RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C KAR9P32526 644 aa2.79□□□□□ -1.96
VAB2YEL005C YKL097CP34245 136 aa2.79□□□□□ -1.96
VAB2YEL005C SPT10P35208 640 aa2.79□□□□□ -1.96
VAB2YEL005C MRPL4P36517 319 aa2.79□□□□□ -1.96
VAB2YEL005C SLX1P38324 304 aa2.79□□□□□ -1.96
VAB2YEL005C CHS6P40955 746 aa2.79□□□□□ -1.96
VAB2YEL005C URC2Q04411 772 aa2.79□□□□□ -1.96
VAB2YEL005C ECM7Q06200 448 aa2.79□□□□□ -1.96
VAB2YEL005C ASA1Q06822 443 aa2.79□□□□□ -1.96
VAB2YEL005C YFH1Q07540 174 aa2.79□□□□□ -1.96
VAB2YEL005C LDS2Q08218 356 aa2.79□□□□□ -1.96
VAB2YEL005C YGK3Q12222 375 aaPredicted RBP2.79□□□□□ -1.96
VAB2YEL005C RNH203Q12338 110 aa2.79□□□□□ -1.96
VAB2YEL005C HRT3Q12347 344 aa2.79□□□□□ -1.96
VAB2YEL005C AHC1Q12433 566 aa2.79□□□□□ -1.96
VAB2YEL005C PAB1P04147 577 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
VAB2YEL005C PHO84P25297 587 aaKnown RBP2.78□□□□□ -1.96
VAB2YEL005C PHA2P32452 334 aa2.78□□□□□ -1.96
VAB2YEL005C VPH1P32563 840 aaKnown RBP2.78□□□□□ -1.96
VAB2YEL005C DAD2P36162 133 aa2.78□□□□□ -1.96
VAB2YEL005C SPP381P38282 291 aaPredicted RBP2.78□□□□□ -1.96
VAB2YEL005C MLH1P38920 769 aa2.78□□□□□ -1.96
VAB2YEL005C SIM1P40472 476 aa2.78□□□□□ -1.96
VAB2YEL005C BIR1P47134 954 aa2.78□□□□□ -1.96
VAB2YEL005C STE24P47154 453 aa2.78□□□□□ -1.96
VAB2YEL005C YMR027WQ04371 470 aa2.78□□□□□ -1.96
VAB2YEL005C IPK1Q06667 281 aa2.78□□□□□ -1.96
VAB2YEL005C WTM1Q12363 437 aaKnown RBP2.78□□□□□ -1.96
VAB2YEL005C FRE6Q12473 712 aa2.78□□□□□ -1.96
VAB2YEL005C ADH2P00331 348 aaKnown RBP2.77□□□□□ -1.97
VAB2YEL005C MSI1P13712 422 aa2.77□□□□□ -1.97
VAB2YEL005C DPH5P32469 300 aaPredicted RBP2.77□□□□□ -1.97
VAB2YEL005C CSE2P33308 149 aa2.77□□□□□ -1.97
VAB2YEL005C MCR1P36060 302 aaKnown RBP2.77□□□□□ -1.97
VAB2YEL005C ECM8P38246 354 aa2.77□□□□□ -1.97
VAB2YEL005C SDS24P38314 527 aa2.77□□□□□ -1.97
VAB2YEL005C GEP4P38812 185 aa2.77□□□□□ -1.97
VAB2YEL005C APE4P38821 490 aa2.77□□□□□ -1.97
VAB2YEL005C YNL208WP40159 199 aaKnown RBP2.77□□□□□ -1.97
VAB2YEL005C SNL1P40548 159 aa2.77□□□□□ -1.97
VAB2YEL005C YJR085CP47131 105 aaKnown RBP2.77□□□□□ -1.97
VAB2YEL005C SHE10P53075 577 aa2.77□□□□□ -1.97
VAB2YEL005C MPS2P53159 387 aa2.77□□□□□ -1.97
VAB2YEL005C SHY1P53266 389 aa2.77□□□□□ -1.97
VAB2YEL005C YPL107WQ02873 248 aa2.77□□□□□ -1.97
VAB2YEL005C SMF3Q12078 473 aaPredicted RBP2.77□□□□□ -1.97
VAB2YEL005C IZH2Q12442 317 aa2.77□□□□□ -1.97
VAB2YEL005C PCL9Q12477 304 aa2.77□□□□□ -1.97
VAB2YEL005C YCR024C-BQ3E7Z8 88 aa2.77□□□□□ -1.97
VAB2YEL005C RPB5P20434 215 aa2.76□□□□□ -1.97
VAB2YEL005C LDB16P25587 256 aa2.76□□□□□ -1.97
VAB2YEL005C YOX1P34161 385 aa2.76□□□□□ -1.97
VAB2YEL005C SWD3P38123 315 aa2.76□□□□□ -1.97
VAB2YEL005C AIM10P39965 576 aaKnown RBP2.76□□□□□ -1.97
VAB2YEL005C CLD1P53264 445 aa2.76□□□□□ -1.97
VAB2YEL005C LIP2Q06005 328 aa2.76□□□□□ -1.97
VAB2YEL005C CMS1Q07897 291 aaKnown RBP2.76□□□□□ -1.97
VAB2YEL005C PEX27Q08580 376 aa2.76□□□□□ -1.97
VAB2YEL005C HMS1Q12398 434 aa2.76□□□□□ -1.97
VAB2YEL005C SKS1Q12505 502 aa2.76□□□□□ -1.97
VAB2YEL005C MEX67Q99257 599 aaKnown RBP2.76□□□□□ -1.97
VAB2YEL005C SSC1P0CS90 654 aaKnown RBP2.75□□□□□ -1.97
VAB2YEL005C ISY1P21374 235 aaPredicted RBP2.75□□□□□ -1.97
VAB2YEL005C MRPL8P22353 238 aa2.75□□□□□ -1.97
VAB2YEL005C AAT2P23542 418 aaKnown RBP2.75□□□□□ -1.97
VAB2YEL005C RTC2P38279 296 aa2.75□□□□□ -1.97
VAB2YEL005C PRE5P40302 234 aaKnown RBP2.75□□□□□ -1.97
VAB2YEL005C DFG10P40526 253 aa2.75□□□□□ -1.97
VAB2YEL005C MST27P53176 234 aa2.75□□□□□ -1.97
VAB2YEL005C CWC22P53333 577 aaKnown RBP2.75□□□□□ -1.97
VAB2YEL005C TMC1Q08422 150 aaPredicted RBP2.75□□□□□ -1.97
VAB2YEL005C FDH1Q08911 376 aa2.75□□□□□ -1.97
VAB2YEL005C GLE1Q12315 538 aa2.75□□□□□ -1.97
VAB2YEL005C DPH2P32461 534 aa2.74□□□□□ -1.97
VAB2YEL005C YSW1P38280 609 aa2.74□□□□□ -1.97
VAB2YEL005C YHK8P38776 514 aa2.74□□□□□ -1.97
VAB2YEL005C SEC9P40357 651 aa2.74□□□□□ -1.97
VAB2YEL005C AIP1P46680 615 aaKnown RBP2.74□□□□□ -1.97
VAB2YEL005C PMT5P52867 743 aa2.74□□□□□ -1.97
VAB2YEL005C TDA1Q03533 586 aa2.74□□□□□ -1.97
VAB2YEL005C YPR091CQ06833 770 aa2.74□□□□□ -1.97
VAB2YEL005C RBD2Q12270 262 aa2.74□□□□□ -1.97
VAB2YEL005C RNA1P11745 407 aaKnown RBP2.73□□□□□ -1.97
VAB2YEL005C SCH9P11792 824 aaKnown RBP2.73□□□□□ -1.97
VAB2YEL005C TIR2P33890 251 aa2.73□□□□□ -1.97
VAB2YEL005C LAS1P36146 502 aaPredicted RBP2.73□□□□□ -1.97
VAB2YEL005C GPX2P38143 162 aa2.73□□□□□ -1.97
VAB2YEL005C SEC27P41811 889 aaKnown RBP2.73□□□□□ -1.97
VAB2YEL005C EGT2P42835 1041 aa2.73□□□□□ -1.97
VAB2YEL005C YGL039WP53183 348 aaKnown RBP2.73□□□□□ -1.97
VAB2YEL005C FCY22Q12119 530 aa2.73□□□□□ -1.97
VAB2YEL005C OPI1P21957 404 aa2.72□□□□□ -1.97
VAB2YEL005C UBA1P22515 1024 aaKnown RBP2.72□□□□□ -1.97
VAB2YEL005C PSO2P30620 661 aa2.72□□□□□ -1.97
VAB2YEL005C FAA1P30624 700 aaKnown RBP2.72□□□□□ -1.97
VAB2YEL005C MSK1P32048 576 aa2.72□□□□□ -1.97
VAB2YEL005C MIG3P39943 394 aa2.72□□□□□ -1.97
VAB2YEL005C OXA1P39952 402 aa2.72□□□□□ -1.97
VAB2YEL005C UTP18P40362 594 aaPredicted RBP2.72□□□□□ -1.97
VAB2YEL005C LYS12P40495 371 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms