RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W FRE7Q12333 620 aa6.31□□□□□ -1.4
NUP49YGL172W PUT2P07275 575 aa6.3□□□□□ -1.4
NUP49YGL172W CDC26P14724 124 aa6.3□□□□□ -1.4
NUP49YGL172W CMK2P22517 447 aa6.3□□□□□ -1.4
NUP49YGL172W CLB3P24870 427 aa6.3□□□□□ -1.4
NUP49YGL172W ARP2P32381 391 aaKnown RBP6.3□□□□□ -1.4
NUP49YGL172W DCG1P32460 244 aa6.3□□□□□ -1.4
NUP49YGL172W MKK2P32491 506 aa6.3□□□□□ -1.4
NUP49YGL172W TUL1P36096 758 aa6.3□□□□□ -1.4
NUP49YGL172W BET3P36149 193 aa6.3□□□□□ -1.4
NUP49YGL172W MBP1P39678 833 aa6.3□□□□□ -1.4
NUP49YGL172W VPS52P39904 641 aa6.3□□□□□ -1.4
NUP49YGL172W TPA1P40032 644 aaKnown RBP6.3□□□□□ -1.4
NUP49YGL172W RPS12P48589 143 aaKnown RBP6.3□□□□□ -1.4
NUP49YGL172W COS6P53344 381 aa6.3□□□□□ -1.4
NUP49YGL172W YNR068CP53754 272 aa6.3□□□□□ -1.4
NUP49YGL172W DSL1P53847 754 aa6.3□□□□□ -1.4
NUP49YGL172W YNL181WP53878 407 aa6.3□□□□□ -1.4
NUP49YGL172W YKU80Q04437 629 aa6.3□□□□□ -1.4
NUP49YGL172W HFD1Q04458 532 aa6.3□□□□□ -1.4
NUP49YGL172W ATG38Q05789 226 aaKnown RBP6.3□□□□□ -1.4
NUP49YGL172W VID22Q05934 901 aa6.3□□□□□ -1.4
NUP49YGL172W THP1Q08231 455 aa6.3□□□□□ -1.4
NUP49YGL172W DCI1Q08558 271 aa6.3□□□□□ -1.4
NUP49YGL172W MCA1Q08601 432 aa6.3□□□□□ -1.4
NUP49YGL172W BSC1Q12140 328 aa6.3□□□□□ -1.4
NUP49YGL172W PFK27Q12471 397 aaPredicted RBP6.3□□□□□ -1.4
NUP49YGL172W MHF2Q3E829 80 aa6.3□□□□□ -1.4
NUP49YGL172W TIM9O74700 87 aa6.29□□□□□ -1.4
NUP49YGL172W MF(ALPHA)1P01149 165 aa6.29□□□□□ -1.4
NUP49YGL172W HOM3P10869 527 aa6.29□□□□□ -1.4
NUP49YGL172W RPS1BP23248 255 aaKnown RBP6.29□□□□□ -1.4
NUP49YGL172W NTG1P31378 399 aa6.29□□□□□ -1.4
NUP49YGL172W LYP1P32487 611 aa6.29□□□□□ -1.4
NUP49YGL172W NAB2P32505 525 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
NUP49YGL172W VPS51P36116 164 aa6.29□□□□□ -1.4
NUP49YGL172W FES1P38260 290 aa6.29□□□□□ -1.4
NUP49YGL172W TSL1P38427 1098 aaKnown RBP6.29□□□□□ -1.4
NUP49YGL172W ATP22P50273 684 aaPredicted RBP6.29□□□□□ -1.4
NUP49YGL172W YNL095CP53932 642 aa6.29□□□□□ -1.4
NUP49YGL172W PEX25Q02969 394 aa6.29□□□□□ -1.4
NUP49YGL172W SPO77Q06134 477 aa6.29□□□□□ -1.4
NUP49YGL172W EMG1Q06287 252 aaKnown RBP6.29□□□□□ -1.4
NUP49YGL172W YPR091CQ06833 770 aa6.29□□□□□ -1.4
NUP49YGL172W NBA1Q08229 501 aaKnown RBP6.29□□□□□ -1.4
NUP49YGL172W WTM1Q12363 437 aaKnown RBP6.29□□□□□ -1.4
NUP49YGL172W YDL199CQ12407 687 aa6.29□□□□□ -1.4
NUP49YGL172W TMA17Q12513 150 aa6.29□□□□□ -1.4
NUP49YGL172W MDM12Q92328 271 aa6.29□□□□□ -1.4
NUP49YGL172W COX1P00401 534 aa6.28□□□□□ -1.4
NUP49YGL172W RPS31P05759 152 aaKnown RBP6.28□□□□□ -1.4
NUP49YGL172W AAC3P18238 307 aa6.28□□□□□ -1.4
NUP49YGL172W PMT2P31382 759 aa6.28□□□□□ -1.4
NUP49YGL172W SWD1P39706 426 aa6.28□□□□□ -1.4
NUP49YGL172W RBG1P39729 369 aa6.28□□□□□ -1.4
NUP49YGL172W YTA6P40328 754 aa6.28□□□□□ -1.4
NUP49YGL172W ILM1P47155 203 aa6.28□□□□□ -1.4
NUP49YGL172W MAL11P53048 616 aa6.28□□□□□ -1.4
NUP49YGL172W TPC1P53257 314 aa6.28□□□□□ -1.4
NUP49YGL172W IGO1P53897 168 aa6.28□□□□□ -1.4
NUP49YGL172W YPR172WQ06608 200 aa6.28□□□□□ -1.4
NUP49YGL172W HDA2Q06629 674 aa6.28□□□□□ -1.4
NUP49YGL172W YOR378WQ08902 515 aa6.28□□□□□ -1.4
NUP49YGL172W PSY3Q12318 242 aa6.28□□□□□ -1.4
NUP49YGL172W CYR1P08678 2026 aaKnown RBP6.28□□□□□ -1.4
NUP49YGL172W YAK1P14680 807 aa6.27□□□□□ -1.41
NUP49YGL172W GLK1P17709 500 aaKnown RBP6.27□□□□□ -1.41
NUP49YGL172W DBP3P20447 523 aaKnown RBP6.27□□□□□ -1.41
NUP49YGL172W MCK1P21965 375 aaKnown RBP6.27□□□□□ -1.41
NUP49YGL172W GPI12P23797 304 aa6.27□□□□□ -1.41
NUP49YGL172W YIM1P28625 365 aa6.27□□□□□ -1.41
NUP49YGL172W PDR3P33200 976 aa6.27□□□□□ -1.41
NUP49YGL172W RIB1P38066 345 aa6.27□□□□□ -1.41
NUP49YGL172W YBR241CP38142 488 aa6.27□□□□□ -1.41
NUP49YGL172W SEA4P38164 1038 aa6.27□□□□□ -1.41
NUP49YGL172W BIG1P38813 335 aa6.27□□□□□ -1.41
NUP49YGL172W BAP3P41815 604 aa6.27□□□□□ -1.41
NUP49YGL172W ALB1P47019 175 aaPredicted RBP6.27□□□□□ -1.41
NUP49YGL172W YJR141WP47172 347 aaPredicted RBP6.27□□□□□ -1.41
NUP49YGL172W HSV2P50079 448 aaPredicted RBP6.27□□□□□ -1.41
NUP49YGL172W SPT20P50875 604 aa6.27□□□□□ -1.41
NUP49YGL172W YGR067CP53243 804 aa6.27□□□□□ -1.41
NUP49YGL172W SPR6Q01684 191 aa6.27□□□□□ -1.41
NUP49YGL172W SKI8Q02793 397 aaPredicted RBP6.27□□□□□ -1.41
NUP49YGL172W RSC9Q03124 581 aa6.27□□□□□ -1.41
NUP49YGL172W HMO1Q03973 246 aaKnown RBP6.27□□□□□ -1.41
NUP49YGL172W RAD30Q04049 632 aa6.27□□□□□ -1.41
NUP49YGL172W KRE28Q04431 385 aa6.27□□□□□ -1.41
NUP49YGL172W RRT8Q08219 342 aa6.27□□□□□ -1.41
NUP49YGL172W YOR365CQ08844 703 aa6.27□□□□□ -1.41
NUP49YGL172W TMA7Q3E764 64 aaKnown RBP6.27□□□□□ -1.41
NUP49YGL172W YSF3P0C074 85 aaPredicted RBP6.26□□□□□ -1.41
NUP49YGL172W RER1P25560 188 aa6.26□□□□□ -1.41
NUP49YGL172W GDH2P33327 1092 aaKnown RBP6.26□□□□□ -1.41
NUP49YGL172W LST4P34239 828 aa6.26□□□□□ -1.41
NUP49YGL172W TEF4P36008 412 aaKnown RBP6.26□□□□□ -1.41
NUP49YGL172W IFA38P38286 347 aa6.26□□□□□ -1.41
NUP49YGL172W PZF1P39933 429 aa6.26□□□□□ -1.41
NUP49YGL172W YGR201CP42936 225 aa6.26□□□□□ -1.41
NUP49YGL172W YFL066CP43538 392 aa6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms