RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W SOF1P33750 489 aaKnown RBP4.12□□□□□ -1.75
PRE9YGR135W UTP30P36144 274 aaKnown RBP4.12□□□□□ -1.75
PRE9YGR135W DAD2P36162 133 aa4.12□□□□□ -1.75
PRE9YGR135W MOH1P38191 138 aa4.12□□□□□ -1.75
PRE9YGR135W IST2P38250 946 aa4.12□□□□□ -1.75
PRE9YGR135W PHO88P38264 188 aaPredicted RBP4.12□□□□□ -1.75
PRE9YGR135W KSP1P38691 1029 aaKnown RBP4.12□□□□□ -1.75
PRE9YGR135W AVT2P39981 480 aa4.12□□□□□ -1.75
PRE9YGR135W FMP52P40008 231 aa4.12□□□□□ -1.75
PRE9YGR135W ELP2P42935 788 aa4.12□□□□□ -1.75
PRE9YGR135W BUL1P48524 976 aa4.12□□□□□ -1.75
PRE9YGR135W ASN1P49089 572 aaKnown RBP4.12□□□□□ -1.75
PRE9YGR135W SOL4P53315 255 aa4.12□□□□□ -1.75
PRE9YGR135W YNL010WP53981 241 aaKnown RBP4.12□□□□□ -1.75
PRE9YGR135W AAT1Q01802 451 aa4.12□□□□□ -1.75
PRE9YGR135W ELP3Q02908 557 aaKnown RBP4.12□□□□□ -1.75
PRE9YGR135W DML1Q03652 475 aa4.12□□□□□ -1.75
PRE9YGR135W YMR111CQ04461 462 aaPredicted RBP4.12□□□□□ -1.75
PRE9YGR135W PEX10Q05568 337 aa4.12□□□□□ -1.75
PRE9YGR135W YDL073WQ07454 984 aa4.12□□□□□ -1.75
PRE9YGR135W YDL242WQ07746 117 aa4.12□□□□□ -1.75
PRE9YGR135W CRT10Q08226 957 aa4.12□□□□□ -1.75
PRE9YGR135W YOL159CQ08300 171 aa4.12□□□□□ -1.75
PRE9YGR135W IES4Q08561 116 aa4.12□□□□□ -1.75
PRE9YGR135W ULA1Q12059 462 aa4.12□□□□□ -1.75
PRE9YGR135W NSL1Q12143 216 aa4.12□□□□□ -1.75
PRE9YGR135W TY3A-GQ12173 290 aa4.12□□□□□ -1.75
PRE9YGR135W RKI1Q12189 258 aa4.12□□□□□ -1.75
PRE9YGR135W TY3A-IQ99219 290 aa4.12□□□□□ -1.75
PRE9YGR135W MED11Q99278 115 aa4.12□□□□□ -1.75
PRE9YGR135W SIR3P06701 978 aa4.11□□□□□ -1.75
PRE9YGR135W RPL1AP0CX43 217 aaKnown RBP4.11□□□□□ -1.75
PRE9YGR135W RPL1BP0CX44 217 aaKnown RBP4.11□□□□□ -1.75
PRE9YGR135W KGD1P20967 1014 aaKnown RBP4.11□□□□□ -1.75
PRE9YGR135W YSP3P25036 478 aa4.11□□□□□ -1.75
PRE9YGR135W DMC1P25453 334 aa4.11□□□□□ -1.75
PRE9YGR135W CRM1P30822 1084 aaKnown RBP4.11□□□□□ -1.75
PRE9YGR135W RGT1P32862 1170 aa4.11□□□□□ -1.75
PRE9YGR135W YBR144CP34215 104 aa4.11□□□□□ -1.75
PRE9YGR135W ECM13P38195 257 aa4.11□□□□□ -1.75
PRE9YGR135W ECM8P38246 354 aa4.11□□□□□ -1.75
PRE9YGR135W RPH1P39956 796 aa4.11□□□□□ -1.75
PRE9YGR135W YAT2P40017 923 aa4.11□□□□□ -1.75
PRE9YGR135W YJL070CP40361 888 aa4.11□□□□□ -1.75
PRE9YGR135W LAS21P40367 830 aa4.11□□□□□ -1.75
PRE9YGR135W PAC11P40960 533 aa4.11□□□□□ -1.75
PRE9YGR135W FET5P43561 622 aa4.11□□□□□ -1.75
PRE9YGR135W FAR7P43592 221 aa4.11□□□□□ -1.75
PRE9YGR135W PTR3P43606 678 aa4.11□□□□□ -1.75
PRE9YGR135W MSY1P48527 492 aa4.11□□□□□ -1.75
PRE9YGR135W CWC23P52868 283 aaPredicted RBP4.11□□□□□ -1.75
PRE9YGR135W AIF1P52923 378 aa4.11□□□□□ -1.75
PRE9YGR135W RTT102P53330 157 aa4.11□□□□□ -1.75
PRE9YGR135W YNL095CP53932 642 aa4.11□□□□□ -1.75
PRE9YGR135W COG5P53951 403 aa4.11□□□□□ -1.75
PRE9YGR135W SLD5Q03406 294 aa4.11□□□□□ -1.75
PRE9YGR135W RBS1Q05672 457 aaKnown RBP4.11□□□□□ -1.75
PRE9YGR135W CDC123Q05791 360 aa4.11□□□□□ -1.75
PRE9YGR135W MCP2Q06567 569 aa4.11□□□□□ -1.75
PRE9YGR135W DTD1Q07648 150 aaKnown RBP4.11□□□□□ -1.75
PRE9YGR135W YLR040CQ07988 224 aa4.11□□□□□ -1.75
PRE9YGR135W ESA1Q08649 445 aa4.11□□□□□ -1.75
PRE9YGR135W THP3Q12049 470 aaKnown RBP4.11□□□□□ -1.75
PRE9YGR135W DCP1Q12517 231 aaPredicted RBP4.11□□□□□ -1.75
PRE9YGR135W IZH4Q99393 312 aa4.11□□□□□ -1.75
PRE9YGR135W PMD1P32634 1753 aa4.11□□□□□ -1.75
PRE9YGR135W HKR1P41809 1802 aa4.11□□□□□ -1.75
PRE9YGR135W AAC1P04710 309 aa4.1□□□□□ -1.75
PRE9YGR135W KGD2P19262 463 aaPredicted RBP4.1□□□□□ -1.75
PRE9YGR135W CCA1P21269 546 aa4.1□□□□□ -1.75
PRE9YGR135W PHO91P27514 894 aa4.1□□□□□ -1.75
PRE9YGR135W UBC8P28263 218 aa4.1□□□□□ -1.75
PRE9YGR135W YJU2P28320 278 aaPredicted RBP4.1□□□□□ -1.75
PRE9YGR135W PEX3P28795 441 aa4.1□□□□□ -1.75
PRE9YGR135W APE2P32454 952 aaKnown RBP4.1□□□□□ -1.75
PRE9YGR135W GSH1P32477 678 aa4.1□□□□□ -1.75
PRE9YGR135W HIR2P32480 875 aa4.1□□□□□ -1.75
PRE9YGR135W TUL1P36096 758 aa4.1□□□□□ -1.75
PRE9YGR135W NTC20P38302 140 aaPredicted RBP4.1□□□□□ -1.75
PRE9YGR135W YHR218WP38899 603 aa4.1□□□□□ -1.75
PRE9YGR135W THO1P40040 218 aaKnown RBP4.1□□□□□ -1.75
PRE9YGR135W RTT105P40063 208 aa4.1□□□□□ -1.75
PRE9YGR135W JLP2P40206 208 aa4.1□□□□□ -1.75
PRE9YGR135W ASG7P46993 209 aa4.1□□□□□ -1.75
PRE9YGR135W GLG2P47011 380 aa4.1□□□□□ -1.75
PRE9YGR135W YJL132WP47014 750 aa4.1□□□□□ -1.75
PRE9YGR135W DPB11P47027 764 aaPredicted RBP4.1□□□□□ -1.75
PRE9YGR135W RTT101P47050 842 aa4.1□□□□□ -1.75
PRE9YGR135W EFM3P47163 339 aa4.1□□□□□ -1.75
PRE9YGR135W DIE2P50076 525 aa4.1□□□□□ -1.75
PRE9YGR135W ARO8P53090 500 aaKnown RBP4.1□□□□□ -1.75
PRE9YGR135W CLD1P53264 445 aa4.1□□□□□ -1.75
PRE9YGR135W SNF12P53628 566 aa4.1□□□□□ -1.75
PRE9YGR135W RHO5P53879 331 aaKnown RBP4.1□□□□□ -1.75
PRE9YGR135W YNL146WP53906 100 aa4.1□□□□□ -1.75
PRE9YGR135W RPL6AQ02326 176 aaKnown RBP4.1□□□□□ -1.75
PRE9YGR135W ECM30Q06673 1274 aa4.1□□□□□ -1.75
PRE9YGR135W PML1Q07930 204 aaPredicted RBP4.1□□□□□ -1.75
PRE9YGR135W YOL073CQ08232 322 aa4.1□□□□□ -1.75
PRE9YGR135W SLD7Q08457 257 aa4.1□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms