RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	RPL6A	Q02326	176 aa	Known RBP	0.92	□□□□□ -2.26
UBP3	YER151C	DIG1	Q03063	452 aa	Known RBP	0.92	□□□□□ -2.26
UBP3	YER151C	RSM28	Q03430	361 aa		0.92	□□□□□ -2.26
UBP3	YER151C	TRM12	Q04235	462 aa		0.92	□□□□□ -2.26
UBP3	YER151C	YML096W	Q04489	525 aa		0.92	□□□□□ -2.26
UBP3	YER151C	SMA2	Q04658	369 aa		0.92	□□□□□ -2.26
UBP3	YER151C	BCH1	Q05029	724 aa		0.92	□□□□□ -2.26
UBP3	YER151C	DCS1	Q06151	350 aa		0.92	□□□□□ -2.26
UBP3	YER151C	ENT4	Q07872	247 aa		0.92	□□□□□ -2.26
UBP3	YER151C	CRT10	Q08226	957 aa		0.92	□□□□□ -2.26
UBP3	YER151C	SET6	Q12529	373 aa		0.92	□□□□□ -2.26
UBP3	YER151C	TDH2	P00358	332 aa	Known RBP	0.92	□□□□□ -2.26
UBP3	YER151C	TDH1	P00360	332 aa	Known RBP	0.92	□□□□□ -2.26
UBP3	YER151C	RPL6B	P05739	176 aa	Known RBP	0.92	□□□□□ -2.26
UBP3	YER151C	PET111	P08468	800 aa		0.92	□□□□□ -2.26
UBP3	YER151C	URA4	P20051	364 aa		0.92	□□□□□ -2.26
UBP3	YER151C	PUT3	P25502	979 aa	Predicted RBP	0.92	□□□□□ -2.26
UBP3	YER151C	NAM9	P27929	486 aa		0.92	□□□□□ -2.26
UBP3	YER151C	SWH1	P35845	1188 aa		0.92	□□□□□ -2.26
UBP3	YER151C	HSM3	P38348	480 aa		0.92	□□□□□ -2.26
UBP3	YER151C	YND1	P40009	630 aa		0.92	□□□□□ -2.26
UBP3	YER151C	YMR147W	P40218	223 aa	Known RBP	0.92	□□□□□ -2.26
UBP3	YER151C	APS3	P47064	194 aa		0.92	□□□□□ -2.26
UBP3	YER151C	MEP3	P53390	489 aa		0.92	□□□□□ -2.26
UBP3	YER151C	VPS72	Q03388	795 aa		0.92	□□□□□ -2.26
UBP3	YER151C	MZM1	Q03429	123 aa	Predicted RBP	0.92	□□□□□ -2.26
UBP3	YER151C	YMR111C	Q04461	462 aa	Predicted RBP	0.92	□□□□□ -2.26
UBP3	YER151C	ROY1	Q04847	553 aa		0.92	□□□□□ -2.26
UBP3	YER151C	VAM6	Q07468	1049 aa		0.92	□□□□□ -2.26
UBP3	YER151C	IWR1	Q07532	353 aa	Predicted RBP	0.92	□□□□□ -2.26
UBP3	YER151C	COS7	Q07788	383 aa		0.92	□□□□□ -2.26
UBP3	YER151C	CMS1	Q07897	291 aa	Known RBP	0.92	□□□□□ -2.26
UBP3	YER151C	YDR056C	Q12025	205 aa		0.92	□□□□□ -2.26
UBP3	YER151C	SMF3	Q12078	473 aa	Predicted RBP	0.92	□□□□□ -2.26
UBP3	YER151C	STE7	P06784	515 aa		0.91	□□□□□ -2.26
UBP3	YER151C	PRB1	P09232	635 aa		0.91	□□□□□ -2.26
UBP3	YER151C	CLN3	P13365	580 aa		0.91	□□□□□ -2.26
UBP3	YER151C	CDC23	P16522	626 aa		0.91	□□□□□ -2.26
UBP3	YER151C	UBA1	P22515	1024 aa	Known RBP	0.91	□□□□□ -2.26
UBP3	YER151C	CLB1	P24868	471 aa		0.91	□□□□□ -2.26
UBP3	YER151C	YCL042W	P25572	119 aa		0.91	□□□□□ -2.26
UBP3	YER151C	RDS1	P25611	832 aa		0.91	□□□□□ -2.26
UBP3	YER151C	FAA1	P30624	700 aa	Known RBP	0.91	□□□□□ -2.26
UBP3	YER151C	CYS4	P32582	507 aa	Known RBP	0.91	□□□□□ -2.26
UBP3	YER151C	CNS1	P33313	385 aa		0.91	□□□□□ -2.26
UBP3	YER151C	PRS3	P38689	320 aa	Known RBP	0.91	□□□□□ -2.26
UBP3	YER151C	ARN1	P38731	627 aa		0.91	□□□□□ -2.26
UBP3	YER151C	SMF2	P38778	549 aa		0.91	□□□□□ -2.26
UBP3	YER151C	SAW1	P39735	261 aa		0.91	□□□□□ -2.26
UBP3	YER151C	YER079W	P40052	210 aa	Known RBP	0.91	□□□□□ -2.26
UBP3	YER151C	TOS3	P43637	560 aa		0.91	□□□□□ -2.26
UBP3	YER151C	PMT4	P46971	762 aa		0.91	□□□□□ -2.26
UBP3	YER151C	CPR7	P47103	393 aa		0.91	□□□□□ -2.26
UBP3	YER151C	YPT11	P48559	417 aa		0.91	□□□□□ -2.26
UBP3	YER151C	YGR127W	P53275	312 aa		0.91	□□□□□ -2.26
UBP3	YER151C	CBK1	P53894	756 aa		0.91	□□□□□ -2.26
UBP3	YER151C	MTQ1	P53944	314 aa		0.91	□□□□□ -2.26
UBP3	YER151C	MSC1	Q03104	513 aa		0.91	□□□□□ -2.26
UBP3	YER151C	ENT5	Q03769	411 aa	Known RBP	0.91	□□□□□ -2.26
UBP3	YER151C	YDR278C	Q05612	105 aa		0.91	□□□□□ -2.26
UBP3	YER151C	NIP7	Q08962	181 aa	Known RBP	0.91	□□□□□ -2.26
UBP3	YER151C	GET4	Q12125	312 aa		0.91	□□□□□ -2.26
UBP3	YER151C	RRI1	Q12468	440 aa		0.91	□□□□□ -2.26
UBP3	YER151C	YBR255C-A	Q3E776	120 aa		0.91	□□□□□ -2.26
UBP3	YER151C	CBP6	P07253	162 aa	Predicted RBP	0.91	□□□□□ -2.26
UBP3	YER151C	UNG1	P12887	359 aa		0.91	□□□□□ -2.26
UBP3	YER151C	CKI1	P20485	582 aa		0.91	□□□□□ -2.26
UBP3	YER151C	PDE1	P22434	369 aa		0.91	□□□□□ -2.26
UBP3	YER151C	LAC1	P28496	418 aa		0.91	□□□□□ -2.26
UBP3	YER151C	SEC66	P33754	206 aa		0.91	□□□□□ -2.26
UBP3	YER151C	PEX5	P35056	612 aa		0.91	□□□□□ -2.26
UBP3	YER151C	ADO1	P47143	340 aa	Known RBP	0.91	□□□□□ -2.26
UBP3	YER151C	IMA1	P53051	589 aa		0.91	□□□□□ -2.26
UBP3	YER151C	YGL082W	P53155	381 aa		0.91	□□□□□ -2.26
UBP3	YER151C	PKP2	P53170	491 aa		0.91	□□□□□ -2.26
UBP3	YER151C	HOP2	P53187	214 aa		0.91	□□□□□ -2.26
UBP3	YER151C	SYF2	P53277	215 aa	Predicted RBP	0.91	□□□□□ -2.26
UBP3	YER151C	RCF2	P53721	224 aa		0.91	□□□□□ -2.26
UBP3	YER151C	MNT4	P53745	580 aa		0.91	□□□□□ -2.26
UBP3	YER151C	YPL108W	Q02872	168 aa	Predicted RBP	0.91	□□□□□ -2.26
UBP3	YER151C	PEX12	Q04370	399 aa		0.91	□□□□□ -2.26
UBP3	YER151C	YMR027W	Q04371	470 aa		0.91	□□□□□ -2.26
UBP3	YER151C	GMC1	Q04399	608 aa		0.91	□□□□□ -2.26
UBP3	YER151C	DCR2	Q05924	578 aa		0.91	□□□□□ -2.26
UBP3	YER151C	BUR2	Q05949	395 aa		0.91	□□□□□ -2.26
UBP3	YER151C	GAS2	Q06135	555 aa		0.91	□□□□□ -2.26
UBP3	YER151C	TEN1	Q07921	160 aa		0.91	□□□□□ -2.26
UBP3	YER151C	YPL191C	Q08930	360 aa		0.91	□□□□□ -2.26
UBP3	YER151C	TRM8	Q12009	286 aa		0.91	□□□□□ -2.26
UBP3	YER151C	YPQ1	Q12010	308 aa		0.91	□□□□□ -2.26
UBP3	YER151C	YPL150W	Q12152	901 aa		0.91	□□□□□ -2.26
UBP3	YER151C	MSW1	P04803	379 aa		0.9	□□□□□ -2.26
UBP3	YER151C	BGL2	P15703	313 aa	Known RBP	0.9	□□□□□ -2.26
UBP3	YER151C	YCR006C	P25350	157 aa		0.9	□□□□□ -2.26
UBP3	YER151C	CBT1	P36038	271 aa	Predicted RBP	0.9	□□□□□ -2.26
UBP3	YER151C	MRPL39	P36533	70 aa		0.9	□□□□□ -2.26
UBP3	YER151C	ASC1	P38011	319 aa	Known RBP	0.9	□□□□□ -2.26
UBP3	YER151C	YBP1	P38315	674 aa		0.9	□□□□□ -2.26
UBP3	YER151C	LAS21	P40367	830 aa		0.9	□□□□□ -2.26
UBP3	YER151C	XPT1	P47165	209 aa		0.9	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms