5
NHA1	YLR138W	BET3	P36149	193 aa		5.66	□□□□□ -1.5
NHA1	YLR138W	RPS27B	P38711	82 aa		5.66	□□□□□ -1.5
NHA1	YLR138W	RRP4	P38792	359 aa	Known RBP	5.66	□□□□□ -1.5
NHA1	YLR138W	ABZ2	Q03266	374 aa		5.66	□□□□□ -1.5
NHA1	YLR138W	TPP1	Q03796	238 aa		5.66	□□□□□ -1.5
NHA1	YLR138W	MCK1	P21965	375 aa	Known RBP	5.65	□□□□□ -1.5
NHA1	YLR138W	CHA1	P25379	360 aa	Known RBP	5.65	□□□□□ -1.5
NHA1	YLR138W	VPH2	P32341	215 aa		5.65	□□□□□ -1.5
NHA1	YLR138W	LHP1	P33399	275 aa	Known RBP	5.65	□□□□□ -1.5
NHA1	YLR138W	YHR097C	P38809	366 aa	Known RBP	5.65	□□□□□ -1.5
NHA1	YLR138W	MLH1	P38920	769 aa		5.65	□□□□□ -1.5
NHA1	YLR138W	NTA1	P40354	457 aa		5.65	□□□□□ -1.5
NHA1	YLR138W	TED1	P40533	473 aa		5.65	□□□□□ -1.5
NHA1	YLR138W	RPL10	P41805	221 aa	Known RBP	5.65	□□□□□ -1.5
NHA1	YLR138W	NUP57	P48837	541 aa		5.65	□□□□□ -1.5
NHA1	YLR138W	MRK1	P50873	501 aa		5.65	□□□□□ -1.5
NHA1	YLR138W	OCA1	P50946	238 aa	Predicted RBP	5.65	□□□□□ -1.5
NHA1	YLR138W	MPC1	P53157	130 aa	Known RBP	5.65	□□□□□ -1.5
NHA1	YLR138W	PUS7	Q08647	676 aa	Known RBP	5.65	□□□□□ -1.5
NHA1	YLR138W	ELP2	P42935	788 aa		5.65	□□□□□ -1.51
NHA1	YLR138W	SPT20	P50875	604 aa		5.65	□□□□□ -1.51
NHA1	YLR138W	MAL11	P53048	616 aa		5.65	□□□□□ -1.51
NHA1	YLR138W	HDA2	Q06629	674 aa		5.65	□□□□□ -1.51
NHA1	YLR138W	TPK3	P05986	398 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	PUP2	P32379	260 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	SPC34	P36131	295 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	YAR028W	P39548	234 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	AIM2	P39721	246 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	DUG1	P43616	481 aa	Known RBP	5.64	□□□□□ -1.51
NHA1	YLR138W	ASI2	P53895	289 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	PEX25	Q02969	394 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	RCF1	Q03713	159 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	PLM2	Q04383	521 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	YMR226C	Q05016	267 aa	Known RBP	5.64	□□□□□ -1.51
NHA1	YLR138W	RNH202	Q05635	350 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	YPR097W	Q06839	1073 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	DET1	Q99288	334 aa	Known RBP	5.64	□□□□□ -1.51
NHA1	YLR138W	GRR1	P24814	1151 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	VPS51	P36116	164 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	BIG1	P38813	335 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected
NHA1	YLR138W	SMK1	P41808	388 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	JHD2	P47156	728 aa	Predicted RBP	5.64	□□□□□ -1.51
NHA1	YLR138W	CSL4	P53859	292 aa	Predicted RBP	5.64	□□□□□ -1.51
NHA1	YLR138W	YLR460C	P54007	376 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	SYO1	Q07395	620 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	TRM10	Q12400	293 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	YKR073C	P36153	106 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	YBR285W	P38354	144 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	MRPS18	P42847	217 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	YGR168C	P53293	376 aa		5.64	□□□□□ -1.51
NHA1	YLR138W	NCE101	Q02820	53 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms