RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A TOA1P32773 286 aa0.31□□□□□ -2.36
SDH6YDR379C-A SKG6P32900 734 aaPredicted RBP0.31□□□□□ -2.36
SDH6YDR379C-A DBP7P36120 742 aaKnown RBP0.31□□□□□ -2.36
SDH6YDR379C-A MMS4P38257 691 aa0.31□□□□□ -2.36
SDH6YDR379C-A SHE3P38272 425 aaKnown RBP0.31□□□□□ -2.36
SDH6YDR379C-A NOP16P40007 231 aaKnown RBP0.31□□□□□ -2.36
SDH6YDR379C-A RRT13P40042 185 aa0.31□□□□□ -2.36
SDH6YDR379C-A UFE1P41834 346 aa0.31□□□□□ -2.36
SDH6YDR379C-A KEG1P43614 200 aa0.31□□□□□ -2.36
SDH6YDR379C-A TOS3P43637 560 aa0.31□□□□□ -2.36
SDH6YDR379C-A BAT2P47176 376 aaKnown RBP0.31□□□□□ -2.36
SDH6YDR379C-A YGL088WP53151 121 aa0.31□□□□□ -2.36
SDH6YDR379C-A RRP46P53256 223 aaPredicted RBP0.31□□□□□ -2.36
SDH6YDR379C-A VAC7P53950 1165 aa0.31□□□□□ -2.36
SDH6YDR379C-A PRP38Q00723 242 aaPredicted RBP0.31□□□□□ -2.36
SDH6YDR379C-A YMR155WQ03795 547 aa0.31□□□□□ -2.36
SDH6YDR379C-A YDR115WQ04598 105 aa0.31□□□□□ -2.36
SDH6YDR379C-A MSC3Q05812 728 aa0.31□□□□□ -2.36
SDH6YDR379C-A YHC1Q05900 231 aaKnown RBP0.31□□□□□ -2.36
SDH6YDR379C-A YLR177WQ06251 628 aa0.31□□□□□ -2.36
SDH6YDR379C-A SRO7Q12038 1033 aa0.31□□□□□ -2.36
SDH6YDR379C-A FRE8Q12209 686 aa0.31□□□□□ -2.36
SDH6YDR379C-A SFM1Q12314 213 aa0.31□□□□□ -2.36
SDH6YDR379C-A NCA2Q12374 616 aa0.31□□□□□ -2.36
SDH6YDR379C-A IMA3P0CW40 589 aa0.3□□□□□ -2.36
SDH6YDR379C-A IMA4P0CW41 589 aa0.3□□□□□ -2.36
SDH6YDR379C-A RPS23AP0CX29 145 aaKnown RBP0.3□□□□□ -2.36
SDH6YDR379C-A RPS23BP0CX30 145 aa0.3□□□□□ -2.36
SDH6YDR379C-A MET8P15807 274 aa0.3□□□□□ -2.36
SDH6YDR379C-A PPH22P23595 377 aa0.3□□□□□ -2.36
SDH6YDR379C-A HXT3P32466 567 aaKnown RBP0.3□□□□□ -2.36
SDH6YDR379C-A SPS19P32573 292 aaKnown RBP0.3□□□□□ -2.36
SDH6YDR379C-A VPS24P36095 224 aaKnown RBP0.3□□□□□ -2.36
SDH6YDR379C-A YBL081WP38180 368 aaKnown RBP0.3□□□□□ -2.36
SDH6YDR379C-A RRN10P38204 145 aa0.3□□□□□ -2.36
SDH6YDR379C-A WSC4P38739 605 aa0.3□□□□□ -2.36
SDH6YDR379C-A MET18P40469 1032 aa0.3□□□□□ -2.36
SDH6YDR379C-A TRF5P48561 642 aaKnown RBP0.3□□□□□ -2.36
SDH6YDR379C-A ASN2P49090 572 aaKnown RBP0.3□□□□□ -2.36
SDH6YDR379C-A JJJ1P53863 590 aa0.3□□□□□ -2.36
SDH6YDR379C-A RNH201P53942 307 aa0.3□□□□□ -2.36
SDH6YDR379C-A STD1Q02794 444 aa0.3□□□□□ -2.36
SDH6YDR379C-A MIX17Q03667 156 aa0.3□□□□□ -2.36
SDH6YDR379C-A VTA1Q06263 330 aa0.3□□□□□ -2.36
SDH6YDR379C-A CDD1Q06549 142 aa0.3□□□□□ -2.36
SDH6YDR379C-A ASA1Q06822 443 aa0.3□□□□□ -2.36
SDH6YDR379C-A IMA2Q08295 589 aa0.3□□□□□ -2.36
SDH6YDR379C-A BUG1Q12191 341 aa0.3□□□□□ -2.36
SDH6YDR379C-A HIF1Q12373 385 aa0.3□□□□□ -2.36
SDH6YDR379C-A HMS1Q12398 434 aa0.3□□□□□ -2.36
SDH6YDR379C-A YAL067W-AQ8TGK6 75 aa0.3□□□□□ -2.36
SDH6YDR379C-A POM152P39685 1337 aa0.3□□□□□ -2.36
SDH6YDR379C-A PAB1P04147 577 aaKnown RBP RIP-Chip data0.29□□□□□ -2.36 RIP-Chip
SDH6YDR379C-A ADH3P07246 375 aaKnown RBP0.29□□□□□ -2.36
SDH6YDR379C-A ATP1P07251 545 aaKnown RBP0.29□□□□□ -2.36
SDH6YDR379C-A CUP2P15315 225 aa0.29□□□□□ -2.36
SDH6YDR379C-A AAC3P18238 307 aa0.29□□□□□ -2.36
SDH6YDR379C-A CLB1P24868 471 aa0.29□□□□□ -2.36
SDH6YDR379C-A PWP2P25635 923 aaKnown RBP0.29□□□□□ -2.36
SDH6YDR379C-A MIG1P27705 504 aa0.29□□□□□ -2.36
SDH6YDR379C-A GPI10P30777 616 aa0.29□□□□□ -2.36
SDH6YDR379C-A MCM10P32354 571 aa0.29□□□□□ -2.36
SDH6YDR379C-A SPO23P33757 523 aa0.29□□□□□ -2.36
SDH6YDR379C-A OTU2P38747 307 aaKnown RBP0.29□□□□□ -2.36
SDH6YDR379C-A ECM14P38836 430 aa0.29□□□□□ -2.36
SDH6YDR379C-A VHS2P40463 436 aa0.29□□□□□ -2.36
SDH6YDR379C-A HSH155P49955 971 aaKnown RBP0.29□□□□□ -2.36
SDH6YDR379C-A REX2P54964 269 aaKnown RBP0.29□□□□□ -2.36
SDH6YDR379C-A SED5Q01590 340 aa0.29□□□□□ -2.36
SDH6YDR379C-A MMT1Q03218 510 aa0.29□□□□□ -2.36
SDH6YDR379C-A SNT309Q06091 175 aaPredicted RBP0.29□□□□□ -2.36
SDH6YDR379C-A COG4Q06096 861 aa0.29□□□□□ -2.36
SDH6YDR379C-A SIL1Q08199 421 aa0.29□□□□□ -2.36
SDH6YDR379C-A YOR376WQ08900 122 aa0.29□□□□□ -2.36
SDH6YDR379C-A VAM3Q12241 283 aa0.29□□□□□ -2.36
SDH6YDR379C-A PCL9Q12477 304 aa0.29□□□□□ -2.36
SDH6YDR379C-A ADE4P04046 510 aaKnown RBP0.28□□□□□ -2.36
SDH6YDR379C-A SSC1P0CS90 654 aaKnown RBP0.28□□□□□ -2.36
SDH6YDR379C-A RPS18AP0CX55 146 aaKnown RBP0.28□□□□□ -2.36
SDH6YDR379C-A RPS18BP0CX56 146 aaPredicted RBP0.28□□□□□ -2.36
SDH6YDR379C-A UNG1P12887 359 aa0.28□□□□□ -2.36
SDH6YDR379C-A RPL3P14126 387 aaKnown RBP0.28□□□□□ -2.36
SDH6YDR379C-A HPR1P17629 752 aaKnown RBP0.28□□□□□ -2.36
SDH6YDR379C-A CLC1P17891 233 aa0.28□□□□□ -2.36
SDH6YDR379C-A CHA1P25379 360 aaKnown RBP0.28□□□□□ -2.36
SDH6YDR379C-A LDS1P31379 325 aa0.28□□□□□ -2.36
SDH6YDR379C-A ANP1P32629 500 aa0.28□□□□□ -2.36
SDH6YDR379C-A YKR032WP36127 104 aa0.28□□□□□ -2.36
SDH6YDR379C-A YBR241CP38142 488 aa0.28□□□□□ -2.36
SDH6YDR379C-A SHE1P38200 338 aa0.28□□□□□ -2.36
SDH6YDR379C-A ECM8P38246 354 aa0.28□□□□□ -2.36
SDH6YDR379C-A BDH1P39714 382 aa0.28□□□□□ -2.36
SDH6YDR379C-A HEM14P40012 539 aa0.28□□□□□ -2.36
SDH6YDR379C-A SPO22P40511 975 aa0.28□□□□□ -2.36
SDH6YDR379C-A CTK3P46963 296 aaPredicted RBP0.28□□□□□ -2.36
SDH6YDR379C-A COS5P47187 383 aa0.28□□□□□ -2.36
SDH6YDR379C-A MNP1P53163 194 aaPredicted RBP0.28□□□□□ -2.36
SDH6YDR379C-A YGR015CP53208 328 aa0.28□□□□□ -2.36
SDH6YDR379C-A YGR117CP53270 476 aa0.28□□□□□ -2.36
SDH6YDR379C-A PRM1P53835 661 aa0.28□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms