RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFK1	YGR240C	RPL4B	P49626	362 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	SBH2	P52871	88 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	LRS4	Q04087	347 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	MCM21	Q06675	368 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	WHI4	Q07655	649 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	PAA1	Q12447	191 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	WIP1	Q2V2P8	89 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	HTB1	P02293	131 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	HTB2	P02294	131 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	TUB1	P09733	447 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	VMA16	P23968	213 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	YBL010C	P32788	280 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	WBP1	P33767	430 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	TAF14	P35189	244 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	ZTA1	P38230	334 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	MIC12	P38341	106 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	YAT2	P40017	923 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	SDP1	P40479	209 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	CWC23	P52868	283 aa	Predicted RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	TNA1	P53322	534 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	STD1	Q02794	444 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	EKI1	Q03764	534 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	CRR1	Q05790	422 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	PER33	Q12144	273 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	PKH2	Q12236	1081 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	YOR012W	Q12351	137 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	URA3	P03962	267 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	VPS33	P20795	691 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	RAD57	P25301	460 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	YPS1	P32329	569 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	FRE1	P32791	686 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	BIG1	P38813	335 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	CCT4	P39078	528 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	MAF1	P41910	395 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	YGR201C	P42936	225 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	ZAP1	P47043	880 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	YJR054W	P47114	497 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	CTR1	P49573	406 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	YNL035C	P53962	389 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	SPP2	Q02521	185 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	YPL080C	Q02826	108 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	FIN1	Q03898	291 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	HED1	Q03937	162 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	CSM3	Q04659	317 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	PUS5	Q06244	254 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	SUE1	Q06524	206 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	FRE3	Q08905	711 aa		4.2	□□□□□ -1.74
PFK1	YGR240C	ERG27	Q12452	347 aa	Known RBP	4.2	□□□□□ -1.74
PFK1	YGR240C	PDE2	P06776	526 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	SPT3	P06844	337 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	ATP1	P07251	545 aa	Known RBP	4.19	□□□□□ -1.74
PFK1	YGR240C	RPL11A	P0C0W9	174 aa	Known RBP	4.19	□□□□□ -1.74
PFK1	YGR240C	URA4	P20051	364 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
PFK1	YGR240C	CDC13	P32797	924 aa	Known RBP	4.19	□□□□□ -1.74
PFK1	YGR240C	COS9	P36034	407 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	PTC4	P38089	393 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	DER1	P38307	211 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	TSL1	P38427	1098 aa	Known RBP	4.19	□□□□□ -1.74
PFK1	YGR240C	SBE22	P38814	852 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	YIL165C	P40446	119 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	BAP3	P41815	604 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	RPC11	Q04307	110 aa	Predicted RBP	4.19	□□□□□ -1.74
PFK1	YGR240C	WTM2	Q12206	467 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	HTZ1	Q12692	134 aa	Known RBP	4.19	□□□□□ -1.74
PFK1	YGR240C	RPL11B	Q3E757	174 aa	Predicted RBP	4.19	□□□□□ -1.74
PFK1	YGR240C	YCL001W-B	Q96VH2	84 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	YLR149C	Q99296	730 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	DST1	P07273	309 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	SEC14	P24280	304 aa	Known RBP	4.19	□□□□□ -1.74
PFK1	YGR240C	RAD5	P32849	1169 aa	Predicted RBP	4.19	□□□□□ -1.74
PFK1	YGR240C	PRS4	P38063	326 aa	Predicted RBP	4.19	□□□□□ -1.74
PFK1	YGR240C	UBA4	P38820	440 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	GIP2	P40036	548 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	TDA10	P42938	290 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	YGL235W	P53071	178 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	RUB1	Q03919	77 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	ADY4	Q05955	493 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	MRPL35	Q06678	367 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	YPR091C	Q06833	770 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	SHS1	Q07657	551 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	TMS1	Q12116	473 aa		4.19	□□□□□ -1.74
PFK1	YGR240C	TRP4	P07285	380 aa	Predicted RBP	4.18	□□□□□ -1.74
PFK1	YGR240C	PET122	P10355	254 aa		4.18	□□□□□ -1.74
PFK1	YGR240C	ERG9	P29704	444 aa		4.18	□□□□□ -1.74
PFK1	YGR240C	UPS2	P35200	230 aa		4.18	□□□□□ -1.74
PFK1	YGR240C	TAT1	P38085	619 aa		4.18	□□□□□ -1.74
PFK1	YGR240C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
PFK1	YGR240C	PHO88	P38264	188 aa	Predicted RBP	4.18	□□□□□ -1.74
PFK1	YGR240C	MMS21	P38632	267 aa		4.18	□□□□□ -1.74
PFK1	YGR240C	NDT80	P38830	627 aa		4.18	□□□□□ -1.74
PFK1	YGR240C	BDH1	P39714	382 aa		4.18	□□□□□ -1.74
PFK1	YGR240C	RRP45	Q05636	305 aa	Known RBP	4.18	□□□□□ -1.74
PFK1	YGR240C	MED2	Q12124	431 aa		4.18	□□□□□ -1.74
PFK1	YGR240C	TPT1	Q12272	230 aa	Known RBP	4.18	□□□□□ -1.74
PFK1	YGR240C	WTM1	Q12363	437 aa	Known RBP	4.18	□□□□□ -1.74
PFK1	YGR240C	DFG16	Q99234	619 aa		4.18	□□□□□ -1.74
PFK1	YGR240C	UBA3	Q99344	299 aa		4.18	□□□□□ -1.74
PFK1	YGR240C	ARG1	P22768	420 aa		4.18	□□□□□ -1.74
PFK1	YGR240C	RRT12	P25381	491 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms