RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W GLE1Q12315 538 aa10.57□□□□□ -0.72
SNF6YHL025W THR1P17423 357 aaKnown RBP10.56□□□□□ -0.72
SNF6YHL025W AAC3P18238 307 aa10.56□□□□□ -0.72
SNF6YHL025W PET9P18239 318 aaKnown RBP10.56□□□□□ -0.72
SNF6YHL025W IDH1P28834 360 aaKnown RBP RIP-Chip data10.56□□□□□ -0.72not detected
SNF6YHL025W GSH1P32477 678 aa10.56□□□□□ -0.72
SNF6YHL025W RPN2P32565 945 aaKnown RBP10.56□□□□□ -0.72
SNF6YHL025W TAF14P35189 244 aa10.56□□□□□ -0.72
SNF6YHL025W TRR2P38816 342 aa10.56□□□□□ -0.72
SNF6YHL025W COG3P40094 801 aa10.56□□□□□ -0.72
SNF6YHL025W YIL086CP40503 102 aa10.56□□□□□ -0.72
SNF6YHL025W MET28P40573 187 aa10.56□□□□□ -0.72
SNF6YHL025W BIT61P47041 543 aa10.56□□□□□ -0.72
SNF6YHL025W COG5P53951 403 aa10.56□□□□□ -0.72
SNF6YHL025W TMA20P89886 181 aaPredicted RBP10.56□□□□□ -0.72
SNF6YHL025W YPL066WQ12194 479 aa10.56□□□□□ -0.72
SNF6YHL025W YDR061WQ12298 539 aa10.56□□□□□ -0.72
SNF6YHL025W MHF1Q3E835 90 aa10.56□□□□□ -0.72
SNF6YHL025W CBS1P14066 229 aa10.55□□□□□ -0.72
SNF6YHL025W RRP7P25368 297 aaPredicted RBP10.55□□□□□ -0.72
SNF6YHL025W RHB1P25378 209 aa10.55□□□□□ -0.72
SNF6YHL025W AUR1P36107 401 aaPredicted RBP10.55□□□□□ -0.72
SNF6YHL025W GIP2P40036 548 aa10.55□□□□□ -0.72
SNF6YHL025W ALK1P43633 760 aaKnown RBP10.55□□□□□ -0.72
SNF6YHL025W ROM1P53046 1155 aa10.55□□□□□ -0.72
SNF6YHL025W YPR091CQ06833 770 aa10.55□□□□□ -0.72
SNF6YHL025W YLR126CQ12288 251 aa10.55□□□□□ -0.72
SNF6YHL025W TPK3P05986 398 aa10.54□□□□□ -0.72
SNF6YHL025W RIP1P08067 215 aa10.54□□□□□ -0.72
SNF6YHL025W STE4P18851 423 aa10.54□□□□□ -0.72
SNF6YHL025W YCR006CP25350 157 aa10.54□□□□□ -0.72
SNF6YHL025W PRE6P40303 254 aaKnown RBP10.54□□□□□ -0.72
SNF6YHL025W MSS2P40990 351 aa10.54□□□□□ -0.72
SNF6YHL025W RNH70P53331 553 aa10.54□□□□□ -0.72
SNF6YHL025W MTQ1P53944 314 aa10.54□□□□□ -0.72
SNF6YHL025W YPR172WQ06608 200 aa10.54□□□□□ -0.72
SNF6YHL025W NFI1Q12216 726 aa10.54□□□□□ -0.72
SNF6YHL025W APN1P22936 367 aa10.53□□□□□ -0.72
SNF6YHL025W ASF2P32448 525 aaPredicted RBP10.53□□□□□ -0.72
SNF6YHL025W PRP21P32524 280 aaPredicted RBP10.53□□□□□ -0.72
SNF6YHL025W PTR2P32901 601 aa10.53□□□□□ -0.72
SNF6YHL025W YOR062CP36025 268 aa10.53□□□□□ -0.72
SNF6YHL025W EGD2P38879 174 aaKnown RBP10.53□□□□□ -0.72
SNF6YHL025W YGR168CP53293 376 aa10.53□□□□□ -0.72
SNF6YHL025W TPS1Q00764 495 aaKnown RBP10.53□□□□□ -0.72
SNF6YHL025W SMA2Q04658 369 aa10.53□□□□□ -0.72
SNF6YHL025W NAT4Q04751 285 aa10.53□□□□□ -0.72
SNF6YHL025W RNH202Q05635 350 aa10.53□□□□□ -0.72
SNF6YHL025W CNA1P23287 553 aa10.52□□□□□ -0.73
SNF6YHL025W RPS27AP35997 82 aaKnown RBP10.52□□□□□ -0.73
SNF6YHL025W VPS51P36116 164 aa10.52□□□□□ -0.73
SNF6YHL025W RPS27BP38711 82 aa10.52□□□□□ -0.73
SNF6YHL025W GOS1P38736 223 aa10.52□□□□□ -0.73
SNF6YHL025W FMP52P40008 231 aa10.52□□□□□ -0.73
SNF6YHL025W NUP57P48837 541 aa10.52□□□□□ -0.73
SNF6YHL025W MON1P53129 644 aa10.52□□□□□ -0.73
SNF6YHL025W RSN1Q03516 953 aa10.52□□□□□ -0.73
SNF6YHL025W SMP3Q04174 516 aa10.52□□□□□ -0.73
SNF6YHL025W YOL036WQ08206 761 aa10.52□□□□□ -0.73
SNF6YHL025W YPL119C-AQ3E751 87 aa10.52□□□□□ -0.73
SNF6YHL025W DAL82P21705 255 aa10.51□□□□□ -0.73
SNF6YHL025W MXR2P25566 168 aa10.51□□□□□ -0.73
SNF6YHL025W KAP122P32767 1081 aa10.51□□□□□ -0.73
SNF6YHL025W BET3P36149 193 aa10.51□□□□□ -0.73
SNF6YHL025W AHP1P38013 176 aaKnown RBP10.51□□□□□ -0.73
SNF6YHL025W YBR138CP38277 524 aa10.51□□□□□ -0.73
SNF6YHL025W YLF2P38746 405 aa10.51□□□□□ -0.73
SNF6YHL025W SSZ1P38788 538 aaKnown RBP10.51□□□□□ -0.73
SNF6YHL025W TRM9P49957 279 aa10.51□□□□□ -0.73
SNF6YHL025W SLD3P53135 668 aa10.51□□□□□ -0.73
SNF6YHL025W MPC1P53157 130 aaKnown RBP10.51□□□□□ -0.73
SNF6YHL025W TLG1Q03322 224 aa10.51□□□□□ -0.73
SNF6YHL025W YOR365CQ08844 703 aa10.51□□□□□ -0.73
SNF6YHL025W RPS21BQ3E754 87 aaKnown RBP10.51□□□□□ -0.73
SNF6YHL025W PRP8P33334 2413 aaKnown RBP10.5□□□□□ -0.73
SNF6YHL025W MOD5P07884 428 aa10.5□□□□□ -0.73
SNF6YHL025W YOL163WP0CF20 169 aa10.5□□□□□ -0.73
SNF6YHL025W TAL1P15019 335 aaKnown RBP10.5□□□□□ -0.73
SNF6YHL025W MCK1P21965 375 aaKnown RBP10.5□□□□□ -0.73
SNF6YHL025W FES1P38260 290 aa10.5□□□□□ -0.73
SNF6YHL025W ISC1P40015 477 aaKnown RBP10.5□□□□□ -0.73
SNF6YHL025W YIL152WP40455 235 aa10.5□□□□□ -0.73
SNF6YHL025W IMD4P50094 524 aaKnown RBP10.5□□□□□ -0.73
SNF6YHL025W YGR266WP53326 701 aa10.5□□□□□ -0.73
SNF6YHL025W SNP1Q00916 300 aaPredicted RBP10.5□□□□□ -0.73
SNF6YHL025W VPS36Q06696 566 aa10.5□□□□□ -0.73
SNF6YHL025W MED11Q99278 115 aa10.5□□□□□ -0.73
SNF6YHL025W URE2P23202 354 aaKnown RBP10.49□□□□□ -0.73
SNF6YHL025W TAT2P38967 592 aa10.49□□□□□ -0.73
SNF6YHL025W SOP4P39543 234 aaPredicted RBP10.49□□□□□ -0.73
SNF6YHL025W ICE2P40499 491 aa10.49□□□□□ -0.73
SNF6YHL025W SNF12P53628 566 aa10.49□□□□□ -0.73
SNF6YHL025W YSA1Q01976 231 aa10.49□□□□□ -0.73
SNF6YHL025W CTL1Q03220 320 aaKnown RBP10.49□□□□□ -0.73
SNF6YHL025W YPR174CQ06616 221 aaPredicted RBP10.49□□□□□ -0.73
SNF6YHL025W YOR214CQ12282 236 aa10.49□□□□□ -0.73
SNF6YHL025W SIR3P06701 978 aa10.48□□□□□ -0.73
SNF6YHL025W RPC40P07703 335 aaKnown RBP10.48□□□□□ -0.73
SNF6YHL025W TFS1P14306 219 aa10.48□□□□□ -0.73
SNF6YHL025W YCK1P23291 538 aa10.48□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms