RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W SPS4P09937 338 aa7.67□□□□□ -1.18
UFD1YGR048W TCP1P12612 559 aaKnown RBP7.67□□□□□ -1.18
UFD1YGR048W MAG1P22134 296 aaKnown RBP7.67□□□□□ -1.18
UFD1YGR048W MNE1P24720 663 aa7.67□□□□□ -1.18
UFD1YGR048W FAA1P30624 700 aaKnown RBP7.67□□□□□ -1.18
UFD1YGR048W SYN8P31377 255 aa7.67□□□□□ -1.18
UFD1YGR048W OAR1P35731 278 aa7.67□□□□□ -1.18
UFD1YGR048W SRY1P36007 326 aa7.67□□□□□ -1.18
UFD1YGR048W YKL162CP36052 402 aa7.67□□□□□ -1.18
UFD1YGR048W KAE1P36132 386 aa7.67□□□□□ -1.18
UFD1YGR048W MRPL36P36531 177 aa7.67□□□□□ -1.18
UFD1YGR048W RIB1P38066 345 aa7.67□□□□□ -1.18
UFD1YGR048W FTH1P38310 465 aa7.67□□□□□ -1.18
UFD1YGR048W UBX7P38349 436 aa7.67□□□□□ -1.18
UFD1YGR048W RCK1P38622 512 aa7.67□□□□□ -1.18
UFD1YGR048W YER010CP40011 234 aa7.67□□□□□ -1.18
UFD1YGR048W PRM2P40534 656 aa7.67□□□□□ -1.18
UFD1YGR048W PMT4P46971 762 aa7.67□□□□□ -1.18
UFD1YGR048W YPR003CP53394 754 aa7.67□□□□□ -1.18
UFD1YGR048W LSM3P57743 89 aaKnown RBP7.67□□□□□ -1.18
UFD1YGR048W CWC27Q02770 301 aa7.67□□□□□ -1.18
UFD1YGR048W ODC1Q03028 310 aa7.67□□□□□ -1.18
UFD1YGR048W RUB1Q03919 77 aa7.67□□□□□ -1.18
UFD1YGR048W CAC2Q04199 468 aa7.67□□□□□ -1.18
UFD1YGR048W YMR034CQ05131 434 aaPredicted RBP7.67□□□□□ -1.18
UFD1YGR048W VID22Q05934 901 aa7.67□□□□□ -1.18
UFD1YGR048W TMA10Q06177 86 aa7.67□□□□□ -1.18
UFD1YGR048W CYK3Q07533 885 aa7.67□□□□□ -1.18
UFD1YGR048W ESC8Q08119 714 aa7.67□□□□□ -1.18
UFD1YGR048W YOL019WQ08157 551 aa7.67□□□□□ -1.18
UFD1YGR048W YOR059CQ08448 450 aaKnown RBP7.67□□□□□ -1.18
UFD1YGR048W YLL056CQ12177 298 aa7.67□□□□□ -1.18
UFD1YGR048W MPD2Q99316 277 aa7.67□□□□□ -1.18
UFD1YGR048W TIM9O74700 87 aa7.66□□□□□ -1.18
UFD1YGR048W TRP3P00937 484 aa7.66□□□□□ -1.18
UFD1YGR048W CHS1P08004 1131 aa7.66□□□□□ -1.18
UFD1YGR048W RPL8AP17076 256 aaKnown RBP7.66□□□□□ -1.18
UFD1YGR048W UTR1P21373 530 aa7.66□□□□□ -1.18
UFD1YGR048W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
UFD1YGR048W DCC1P25559 380 aa7.66□□□□□ -1.18
UFD1YGR048W GID7P25569 745 aa7.66□□□□□ -1.18
UFD1YGR048W EMC1P25574 760 aa7.66□□□□□ -1.18
UFD1YGR048W YCR015CP25616 317 aa7.66□□□□□ -1.18
UFD1YGR048W BUB3P26449 341 aa7.66□□□□□ -1.18
UFD1YGR048W SSS1P35179 80 aa7.66□□□□□ -1.18
UFD1YGR048W YNK1P36010 153 aaKnown RBP7.66□□□□□ -1.18
UFD1YGR048W TCM62P38228 572 aaKnown RBP7.66□□□□□ -1.18
UFD1YGR048W FET3P38993 636 aa7.66□□□□□ -1.18
UFD1YGR048W ISC1P40015 477 aaKnown RBP7.66□□□□□ -1.18
UFD1YGR048W COG3P40094 801 aa7.66□□□□□ -1.18
UFD1YGR048W IRC24P40580 263 aa7.66□□□□□ -1.18
UFD1YGR048W YJL132WP47014 750 aa7.66□□□□□ -1.18
UFD1YGR048W YGR053CP53234 283 aa7.66□□□□□ -1.18
UFD1YGR048W GND2P53319 492 aa7.66□□□□□ -1.18
UFD1YGR048W ERV25P54837 211 aaKnown RBP7.66□□□□□ -1.18
UFD1YGR048W PRP38Q00723 242 aaPredicted RBP7.66□□□□□ -1.18
UFD1YGR048W MRPS17Q03246 237 aaPredicted RBP7.66□□□□□ -1.18
UFD1YGR048W YMR160WQ03823 816 aa7.66□□□□□ -1.18
UFD1YGR048W YDR131CQ03899 556 aa7.66□□□□□ -1.18
UFD1YGR048W YMR130WQ04223 302 aa7.66□□□□□ -1.18
UFD1YGR048W HOF1Q05080 669 aa7.66□□□□□ -1.18
UFD1YGR048W CDC123Q05791 360 aa7.66□□□□□ -1.18
UFD1YGR048W IRC3Q06683 689 aa7.66□□□□□ -1.18
UFD1YGR048W PML1Q07930 204 aaPredicted RBP7.66□□□□□ -1.18
UFD1YGR048W FMP25Q08023 583 aa7.66□□□□□ -1.18
UFD1YGR048W YOL131WQ08270 108 aa7.66□□□□□ -1.18
UFD1YGR048W RKM5Q12367 367 aa7.66□□□□□ -1.18
UFD1YGR048W VMA9Q3E7B6 73 aa7.66□□□□□ -1.18
UFD1YGR048W ARG80P07249 177 aa7.65□□□□□ -1.18
UFD1YGR048W FUM1P08417 488 aaKnown RBP7.65□□□□□ -1.18
UFD1YGR048W RNA15P25299 296 aaPredicted RBP7.65□□□□□ -1.18
UFD1YGR048W YCR102CP25608 368 aa7.65□□□□□ -1.18
UFD1YGR048W YUR1P26725 428 aa7.65□□□□□ -1.18
UFD1YGR048W PRP45P28004 379 aaPredicted RBP7.65□□□□□ -1.18
UFD1YGR048W YSC83P32792 385 aa7.65□□□□□ -1.18
UFD1YGR048W WBP1P33767 430 aaKnown RBP7.65□□□□□ -1.18
UFD1YGR048W ASK1P35734 292 aa7.65□□□□□ -1.18
UFD1YGR048W SNU114P36048 1008 aaKnown RBP7.65□□□□□ -1.18
UFD1YGR048W TUL1P36096 758 aa7.65□□□□□ -1.18
UFD1YGR048W RSP5P39940 809 aaKnown RBP7.65□□□□□ -1.18
UFD1YGR048W ATM1P40416 690 aa7.65□□□□□ -1.18
UFD1YGR048W ADO1P47143 340 aaKnown RBP7.65□□□□□ -1.18
UFD1YGR048W MCM22P47167 239 aa7.65□□□□□ -1.18
UFD1YGR048W GCV1P48015 400 aa7.65□□□□□ -1.18
UFD1YGR048W RRT6P53117 311 aaPredicted RBP7.65□□□□□ -1.18
UFD1YGR048W MPC1P53157 130 aaKnown RBP7.65□□□□□ -1.18
UFD1YGR048W YGL039WP53183 348 aaKnown RBP7.65□□□□□ -1.18
UFD1YGR048W CDC55Q00362 526 aa7.65□□□□□ -1.18
UFD1YGR048W IRC4Q03036 179 aa7.65□□□□□ -1.18
UFD1YGR048W RLI1Q03195 608 aaKnown RBP7.65□□□□□ -1.18
UFD1YGR048W EAR1Q03212 550 aa7.65□□□□□ -1.18
UFD1YGR048W YMD8Q03697 442 aa7.65□□□□□ -1.18
UFD1YGR048W DOT1Q04089 582 aaKnown RBP7.65□□□□□ -1.18
UFD1YGR048W NHX1Q04121 633 aa7.65□□□□□ -1.18
UFD1YGR048W RRT8Q08219 342 aa7.65□□□□□ -1.18
UFD1YGR048W YRF1-3P0CX14 1859 aa7.64□□□□□ -1.19
UFD1YGR048W YRF1-7P0CX15 1859 aa7.64□□□□□ -1.19
UFD1YGR048W YRF1-6P53819 1859 aa7.64□□□□□ -1.19
UFD1YGR048W PHO5P00635 467 aa7.64□□□□□ -1.19
UFD1YGR048W GAL80P04387 435 aa7.64□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms