RNA–Protein interactions for RNA: YGL120C

PRP43, Transcript of RNA helicase in the DEAH-box family, yeast

Gene PRP43, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP43	YGL120C	COX4	P04037	155 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	HAP2	P06774	265 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	ERG9	P29704	444 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	FAA1	P30624	700 aa	Known RBP	4.58	□□□□□ -1.68
PRP43	YGL120C	CYS3	P31373	394 aa	Known RBP	4.58	□□□□□ -1.68
PRP43	YGL120C	SFP1	P32432	683 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	TRM2	P33753	639 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	SKT5	P34226	696 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	SPT23	P35210	1082 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	DAD2	P36162	133 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	VBA5	P36172	582 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	RFC4	P40339	323 aa	Known RBP	4.58	□□□□□ -1.68
PRP43	YGL120C	YKE4	P40544	346 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	ATF2	P53296	535 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	YNL134C	P53912	376 aa	Known RBP	4.58	□□□□□ -1.68
PRP43	YGL120C	YPL108W	Q02872	168 aa	Predicted RBP	4.58	□□□□□ -1.68
PRP43	YGL120C	RKM2	Q03942	479 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	SMA2	Q04658	369 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	COQ9	Q05779	260 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	YPS7	Q06325	596 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	CDC73	Q06697	393 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	TUM1	Q08686	304 aa	Known RBP	4.58	□□□□□ -1.68
PRP43	YGL120C	YPL150W	Q12152	901 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	PET20	Q99373	253 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	YBR085C-A	O43137	85 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	MRPL9	P31334	269 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	YPT7	P32939	208 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	UPS2	P35200	230 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	YBR284W	P38150	797 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	SFB3	P38810	929 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	DHH1	P39517	506 aa	Known RBP	4.58	□□□□□ -1.68
PRP43	YGL120C	VRG4	P40107	337 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	ALK1	P43633	760 aa	Known RBP	4.58	□□□□□ -1.68
PRP43	YGL120C	MNN5	P46982	586 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	YJL132W	P47014	750 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	IRC18	P47056	224 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	MOG1	P47123	218 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	HLJ1	P48353	224 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	SOK2	P53438	785 aa	Predicted RBP	4.58	□□□□□ -1.68
PRP43	YGL120C	HHO1	P53551	258 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	RPA49	Q01080	415 aa	Predicted RBP	4.58	□□□□□ -1.68
PRP43	YGL120C	YPL071C	Q02864	156 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	CSM3	Q04659	317 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	CRF1	Q04930	467 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	YLR036C	Q07986	203 aa		4.58	□□□□□ -1.68
PRP43	YGL120C	DUR1,2	P32528	1835 aa	Known RBP	4.58	□□□□□ -1.68
PRP43	YGL120C	ERG11	P10614	530 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	YCK1	P23291	538 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	POF1	P25576	258 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	ISC10	P32645	267 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
PRP43	YGL120C	UGP1	P32861	499 aa	Known RBP	4.57	□□□□□ -1.68
PRP43	YGL120C	SSS1	P35179	80 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	KKQ8	P36004	724 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	YPT53	P36019	220 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	GLC8	P41818	229 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	SSU1	P41930	458 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	BIO3	P50277	480 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	SNP1	Q00916	300 aa	Predicted RBP	4.57	□□□□□ -1.68
PRP43	YGL120C	STP1	Q00947	519 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	AAT1	Q01802	451 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	SHR3	Q02774	210 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	MSC2	Q03455	724 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	GIS1	Q03833	894 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	MUS81	Q04149	632 aa	Predicted RBP	4.57	□□□□□ -1.68
PRP43	YGL120C	YDR391C	Q04170	232 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	CAC2	Q04199	468 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	YDR124W	Q04608	324 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	YLR225C	Q05948	407 aa	Known RBP	4.57	□□□□□ -1.68
PRP43	YGL120C	NUT2	Q06213	157 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	CRT10	Q08226	957 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	GRE1	Q08969	168 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	SRL2	Q12020	392 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	MRPL23	Q12487	163 aa	Predicted RBP	4.57	□□□□□ -1.68
PRP43	YGL120C	DCP1	Q12517	231 aa	Predicted RBP	4.57	□□□□□ -1.68
PRP43	YGL120C	DOP1	Q03921	1698 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	TPK1	P06244	397 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	RAD18	P10862	487 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	RPL3	P14126	387 aa	Known RBP	4.57	□□□□□ -1.68
PRP43	YGL120C	CKA1	P15790	372 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	EXG1	P23776	448 aa	Known RBP	4.57	□□□□□ -1.68
PRP43	YGL120C	DAL2	P25335	343 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	PEX4	P29340	183 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	SPR1	P32603	445 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	MNS1	P32906	549 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	YBR285W	P38354	144 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	MLH1	P38920	769 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	YIL067C	P40514	678 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	PET130	P47065	347 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	SNN1	P48232	102 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	GND2	P53319	492 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	SLM2	P53955	656 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	APC4	Q04601	652 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	YLR297W	Q05899	129 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	DUS4	Q06063	367 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	TMA10	Q06177	86 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	YPR078C	Q06813	372 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	MDM32	Q12171	622 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	YPR1	Q12458	312 aa		4.57	□□□□□ -1.68
PRP43	YGL120C	REP2	P03872	296 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms