RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C SEC62P21825 274 aa2.79□□□□□ -1.96
MSH4YFL003C PSO2P30620 661 aa2.79□□□□□ -1.96
MSH4YFL003C PTK1P36002 662 aaPredicted RBP2.79□□□□□ -1.96
MSH4YFL003C BFR1P38934 470 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
MSH4YFL003C BRO1P48582 844 aa2.79□□□□□ -1.96
MSH4YFL003C AVT4P50944 713 aa2.79□□□□□ -1.96
MSH4YFL003C SCW4P53334 386 aaKnown RBP2.79□□□□□ -1.96
MSH4YFL003C FRE4P53746 719 aa2.79□□□□□ -1.96
MSH4YFL003C TAF12Q03761 539 aa2.79□□□□□ -1.96
MSH4YFL003C RPL12AP0CX53 165 aaKnown RBP2.78□□□□□ -1.96
MSH4YFL003C RPL12BP0CX54 165 aa2.78□□□□□ -1.96
MSH4YFL003C THR4P16120 514 aaKnown RBP2.78□□□□□ -1.96
MSH4YFL003C NRP1P32770 719 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
MSH4YFL003C COY1P34237 679 aa2.78□□□□□ -1.96
MSH4YFL003C SCO2P38072 301 aa2.78□□□□□ -1.96
MSH4YFL003C SPP381P38282 291 aaPredicted RBP2.78□□□□□ -1.96
MSH4YFL003C AIM20P40451 204 aa2.78□□□□□ -1.96
MSH4YFL003C PCI8P40512 444 aa2.78□□□□□ -1.96
MSH4YFL003C IRC15Q02733 499 aa2.78□□□□□ -1.96
MSH4YFL003C MRPL23Q12487 163 aaPredicted RBP2.78□□□□□ -1.96
MSH4YFL003C RNR2P09938 399 aaKnown RBP2.78□□□□□ -1.96
MSH4YFL003C RPI1P23250 407 aaKnown RBP2.78□□□□□ -1.96
MSH4YFL003C REC114P32841 428 aa2.78□□□□□ -1.96
MSH4YFL003C ATO2P32907 282 aa2.78□□□□□ -1.96
MSH4YFL003C KAP104P38217 918 aaKnown RBP2.78□□□□□ -1.96
MSH4YFL003C PAC11P40960 533 aa2.78□□□□□ -1.96
MSH4YFL003C RRN9P53437 365 aa2.78□□□□□ -1.96
MSH4YFL003C YPL068CQ02749 293 aa2.78□□□□□ -1.96
MSH4YFL003C STD1Q02794 444 aa2.78□□□□□ -1.96
MSH4YFL003C YEH2Q07950 538 aa2.78□□□□□ -1.96
MSH4YFL003C SKI7Q08491 747 aaPredicted RBP2.78□□□□□ -1.96
MSH4YFL003C SRL2Q12020 392 aa2.78□□□□□ -1.96
MSH4YFL003C AYT1Q12226 474 aa2.78□□□□□ -1.96
MSH4YFL003C HEM2P05373 342 aa2.77□□□□□ -1.97
MSH4YFL003C RPL15AP05748 204 aaKnown RBP2.77□□□□□ -1.97
MSH4YFL003C RPS16AP0CX51 143 aaKnown RBP2.77□□□□□ -1.97
MSH4YFL003C RPS16BP0CX52 143 aaKnown RBP2.77□□□□□ -1.97
MSH4YFL003C YCR100CP25606 316 aa2.77□□□□□ -1.97
MSH4YFL003C RPT5P33297 434 aaKnown RBP2.77□□□□□ -1.97
MSH4YFL003C YCR041WP37265 110 aa2.77□□□□□ -1.97
MSH4YFL003C YBL028CP38202 106 aa2.77□□□□□ -1.97
MSH4YFL003C MTC4P38335 694 aaKnown RBP2.77□□□□□ -1.97
MSH4YFL003C LAM5P43560 674 aa2.77□□□□□ -1.97
MSH4YFL003C GCD14P46959 383 aaPredicted RBP2.77□□□□□ -1.97
MSH4YFL003C ABM1P47146 123 aa2.77□□□□□ -1.97
MSH4YFL003C COS10P52924 374 aa2.77□□□□□ -1.97
MSH4YFL003C PNC1P53184 216 aaKnown RBP2.77□□□□□ -1.97
MSH4YFL003C ODC1Q03028 310 aa2.77□□□□□ -1.97
MSH4YFL003C YLR297WQ05899 129 aa2.77□□□□□ -1.97
MSH4YFL003C AIM45Q12480 344 aaKnown RBP2.77□□□□□ -1.97
MSH4YFL003C OPI3P05375 206 aa2.77□□□□□ -1.97
MSH4YFL003C APE2P32454 952 aaKnown RBP2.77□□□□□ -1.97
MSH4YFL003C GLC7P32598 312 aaKnown RBP2.77□□□□□ -1.97
MSH4YFL003C INM1P38710 295 aa2.77□□□□□ -1.97
MSH4YFL003C YHR122WP38829 231 aa2.77□□□□□ -1.97
MSH4YFL003C PCF11P39081 626 aaPredicted RBP2.77□□□□□ -1.97
MSH4YFL003C PHB2P50085 310 aa2.77□□□□□ -1.97
MSH4YFL003C YNR048WP53740 393 aa2.77□□□□□ -1.97
MSH4YFL003C SPO19Q03029 223 aa2.77□□□□□ -1.97
MSH4YFL003C CWC21Q03375 135 aaKnown RBP2.77□□□□□ -1.97
MSH4YFL003C URC2Q04411 772 aa2.77□□□□□ -1.97
MSH4YFL003C DSE3Q08729 430 aa2.77□□□□□ -1.97
MSH4YFL003C GCN2P15442 1659 aa2.77□□□□□ -1.97
MSH4YFL003C YKL070WP36087 169 aa2.76□□□□□ -1.97
MSH4YFL003C BZZ1P38822 633 aa2.76□□□□□ -1.97
MSH4YFL003C MET30P39014 640 aa2.76□□□□□ -1.97
MSH4YFL003C YIR016WP40572 265 aa2.76□□□□□ -1.97
MSH4YFL003C SPG5P42933 373 aa2.76□□□□□ -1.97
MSH4YFL003C IKS1P47042 667 aa2.76□□□□□ -1.97
MSH4YFL003C RTT102P53330 157 aa2.76□□□□□ -1.97
MSH4YFL003C HXT11P54862 567 aa2.76□□□□□ -1.97
MSH4YFL003C NUP53Q03790 475 aa2.76□□□□□ -1.97
MSH4YFL003C UGA1P17649 471 aa2.76□□□□□ -1.97
MSH4YFL003C CYS4P32582 507 aaKnown RBP2.76□□□□□ -1.97
MSH4YFL003C SWC5P38326 303 aa2.76□□□□□ -1.97
MSH4YFL003C RIB4P50861 169 aaPredicted RBP2.76□□□□□ -1.97
MSH4YFL003C PNG1Q02890 363 aa2.76□□□□□ -1.97
MSH4YFL003C ERV41Q04651 352 aa2.76□□□□□ -1.97
MSH4YFL003C APC5Q08683 685 aa2.76□□□□□ -1.97
MSH4YFL003C ATG34Q12292 412 aa2.76□□□□□ -1.97
MSH4YFL003C LDB17Q12342 491 aa2.76□□□□□ -1.97
MSH4YFL003C PDR11P40550 1411 aa2.76□□□□□ -1.97
MSH4YFL003C TDH1P00360 332 aaKnown RBP2.75□□□□□ -1.97
MSH4YFL003C CDC21P06785 304 aa2.75□□□□□ -1.97
MSH4YFL003C PET123P17558 318 aa2.75□□□□□ -1.97
MSH4YFL003C CBP4P37267 147 aa2.75□□□□□ -1.97
MSH4YFL003C RIM2P38127 377 aa2.75□□□□□ -1.97
MSH4YFL003C PEX18P38855 283 aa2.75□□□□□ -1.97
MSH4YFL003C END3P39013 349 aa2.75□□□□□ -1.97
MSH4YFL003C YIL169CP40442 995 aa2.75□□□□□ -1.97
MSH4YFL003C RTT101P47050 842 aa2.75□□□□□ -1.97
MSH4YFL003C HMS2P47175 358 aa2.75□□□□□ -1.97
MSH4YFL003C GTO1P48239 356 aa2.75□□□□□ -1.97
MSH4YFL003C DBP6P53734 629 aaKnown RBP2.75□□□□□ -1.97
MSH4YFL003C CAB5Q03941 241 aa2.75□□□□□ -1.97
MSH4YFL003C VAC14Q06708 880 aa2.75□□□□□ -1.97
MSH4YFL003C PEX27Q08580 376 aa2.75□□□□□ -1.97
MSH4YFL003C LSP1Q12230 341 aaKnown RBP2.75□□□□□ -1.97
MSH4YFL003C RUD3Q12234 484 aaKnown RBP2.75□□□□□ -1.97
MSH4YFL003C STE2D6VTK4 431 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms