RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C TPS1Q00764 495 aaKnown RBP7.18□□□□□ -1.26
SNP1YIL061C YVH1Q02256 364 aaKnown RBP7.18□□□□□ -1.26
SNP1YIL061C YML096WQ04489 525 aa7.18□□□□□ -1.26
SNP1YIL061C RQC1Q05468 723 aaKnown RBP7.18□□□□□ -1.26
SNP1YIL061C BOP2Q06150 570 aa7.18□□□□□ -1.26
SNP1YIL061C YLR446WQ06204 433 aa7.18□□□□□ -1.26
SNP1YIL061C SOG2Q08817 791 aa7.18□□□□□ -1.26
SNP1YIL061C YKL033W-AQ86ZR7 236 aa7.18□□□□□ -1.26
SNP1YIL061C COX3P00420 269 aa7.17□□□□□ -1.26
SNP1YIL061C TRM1P15565 570 aaKnown RBP7.17□□□□□ -1.26
SNP1YIL061C PRP2P20095 876 aaPredicted RBP7.17□□□□□ -1.26
SNP1YIL061C VPS33P20795 691 aa7.17□□□□□ -1.26
SNP1YIL061C IDP1P21954 428 aaKnown RBP7.17□□□□□ -1.26
SNP1YIL061C NPR1P22211 790 aa7.17□□□□□ -1.26
SNP1YIL061C BUD5P25300 642 aaPredicted RBP7.17□□□□□ -1.26
SNP1YIL061C RAD51P25454 400 aa7.17□□□□□ -1.26
SNP1YIL061C ARE1P25628 610 aa7.17□□□□□ -1.26
SNP1YIL061C OAC1P32332 324 aa7.17□□□□□ -1.26
SNP1YIL061C SEC66P33754 206 aa7.17□□□□□ -1.26
SNP1YIL061C SRX1P36077 127 aa7.17□□□□□ -1.26
SNP1YIL061C OMA1P36163 345 aa7.17□□□□□ -1.26
SNP1YIL061C FMO1P38866 432 aa7.17□□□□□ -1.26
SNP1YIL061C TAT2P38967 592 aa7.17□□□□□ -1.26
SNP1YIL061C JLP2P40206 208 aa7.17□□□□□ -1.26
SNP1YIL061C LRO1P40345 661 aa7.17□□□□□ -1.26
SNP1YIL061C AIM20P40451 204 aa7.17□□□□□ -1.26
SNP1YIL061C MET28P40573 187 aa7.17□□□□□ -1.26
SNP1YIL061C CHA4P43634 648 aa7.17□□□□□ -1.26
SNP1YIL061C RPA14P50106 137 aa7.17□□□□□ -1.26
SNP1YIL061C EXG2P52911 562 aa7.17□□□□□ -1.26
SNP1YIL061C CDH1P53197 566 aa7.17□□□□□ -1.26
SNP1YIL061C FHN1P53279 174 aa7.17□□□□□ -1.26
SNP1YIL061C ATF2P53296 535 aa7.17□□□□□ -1.26
SNP1YIL061C CWC24P53769 259 aa7.17□□□□□ -1.26
SNP1YIL061C MTQ1P53944 314 aa7.17□□□□□ -1.26
SNP1YIL061C NUP49Q02199 472 aa7.17□□□□□ -1.26
SNP1YIL061C ABZ2Q03266 374 aa7.17□□□□□ -1.26
SNP1YIL061C GRX3Q03835 250 aa7.17□□□□□ -1.26
SNP1YIL061C RSM24Q03976 319 aa7.17□□□□□ -1.26
SNP1YIL061C MRX10Q05648 414 aa7.17□□□□□ -1.26
SNP1YIL061C MDM36Q06820 579 aa7.17□□□□□ -1.26
SNP1YIL061C RBD2Q12270 262 aa7.17□□□□□ -1.26
SNP1YIL061C GLO4Q12320 285 aa7.17□□□□□ -1.26
SNP1YIL061C SKS1Q12505 502 aa7.17□□□□□ -1.26
SNP1YIL061C YOL163WP0CF20 169 aa7.16□□□□□ -1.26
SNP1YIL061C THR1P17423 357 aaKnown RBP7.16□□□□□ -1.26
SNP1YIL061C MDH1P17505 334 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
SNP1YIL061C RPB5P20434 215 aa7.16□□□□□ -1.26
SNP1YIL061C RNQ1P25367 405 aa7.16□□□□□ -1.26
SNP1YIL061C MGR1P25573 417 aa7.16□□□□□ -1.26
SNP1YIL061C HIR2P32480 875 aa7.16□□□□□ -1.26
SNP1YIL061C CDC13P32797 924 aaKnown RBP7.16□□□□□ -1.26
SNP1YIL061C TEF4P36008 412 aaKnown RBP7.16□□□□□ -1.26
SNP1YIL061C DHR2P36009 735 aaPredicted RBP7.16□□□□□ -1.26
SNP1YIL061C SEA4P38164 1038 aa7.16□□□□□ -1.26
SNP1YIL061C PEX18P38855 283 aa7.16□□□□□ -1.26
SNP1YIL061C LYS1P38998 373 aaRIP-Chip data7.16□□□□□ -1.26 RIP-Chip
SNP1YIL061C TED1P40533 473 aa7.16□□□□□ -1.26
SNP1YIL061C SSY5P47002 699 aa7.16□□□□□ -1.26
SNP1YIL061C JHD2P47156 728 aaPredicted RBP7.16□□□□□ -1.26
SNP1YIL061C HXT16P47185 567 aa7.16□□□□□ -1.26
SNP1YIL061C NUP57P48837 541 aa7.16□□□□□ -1.26
SNP1YIL061C MPC1P53157 130 aaKnown RBP7.16□□□□□ -1.26
SNP1YIL061C RBG2P53295 368 aaKnown RBP7.16□□□□□ -1.26
SNP1YIL061C SWS2P53937 143 aa7.16□□□□□ -1.26
SNP1YIL061C MAP1Q01662 387 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
SNP1YIL061C YPL191CQ08930 360 aa7.16□□□□□ -1.26
SNP1YIL061C MMT2Q08970 484 aa7.16□□□□□ -1.26
SNP1YIL061C MED2Q12124 431 aa7.16□□□□□ -1.26
SNP1YIL061C RPN13O13563 156 aa7.15□□□□□ -1.26
SNP1YIL061C CBS1P14066 229 aa7.15□□□□□ -1.26
SNP1YIL061C RED1P14291 827 aa7.15□□□□□ -1.26
SNP1YIL061C GIT1P25346 518 aa7.15□□□□□ -1.26
SNP1YIL061C RIB7P33312 244 aa7.15□□□□□ -1.26
SNP1YIL061C SKN1P33336 771 aa7.15□□□□□ -1.26
SNP1YIL061C EDS1P38073 919 aa7.15□□□□□ -1.26
SNP1YIL061C SRO77P38163 1010 aa7.15□□□□□ -1.26
SNP1YIL061C SBE22P38814 852 aa7.15□□□□□ -1.26
SNP1YIL061C CEM1P39525 442 aa7.15□□□□□ -1.26
SNP1YIL061C ELO1P39540 310 aa7.15□□□□□ -1.26
SNP1YIL061C RPL10P41805 221 aaKnown RBP7.15□□□□□ -1.26
SNP1YIL061C YJL055WP47044 245 aa7.15□□□□□ -1.26
SNP1YIL061C FAA4P47912 694 aaKnown RBP7.15□□□□□ -1.26
SNP1YIL061C MNN10P50108 393 aaKnown RBP7.15□□□□□ -1.26
SNP1YIL061C EGD1Q02642 157 aaKnown RBP7.15□□□□□ -1.26
SNP1YIL061C YDR444WQ04093 687 aa7.15□□□□□ -1.26
SNP1YIL061C MGR3Q04472 501 aa7.15□□□□□ -1.26
SNP1YIL061C YFT2Q06676 274 aa7.15□□□□□ -1.26
SNP1YIL061C VPS36Q06696 566 aa7.15□□□□□ -1.26
SNP1YIL061C NGL1Q08213 363 aaKnown RBP7.15□□□□□ -1.26
SNP1YIL061C IRC13Q08630 104 aa7.15□□□□□ -1.26
SNP1YIL061C RCN2Q12044 265 aa7.15□□□□□ -1.26
SNP1YIL061C DCP1Q12517 231 aaPredicted RBP7.15□□□□□ -1.26
SNP1YIL061C LAG2Q92325 660 aa7.15□□□□□ -1.26
SNP1YIL061C BEM2P39960 2167 aaKnown RBP7.15□□□□□ -1.27
SNP1YIL061C NFT1P0CE68 1218 aa7.14□□□□□ -1.27
SNP1YIL061C TEC1P18412 486 aa7.14□□□□□ -1.27
SNP1YIL061C PTP1P25044 335 aa7.14□□□□□ -1.27
SNP1YIL061C TAH1P25638 111 aaPredicted RBP7.14□□□□□ -1.27
SNP1YIL061C PRO1P32264 428 aa7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms