RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W DYN1P36022 4092 aa2.36□□□□□ -2.03
VPS41YDR080W HXT1P32465 570 aa2.35□□□□□ -2.03
VPS41YDR080W NRP1P32770 719 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
VPS41YDR080W ARC40P38328 384 aaKnown RBP2.35□□□□□ -2.03
VPS41YDR080W LNP1P38878 278 aa2.35□□□□□ -2.03
VPS41YDR080W MDV1P47025 714 aa2.35□□□□□ -2.03
VPS41YDR080W YJR149WP47177 404 aa2.35□□□□□ -2.03
VPS41YDR080W TMA16Q08687 178 aa2.35□□□□□ -2.03
VPS41YDR080W IMA3P0CW40 589 aa2.35□□□□□ -2.03
VPS41YDR080W IMA4P0CW41 589 aa2.35□□□□□ -2.03
VPS41YDR080W PHO13P19881 312 aa2.35□□□□□ -2.03
VPS41YDR080W HIS2P38635 335 aa2.35□□□□□ -2.03
VPS41YDR080W VPS52P39904 641 aa2.35□□□□□ -2.03
VPS41YDR080W CAB2P40506 365 aa2.35□□□□□ -2.03
VPS41YDR080W ERR3P42222 437 aa2.35□□□□□ -2.03
VPS41YDR080W YGR015CP53208 328 aa2.35□□□□□ -2.03
VPS41YDR080W PDR16P53860 351 aaKnown RBP2.35□□□□□ -2.03
VPS41YDR080W NUP116Q02630 1113 aa2.35□□□□□ -2.03
VPS41YDR080W YLR287CQ05881 355 aa2.35□□□□□ -2.03
VPS41YDR080W IMA2Q08295 589 aa2.35□□□□□ -2.03
VPS41YDR080W TMA7Q3E764 64 aaKnown RBP2.35□□□□□ -2.03
VPS41YDR080W YKL100CP34248 587 aa2.34□□□□□ -2.03
VPS41YDR080W SNU114P36048 1008 aaKnown RBP2.34□□□□□ -2.03
VPS41YDR080W YND1P40009 630 aa2.34□□□□□ -2.03
VPS41YDR080W MDM34P53083 459 aa2.34□□□□□ -2.03
VPS41YDR080W LSC1P53598 329 aaKnown RBP2.34□□□□□ -2.03
VPS41YDR080W YLR112WQ12130 139 aa2.34□□□□□ -2.03
VPS41YDR080W FLO9P39712 1322 aa2.34□□□□□ -2.03
VPS41YDR080W QCR6P00127 147 aa2.34□□□□□ -2.03
VPS41YDR080W ATP11P32453 318 aa2.34□□□□□ -2.03
VPS41YDR080W SIP1P32578 815 aa2.34□□□□□ -2.03
VPS41YDR080W ASC1P38011 319 aaKnown RBP2.34□□□□□ -2.03
VPS41YDR080W PHM8P40025 321 aa2.34□□□□□ -2.03
VPS41YDR080W UTP18P40362 594 aaPredicted RBP2.34□□□□□ -2.03
VPS41YDR080W PKP1P40530 394 aa2.34□□□□□ -2.03
VPS41YDR080W GCD14P46959 383 aaPredicted RBP2.34□□□□□ -2.03
VPS41YDR080W YML6P51998 286 aa2.34□□□□□ -2.03
VPS41YDR080W MLC2Q06580 163 aa2.34□□□□□ -2.03
VPS41YDR080W VAM6Q07468 1049 aa2.34□□□□□ -2.03
VPS41YDR080W NOP6Q07623 225 aaKnown RBP2.34□□□□□ -2.03
VPS41YDR080W GSH2Q08220 491 aa2.34□□□□□ -2.03
VPS41YDR080W ILV2P07342 687 aaKnown RBP2.34□□□□□ -2.04
VPS41YDR080W GUK1P15454 187 aaKnown RBP2.34□□□□□ -2.04
VPS41YDR080W SRB4P32569 687 aa2.34□□□□□ -2.04
VPS41YDR080W RPS27AP35997 82 aaKnown RBP2.34□□□□□ -2.04
VPS41YDR080W KKQ8P36004 724 aa2.34□□□□□ -2.04
VPS41YDR080W PCH2P38126 564 aa2.34□□□□□ -2.04
VPS41YDR080W RRT2P38332 387 aa2.34□□□□□ -2.04
VPS41YDR080W RPS27BP38711 82 aa2.34□□□□□ -2.04
VPS41YDR080W HAT2P39984 401 aa2.34□□□□□ -2.04
VPS41YDR080W YER034WP40022 185 aaKnown RBP2.34□□□□□ -2.04
VPS41YDR080W MAL12P53341 584 aa2.34□□□□□ -2.04
VPS41YDR080W ARC35P53731 342 aaKnown RBP2.34□□□□□ -2.04
VPS41YDR080W RPL22BP56628 122 aaKnown RBP2.34□□□□□ -2.04
VPS41YDR080W RPN9Q04062 393 aaKnown RBP2.34□□□□□ -2.04
VPS41YDR080W PDR8Q06149 701 aa2.34□□□□□ -2.04
VPS41YDR080W YPR022CQ12139 1133 aa2.34□□□□□ -2.04
VPS41YDR080W YOS9Q99220 542 aa2.34□□□□□ -2.04
VPS41YDR080W STE3P06783 470 aa2.33□□□□□ -2.04
VPS41YDR080W RAD10P06838 210 aa2.33□□□□□ -2.04
VPS41YDR080W PET122P10355 254 aa2.33□□□□□ -2.04
VPS41YDR080W ERG8P24521 451 aa2.33□□□□□ -2.04
VPS41YDR080W CNS1P33313 385 aa2.33□□□□□ -2.04
VPS41YDR080W RRP1P35178 278 aaPredicted RBP2.33□□□□□ -2.04
VPS41YDR080W RRN10P38204 145 aa2.33□□□□□ -2.04
VPS41YDR080W IFA38P38286 347 aa2.33□□□□□ -2.04
VPS41YDR080W YMR262WP38430 313 aa2.33□□□□□ -2.04
VPS41YDR080W SMF2P38778 549 aa2.33□□□□□ -2.04
VPS41YDR080W YMR144WP40214 342 aaKnown RBP2.33□□□□□ -2.04
VPS41YDR080W SEC27P41811 889 aaKnown RBP2.33□□□□□ -2.04
VPS41YDR080W MNN5P46982 586 aa2.33□□□□□ -2.04
VPS41YDR080W ASI1P54074 624 aa2.33□□□□□ -2.04
VPS41YDR080W DIG1Q03063 452 aaKnown RBP2.33□□□□□ -2.04
VPS41YDR080W FAR10Q06001 478 aa2.33□□□□□ -2.04
VPS41YDR080W MGR1P25573 417 aa2.33□□□□□ -2.04
VPS41YDR080W LHS1P36016 881 aa2.33□□□□□ -2.04
VPS41YDR080W DOA1P36037 715 aa2.33□□□□□ -2.04
VPS41YDR080W YDR089WP38966 869 aa2.33□□□□□ -2.04
VPS41YDR080W SCC4P40090 624 aa2.33□□□□□ -2.04
VPS41YDR080W HXT9P40885 567 aa2.33□□□□□ -2.04
VPS41YDR080W MCH4Q08268 501 aa2.33□□□□□ -2.04
VPS41YDR080W MDM32Q12171 622 aa2.33□□□□□ -2.04
VPS41YDR080W UBX3Q12229 455 aa2.33□□□□□ -2.04
VPS41YDR080W RPL15AP05748 204 aaKnown RBP2.32□□□□□ -2.04
VPS41YDR080W PET111P08468 800 aa2.32□□□□□ -2.04
VPS41YDR080W STP22P25604 385 aa2.32□□□□□ -2.04
VPS41YDR080W RIM1P32445 135 aaKnown RBP2.32□□□□□ -2.04
VPS41YDR080W SEC28P40509 296 aaKnown RBP2.32□□□□□ -2.04
VPS41YDR080W SWP82P43554 623 aa2.32□□□□□ -2.04
VPS41YDR080W YPL108WQ02872 168 aaPredicted RBP2.32□□□□□ -2.04
VPS41YDR080W GAS2Q06135 555 aa2.32□□□□□ -2.04
VPS41YDR080W YOL159CQ08300 171 aa2.32□□□□□ -2.04
VPS41YDR080W SLD7Q08457 257 aa2.32□□□□□ -2.04
VPS41YDR080W MEC1P38111 2368 aa2.32□□□□□ -2.04
VPS41YDR080W STE50P25344 346 aa2.32□□□□□ -2.04
VPS41YDR080W MNN2P38069 597 aa2.32□□□□□ -2.04
VPS41YDR080W HOS2P53096 452 aaPredicted RBP2.32□□□□□ -2.04
VPS41YDR080W ERG26P53199 349 aaKnown RBP2.32□□□□□ -2.04
VPS41YDR080W BOP3P53958 396 aa2.32□□□□□ -2.04
VPS41YDR080W NUS1Q12063 375 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms