RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W YDR286CQ05530 114 aa2.33□□□□□ -2.04
SSF1YHR066W UAF30Q08747 228 aa2.33□□□□□ -2.04
SSF1YHR066W PLP2Q12017 286 aa2.33□□□□□ -2.04
SSF1YHR066W ISA2Q12425 185 aa2.33□□□□□ -2.04
SSF1YHR066W IZH2Q12442 317 aa2.33□□□□□ -2.04
SSF1YHR066W EXG1P23776 448 aaKnown RBP2.32□□□□□ -2.04
SSF1YHR066W NUP2P32499 720 aa2.32□□□□□ -2.04
SSF1YHR066W CYS4P32582 507 aaKnown RBP2.32□□□□□ -2.04
SSF1YHR066W PRS1P32895 427 aaKnown RBP2.32□□□□□ -2.04
SSF1YHR066W RXT2P38255 430 aa2.32□□□□□ -2.04
SSF1YHR066W SLX1P38324 304 aa2.32□□□□□ -2.04
SSF1YHR066W STN1P38960 494 aa2.32□□□□□ -2.04
SSF1YHR066W PES4P39684 611 aa2.32□□□□□ -2.04
SSF1YHR066W UTP18P40362 594 aaPredicted RBP2.32□□□□□ -2.04
SSF1YHR066W YIL029CP40538 142 aa2.32□□□□□ -2.04
SSF1YHR066W MRM2P53123 320 aa2.32□□□□□ -2.04
SSF1YHR066W MTQ1P53944 314 aa2.32□□□□□ -2.04
SSF1YHR066W VPS9P54787 451 aa2.32□□□□□ -2.04
SSF1YHR066W HAL1Q01766 294 aa2.32□□□□□ -2.04
SSF1YHR066W MMT1Q03218 510 aa2.32□□□□□ -2.04
SSF1YHR066W YLR456WQ06199 204 aa2.32□□□□□ -2.04
SSF1YHR066W MDM36Q06820 579 aa2.32□□□□□ -2.04
SSF1YHR066W CUE5Q08412 411 aaKnown RBP2.32□□□□□ -2.04
SSF1YHR066W PGC1Q08959 321 aa2.32□□□□□ -2.04
SSF1YHR066W TY1B-JR2P47100 1755 aaKnown RBP2.32□□□□□ -2.04
SSF1YHR066W TY1B-ER2Q03619 1755 aa2.32□□□□□ -2.04
SSF1YHR066W TY1B-MR1Q04214 1755 aa2.32□□□□□ -2.04
SSF1YHR066W TY1B-MR2Q04670 1755 aaKnown RBP2.32□□□□□ -2.04
SSF1YHR066W TY1B-LR1Q12088 1755 aaKnown RBP2.32□□□□□ -2.04
SSF1YHR066W TY1B-NL1Q12112 1755 aa2.32□□□□□ -2.04
SSF1YHR066W TY1B-GR1Q12141 1755 aa2.32□□□□□ -2.04
SSF1YHR066W TY1B-BLQ12490 1755 aa2.32□□□□□ -2.04
SSF1YHR066W NAM2P11325 894 aa2.31□□□□□ -2.04
SSF1YHR066W CAP2P13517 287 aa2.31□□□□□ -2.04
SSF1YHR066W MDH1P17505 334 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SSF1YHR066W MNE1P24720 663 aa2.31□□□□□ -2.04
SSF1YHR066W MDL1P33310 695 aa2.31□□□□□ -2.04
SSF1YHR066W COX14P39103 70 aa2.31□□□□□ -2.04
SSF1YHR066W MIG3P39943 394 aa2.31□□□□□ -2.04
SSF1YHR066W TOS3P43637 560 aa2.31□□□□□ -2.04
SSF1YHR066W ATP22P50273 684 aaPredicted RBP2.31□□□□□ -2.04
SSF1YHR066W YGR111WP53265 400 aa2.31□□□□□ -2.04
SSF1YHR066W CIK1Q01649 594 aa2.31□□□□□ -2.04
SSF1YHR066W AEP3Q12089 606 aa2.31□□□□□ -2.04
SSF1YHR066W NCA2Q12374 616 aa2.31□□□□□ -2.04
SSF1YHR066W CHD1P32657 1468 aa2.31□□□□□ -2.04
SSF1YHR066W SKI3P17883 1432 aaKnown RBP2.31□□□□□ -2.04
SSF1YHR066W DRS2P39524 1355 aa2.3□□□□□ -2.04
SSF1YHR066W RPO21P04050 1733 aaKnown RBP2.3□□□□□ -2.04
SSF1YHR066W SPO14P36126 1683 aa2.3□□□□□ -2.04
SSF1YHR066W UFD4P33202 1483 aa2.3□□□□□ -2.04
SSF1YHR066W MSI1P13712 422 aa2.3□□□□□ -2.04
SSF1YHR066W RIM1P32445 135 aaKnown RBP2.3□□□□□ -2.04
SSF1YHR066W DPH5P32469 300 aaPredicted RBP2.3□□□□□ -2.04
SSF1YHR066W ATP3P38077 311 aaKnown RBP2.3□□□□□ -2.04
SSF1YHR066W YHK8P38776 514 aa2.3□□□□□ -2.04
SSF1YHR066W GPI16P38875 610 aa2.3□□□□□ -2.04
SSF1YHR066W FAD1P38913 306 aa2.3□□□□□ -2.04
SSF1YHR066W YER079WP40052 210 aaKnown RBP2.3□□□□□ -2.04
SSF1YHR066W ADA2Q02336 434 aa2.3□□□□□ -2.04
SSF1YHR066W YDR341CQ05506 607 aaKnown RBP2.3□□□□□ -2.04
SSF1YHR066W RIF2Q06208 395 aa2.3□□□□□ -2.04
SSF1YHR066W YGK3Q12222 375 aaPredicted RBP2.3□□□□□ -2.04
SSF1YHR066W PAR32Q12515 295 aaKnown RBP2.3□□□□□ -2.04
SSF1YHR066W USO1P25386 1790 aa2.3□□□□□ -2.04
SSF1YHR066W PAN1P32521 1480 aa2.29□□□□□ -2.04
SSF1YHR066W DST1P07273 309 aa2.29□□□□□ -2.04
SSF1YHR066W HSP26P15992 214 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SSF1YHR066W ALG1P16661 449 aa2.29□□□□□ -2.04
SSF1YHR066W RRP7P25368 297 aaPredicted RBP2.29□□□□□ -2.04
SSF1YHR066W PUP2P32379 260 aa2.29□□□□□ -2.04
SSF1YHR066W SKN1P33336 771 aa2.29□□□□□ -2.04
SSF1YHR066W OLA1P38219 394 aaKnown RBP2.29□□□□□ -2.04
SSF1YHR066W GDI1P39958 451 aaKnown RBP2.29□□□□□ -2.04
SSF1YHR066W SEC28P40509 296 aaKnown RBP2.29□□□□□ -2.04
SSF1YHR066W LCB2P40970 561 aa2.29□□□□□ -2.04
SSF1YHR066W LCB3P47013 409 aa2.29□□□□□ -2.04
SSF1YHR066W MPP10P47083 593 aaKnown RBP2.29□□□□□ -2.04
SSF1YHR066W TOS2P50078 622 aa2.29□□□□□ -2.04
SSF1YHR066W BNS1P50084 137 aa2.29□□□□□ -2.04
SSF1YHR066W TDA1Q03533 586 aa2.29□□□□□ -2.04
SSF1YHR066W NDE2Q07500 545 aa2.29□□□□□ -2.04
SSF1YHR066W SMF3Q12078 473 aaPredicted RBP2.29□□□□□ -2.04
SSF1YHR066W RUP1Q12242 671 aa2.29□□□□□ -2.04
SSF1YHR066W GPM3Q12326 303 aa2.29□□□□□ -2.04
SSF1YHR066W JID1Q12350 301 aa2.29□□□□□ -2.04
SSF1YHR066W YPK9Q12697 1472 aa2.28□□□□□ -2.04
SSF1YHR066W SSC1P0CS90 654 aaKnown RBP2.28□□□□□ -2.04
SSF1YHR066W RPB5P20434 215 aa2.28□□□□□ -2.04
SSF1YHR066W HSP104P31539 908 aaKnown RBP2.28□□□□□ -2.04
SSF1YHR066W RTC2P38279 296 aa2.28□□□□□ -2.04
SSF1YHR066W INM1P38710 295 aa2.28□□□□□ -2.04
SSF1YHR066W BAT1P38891 393 aaKnown RBP2.28□□□□□ -2.04
SSF1YHR066W PTI1P39927 425 aaPredicted RBP2.28□□□□□ -2.04
SSF1YHR066W EGT2P42835 1041 aa2.28□□□□□ -2.04
SSF1YHR066W BUD27P43573 796 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
SSF1YHR066W BIR1P47134 954 aa2.28□□□□□ -2.04
SSF1YHR066W GPI8P49018 411 aa2.28□□□□□ -2.04
SSF1YHR066W MST27P53176 234 aa2.28□□□□□ -2.04
SSF1YHR066W RTN1Q04947 295 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms