RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W ARF3P40994 183 aaRIP-Chip data4.01□□□□□ -1.77 RIP-Chip
TRS85YDR108W GPP1P41277 250 aaKnown RBP4.01□□□□□ -1.77
TRS85YDR108W ASG7P46993 209 aa4.01□□□□□ -1.77
TRS85YDR108W RPA34P47006 233 aaPredicted RBP4.01□□□□□ -1.77
TRS85YDR108W LOH1P47055 219 aa4.01□□□□□ -1.77
TRS85YDR108W YDL183CP48569 320 aa4.01□□□□□ -1.77
TRS85YDR108W RTA1P53047 317 aa4.01□□□□□ -1.77
TRS85YDR108W YGR012WP53206 393 aa4.01□□□□□ -1.77
TRS85YDR108W SLM2P53955 656 aa4.01□□□□□ -1.77
TRS85YDR108W HDA1P53973 706 aa4.01□□□□□ -1.77
TRS85YDR108W MAK3Q03503 176 aa4.01□□□□□ -1.77
TRS85YDR108W TDA1Q03533 586 aa4.01□□□□□ -1.77
TRS85YDR108W PUN1Q06991 263 aa4.01□□□□□ -1.77
TRS85YDR108W HFI1Q12060 488 aa4.01□□□□□ -1.77
TRS85YDR108W SPE1P08432 466 aa4□□□□□ -1.77
TRS85YDR108W SSA3P09435 649 aaKnown RBP4□□□□□ -1.77
TRS85YDR108W DAT1P13483 248 aaKnown RBP4□□□□□ -1.77
TRS85YDR108W RNA14P25298 677 aaKnown RBP4□□□□□ -1.77
TRS85YDR108W RRP7P25368 297 aaPredicted RBP4□□□□□ -1.77
TRS85YDR108W NAB2P32505 525 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
TRS85YDR108W TCA17P32613 152 aa4□□□□□ -1.77
TRS85YDR108W TSA1P34760 196 aaKnown RBP4□□□□□ -1.77
TRS85YDR108W NOP4P37838 685 aaKnown RBP4□□□□□ -1.77
TRS85YDR108W PPE1P38796 400 aa4□□□□□ -1.77
TRS85YDR108W GEP4P38812 185 aa4□□□□□ -1.77
TRS85YDR108W PEP8P40335 379 aa4□□□□□ -1.77
TRS85YDR108W PGD1P40356 397 aa4□□□□□ -1.77
TRS85YDR108W LAS21P40367 830 aa4□□□□□ -1.77
TRS85YDR108W ATM1P40416 690 aa4□□□□□ -1.77
TRS85YDR108W YGR201CP42936 225 aa4□□□□□ -1.77
TRS85YDR108W RGD2P43556 714 aa4□□□□□ -1.77
TRS85YDR108W SIP4P46954 829 aa4□□□□□ -1.77
TRS85YDR108W MRX6P48564 524 aa4□□□□□ -1.77
TRS85YDR108W SLX9P53251 210 aaPredicted RBP4□□□□□ -1.77
TRS85YDR108W YNL095CP53932 642 aa4□□□□□ -1.77
TRS85YDR108W YNL033WP53964 284 aa4□□□□□ -1.77
TRS85YDR108W YNL019CP53975 284 aa4□□□□□ -1.77
TRS85YDR108W MRPS16Q02608 121 aa4□□□□□ -1.77
TRS85YDR108W HSP31Q04432 237 aa4□□□□□ -1.77
TRS85YDR108W TFC6Q06339 672 aa4□□□□□ -1.77
TRS85YDR108W PHO92Q06390 306 aa4□□□□□ -1.77
TRS85YDR108W TPO1Q07824 586 aa4□□□□□ -1.77
TRS85YDR108W YPL199CQ08954 240 aa4□□□□□ -1.77
TRS85YDR108W APC9Q12107 265 aa4□□□□□ -1.77
TRS85YDR108W NMD4Q12129 218 aa4□□□□□ -1.77
TRS85YDR108W PKH2Q12236 1081 aaKnown RBP4□□□□□ -1.77
TRS85YDR108W YLR108CQ12259 485 aa4□□□□□ -1.77
TRS85YDR108W PCD1Q12524 340 aa4□□□□□ -1.77
TRS85YDR108W RGS2Q99188 309 aa4□□□□□ -1.77
TRS85YDR108W CAR1P00812 333 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W STF1P01098 86 aa3.99□□□□□ -1.77
TRS85YDR108W GAL80P04387 435 aa3.99□□□□□ -1.77
TRS85YDR108W RPP2AP05319 106 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W SAT4P25333 603 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W PPZ1P26570 692 aa3.99□□□□□ -1.77
TRS85YDR108W LAC1P28496 418 aa3.99□□□□□ -1.77
TRS85YDR108W PRO3P32263 286 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W YBR241CP38142 488 aa3.99□□□□□ -1.77
TRS85YDR108W YBR013CP38215 129 aa3.99□□□□□ -1.77
TRS85YDR108W PRS3P38689 320 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W SOP4P39543 234 aaPredicted RBP3.99□□□□□ -1.77
TRS85YDR108W ACS2P52910 683 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W NSA1P53136 463 aaPredicted RBP3.99□□□□□ -1.77
TRS85YDR108W SSU72P53538 206 aaPredicted RBP3.99□□□□□ -1.77
TRS85YDR108W GRX5Q02784 150 aa3.99□□□□□ -1.77
TRS85YDR108W MRPS17Q03246 237 aaPredicted RBP3.99□□□□□ -1.77
TRS85YDR108W NHX1Q04121 633 aa3.99□□□□□ -1.77
TRS85YDR108W GIM5Q04493 163 aa3.99□□□□□ -1.77
TRS85YDR108W SEN15Q04675 128 aa3.99□□□□□ -1.77
TRS85YDR108W YPR147CQ06522 304 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W PML1Q07930 204 aaPredicted RBP3.99□□□□□ -1.77
TRS85YDR108W RRP40Q08285 240 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W YOR365CQ08844 703 aa3.99□□□□□ -1.77
TRS85YDR108W CYT1P07143 309 aa3.99□□□□□ -1.77
TRS85YDR108W FUM1P08417 488 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W DCC1P25559 380 aa3.99□□□□□ -1.77
TRS85YDR108W AHC2P25649 128 aa3.99□□□□□ -1.77
TRS85YDR108W CSM1P25651 190 aa3.99□□□□□ -1.77
TRS85YDR108W SRY1P36007 326 aa3.99□□□□□ -1.77
TRS85YDR108W SNU114P36048 1008 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W YKR075CP36155 307 aa3.99□□□□□ -1.77
TRS85YDR108W MRPL36P36531 177 aa3.99□□□□□ -1.77
TRS85YDR108W AHP1P38013 176 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W EXO5P38289 585 aa3.99□□□□□ -1.77
TRS85YDR108W CYC2P38909 366 aa3.99□□□□□ -1.77
TRS85YDR108W PCL6P40038 420 aa3.99□□□□□ -1.77
TRS85YDR108W VRG4P40107 337 aa3.99□□□□□ -1.77
TRS85YDR108W YMR144WP40214 342 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W SKP2P42843 763 aa3.99□□□□□ -1.77
TRS85YDR108W CIT3P43635 486 aa3.99□□□□□ -1.77
TRS85YDR108W YML6P51998 286 aa3.99□□□□□ -1.77
TRS85YDR108W TYW3P53177 273 aa3.99□□□□□ -1.77
TRS85YDR108W RPT4P53549 437 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W NUP49Q02199 472 aa3.99□□□□□ -1.77
TRS85YDR108W ECM9Q02202 377 aa3.99□□□□□ -1.77
TRS85YDR108W SMA1Q02651 245 aa3.99□□□□□ -1.77
TRS85YDR108W RMT2Q03305 412 aa3.99□□□□□ -1.77
TRS85YDR108W PPN1Q04119 674 aa3.99□□□□□ -1.77
TRS85YDR108W HOF1Q05080 669 aa3.99□□□□□ -1.77
TRS85YDR108W YHC1Q05900 231 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms