RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C BNA3P47039 444 aaKnown RBP12.12□□□□□ -0.47
SHU1YHL006C DIA3P52290 468 aa12.12□□□□□ -0.47
SHU1YHL006C CUZ1P53899 274 aa12.12□□□□□ -0.47
SHU1YHL006C SUB1P54000 292 aaKnown RBP12.12□□□□□ -0.47
SHU1YHL006C RAD30Q04049 632 aa12.12□□□□□ -0.47
SHU1YHL006C NAT4Q04751 285 aa12.12□□□□□ -0.47
SHU1YHL006C DCR2Q05924 578 aa12.12□□□□□ -0.47
SHU1YHL006C FLP1P03870 423 aa12.11□□□□□ -0.47
SHU1YHL006C ADE5,7P07244 802 aaKnown RBP12.11□□□□□ -0.47
SHU1YHL006C TOP3P13099 656 aa12.11□□□□□ -0.47
SHU1YHL006C PBN1P25580 416 aa12.11□□□□□ -0.47
SHU1YHL006C CWH43P25618 953 aa12.11□□□□□ -0.47
SHU1YHL006C LHP1P33399 275 aaKnown RBP12.11□□□□□ -0.47
SHU1YHL006C TSC10P38342 320 aa12.11□□□□□ -0.47
SHU1YHL006C YIL169CP40442 995 aa12.11□□□□□ -0.47
SHU1YHL006C KEL2P50090 882 aa12.11□□□□□ -0.47
SHU1YHL006C USE1P53146 245 aa12.11□□□□□ -0.47
SHU1YHL006C YML119WQ03208 357 aa12.11□□□□□ -0.47
SHU1YHL006C RAD33Q04231 177 aa12.11□□□□□ -0.47
SHU1YHL006C PLM2Q04383 521 aa12.11□□□□□ -0.47
SHU1YHL006C RRG7Q08774 242 aaPredicted RBP12.11□□□□□ -0.47
SHU1YHL006C YPR202WQ08993 238 aa12.11□□□□□ -0.47
SHU1YHL006C NSL1Q12143 216 aa12.11□□□□□ -0.47
SHU1YHL006C RPS21BQ3E754 87 aaKnown RBP12.11□□□□□ -0.47
SHU1YHL006C PUT2P07275 575 aa12.1□□□□□ -0.47
SHU1YHL006C YFR010W-AP0C5N0 62 aa12.1□□□□□ -0.47
SHU1YHL006C MER1P16523 270 aa12.1□□□□□ -0.47
SHU1YHL006C CUE2P36075 443 aaKnown RBP12.1□□□□□ -0.47
SHU1YHL006C DCI1Q08558 271 aa12.1□□□□□ -0.47
SHU1YHL006C DMC1P25453 334 aa12.09□□□□□ -0.47
SHU1YHL006C ATS1P31386 333 aa12.09□□□□□ -0.47
SHU1YHL006C TOD6P34219 525 aa12.09□□□□□ -0.47
SHU1YHL006C TPO5P36029 618 aa12.09□□□□□ -0.47
SHU1YHL006C MNN9P39107 395 aaKnown RBP12.09□□□□□ -0.47
SHU1YHL006C ERB1Q04660 807 aaKnown RBP12.09□□□□□ -0.47
SHU1YHL006C DYN3Q04949 312 aa12.09□□□□□ -0.47
SHU1YHL006C MTR10Q99189 972 aa12.09□□□□□ -0.47
SHU1YHL006C THR1P17423 357 aaKnown RBP12.08□□□□□ -0.48
SHU1YHL006C CSM1P25651 190 aa12.08□□□□□ -0.48
SHU1YHL006C ERG9P29704 444 aa12.08□□□□□ -0.48
SHU1YHL006C DGR2P32330 852 aa12.08□□□□□ -0.48
SHU1YHL006C KRE6P32486 720 aa12.08□□□□□ -0.48
SHU1YHL006C TOA1P32773 286 aa12.08□□□□□ -0.48
SHU1YHL006C HEK2P38199 381 aaKnown RBP RIP-Chip data12.08□□□□□ -0.48 RIP-Chip
SHU1YHL006C IAH1P41734 238 aa12.08□□□□□ -0.48
SHU1YHL006C SMK1P41808 388 aa12.08□□□□□ -0.48
SHU1YHL006C COG2P53271 262 aa12.08□□□□□ -0.48
SHU1YHL006C HSP31Q04432 237 aa12.08□□□□□ -0.48
SHU1YHL006C COX17Q12287 69 aa12.08□□□□□ -0.48
SHU1YHL006C HTA1P04911 132 aaKnown RBP12.07□□□□□ -0.48
SHU1YHL006C KSS1P14681 368 aa12.07□□□□□ -0.48
SHU1YHL006C CLB3P24870 427 aa12.07□□□□□ -0.48
SHU1YHL006C PTC6P25646 442 aa12.07□□□□□ -0.48
SHU1YHL006C YPT7P32939 208 aa12.07□□□□□ -0.48
SHU1YHL006C ZTA1P38230 334 aaKnown RBP12.07□□□□□ -0.48
SHU1YHL006C MTW1P39731 289 aa12.07□□□□□ -0.48
SHU1YHL006C YNL208WP40159 199 aaKnown RBP12.07□□□□□ -0.48
SHU1YHL006C ARR1Q06596 294 aa12.07□□□□□ -0.48
SHU1YHL006C Q0144Q9ZZW2 109 aa12.07□□□□□ -0.48
SHU1YHL006C THP2O13539 261 aaKnown RBP12.06□□□□□ -0.48
SHU1YHL006C EXO84P38261 753 aa12.06□□□□□ -0.48
SHU1YHL006C NSG1P38837 291 aa12.06□□□□□ -0.48
SHU1YHL006C FAD1P38913 306 aa12.06□□□□□ -0.48
SHU1YHL006C MRX1P40050 688 aa12.06□□□□□ -0.48
SHU1YHL006C CTL1Q03220 320 aaKnown RBP12.06□□□□□ -0.48
SHU1YHL006C GAS2Q06135 555 aa12.06□□□□□ -0.48
SHU1YHL006C RDR1Q08904 546 aa12.06□□□□□ -0.48
SHU1YHL006C FMP40Q08968 688 aaPredicted RBP12.06□□□□□ -0.48
SHU1YHL006C FLO9P39712 1322 aa12.06□□□□□ -0.48
SHU1YHL006C YAP1P19880 650 aaKnown RBP12.05□□□□□ -0.48
SHU1YHL006C RPS1BP23248 255 aaKnown RBP12.05□□□□□ -0.48
SHU1YHL006C YIM1P28625 365 aa12.05□□□□□ -0.48
SHU1YHL006C ARF3P40994 183 aaRIP-Chip data12.05□□□□□ -0.48not detected
SHU1YHL006C DCP2P53550 970 aaKnown RBP12.05□□□□□ -0.48
SHU1YHL006C YKU80Q04437 629 aa12.05□□□□□ -0.48
SHU1YHL006C MFG1Q07684 458 aa12.05□□□□□ -0.48
SHU1YHL006C YHR214C-DP0CX93 97 aa12.04□□□□□ -0.48
SHU1YHL006C RAD51P25454 400 aa12.04□□□□□ -0.48
SHU1YHL006C ATG15P25641 520 aa12.04□□□□□ -0.48
SHU1YHL006C TEF4P36008 412 aaKnown RBP12.04□□□□□ -0.48
SHU1YHL006C YFR054CP43622 192 aa12.04□□□□□ -0.48
SHU1YHL006C MNN5P46982 586 aa12.04□□□□□ -0.48
SHU1YHL006C LSG1P53145 640 aaKnown RBP12.04□□□□□ -0.48
SHU1YHL006C DBP6P53734 629 aaKnown RBP12.04□□□□□ -0.48
SHU1YHL006C YDR541CQ03049 344 aa12.04□□□□□ -0.48
SHU1YHL006C NPC2Q12408 173 aa12.04□□□□□ -0.48
SHU1YHL006C RPP1BP10622 106 aaKnown RBP12.03□□□□□ -0.48
SHU1YHL006C CTA1P15202 515 aa12.03□□□□□ -0.48
SHU1YHL006C PRP4P20053 465 aaKnown RBP12.03□□□□□ -0.48
SHU1YHL006C SAN1P22470 610 aa12.03□□□□□ -0.48
SHU1YHL006C CDC39P25655 2108 aaKnown RBP12.03□□□□□ -0.48
SHU1YHL006C APD1P38281 316 aa12.03□□□□□ -0.48
SHU1YHL006C ECM34P38728 170 aa12.03□□□□□ -0.48
SHU1YHL006C TRM5P38793 499 aa12.03□□□□□ -0.48
SHU1YHL006C LEM3P42838 414 aa12.03□□□□□ -0.48
SHU1YHL006C PRY1P47032 299 aa12.03□□□□□ -0.48
SHU1YHL006C MTQ1P53944 314 aa12.03□□□□□ -0.48
SHU1YHL006C GGA1Q06336 557 aa12.03□□□□□ -0.48
SHU1YHL006C MF(ALPHA)1P01149 165 aa12.02□□□□□ -0.49
SHU1YHL006C YCK1P23291 538 aa12.02□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms