RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	STP2	P38704	541 aa		5.14	□□□□□ -1.59
SIR2	YDL042C	MLH1	P38920	769 aa		5.14	□□□□□ -1.59
SIR2	YDL042C	YDR541C	Q03049	344 aa		5.14	□□□□□ -1.59
SIR2	YDL042C	SMA2	Q04658	369 aa		5.14	□□□□□ -1.59
SIR2	YDL042C	TPT1	Q12272	230 aa	Known RBP	5.14	□□□□□ -1.59
SIR2	YDL042C	VPH1	P32563	840 aa	Known RBP	5.13	□□□□□ -1.59
SIR2	YDL042C	MUD1	P32605	298 aa	Known RBP	5.13	□□□□□ -1.59
SIR2	YDL042C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
SIR2	YDL042C	CCT4	P39078	528 aa	Known RBP	5.13	□□□□□ -1.59
SIR2	YDL042C	BOR1	P53838	576 aa		5.13	□□□□□ -1.59
SIR2	YDL042C	MEH1	Q02205	184 aa		5.13	□□□□□ -1.59
SIR2	YDL042C	BCH1	Q05029	724 aa		5.13	□□□□□ -1.59
SIR2	YDL042C	QDR3	P38227	689 aa		5.12	□□□□□ -1.59
SIR2	YDL042C	CHS6	P40955	746 aa		5.12	□□□□□ -1.59
SIR2	YDL042C	SFH5	P47008	294 aa		5.12	□□□□□ -1.59
SIR2	YDL042C	MDG1	P53885	366 aa		5.12	□□□□□ -1.59
SIR2	YDL042C	EOS1	P53938	366 aa		5.12	□□□□□ -1.59
SIR2	YDL042C	FRE6	Q12473	712 aa		5.12	□□□□□ -1.59
SIR2	YDL042C	SKS1	Q12505	502 aa		5.12	□□□□□ -1.59
SIR2	YDL042C	RPL6B	P05739	176 aa	Known RBP	5.12	□□□□□ -1.59
SIR2	YDL042C	YSC83	P32792	385 aa		5.12	□□□□□ -1.59
SIR2	YDL042C	SDH3	P33421	198 aa		5.12	□□□□□ -1.59
SIR2	YDL042C	ATP3	P38077	311 aa	Known RBP	5.12	□□□□□ -1.59
SIR2	YDL042C	WSS1	P38838	269 aa		5.12	□□□□□ -1.59
SIR2	YDL042C	RPL6A	Q02326	176 aa	Known RBP	5.12	□□□□□ -1.59
SIR2	YDL042C	YPL107W	Q02873	248 aa		5.12	□□□□□ -1.59
SIR2	YDL042C	PBA1	Q05778	276 aa		5.12	□□□□□ -1.59
SIR2	YDL042C	SKN1	P33336	771 aa		5.11	□□□□□ -1.59
SIR2	YDL042C	PRM5	P40476	318 aa		5.11	□□□□□ -1.59
SIR2	YDL042C	PAC11	P40960	533 aa		5.11	□□□□□ -1.59
SIR2	YDL042C	TOF1	P53840	1238 aa		5.11	□□□□□ -1.59
SIR2	YDL042C	TSR1	Q07381	788 aa	Known RBP	5.11	□□□□□ -1.59
SIR2	YDL042C	YDR061W	Q12298	539 aa		5.11	□□□□□ -1.59
SIR2	YDL042C	YBL059W	P34224	193 aa		5.1	□□□□□ -1.59
SIR2	YDL042C	MMF1	P40185	145 aa	Known RBP	5.1	□□□□□ -1.59
SIR2	YDL042C	EPL1	P43572	832 aa		5.1	□□□□□ -1.59
SIR2	YDL042C	OPI1	P21957	404 aa		5.09	□□□□□ -1.59
SIR2	YDL042C	YCL068C	P25593	260 aa		5.09	□□□□□ -1.59
SIR2	YDL042C	YKL097C	P34245	136 aa		5.09	□□□□□ -1.59
SIR2	YDL042C	RRP1	P35178	278 aa	Predicted RBP	5.09	□□□□□ -1.59
SIR2	YDL042C	MRPL4	P36517	319 aa		5.09	□□□□□ -1.59
SIR2	YDL042C	YBR139W	P38109	508 aa		5.09	□□□□□ -1.59
SIR2	YDL042C	NDT80	P38830	627 aa		5.09	□□□□□ -1.59
SIR2	YDL042C	MNL1	P38888	796 aa		5.09	□□□□□ -1.59
SIR2	YDL042C	JLP2	P40206	208 aa		5.09	□□□□□ -1.59
SIR2	YDL042C	YIP5	P53108	310 aa		5.09	□□□□□ -1.59
SIR2	YDL042C	ELP3	Q02908	557 aa	Known RBP	5.09	□□□□□ -1.59
SIR2	YDL042C	CCE1	Q03702	353 aa		5.09	□□□□□ -1.59
SIR2	YDL042C	SLM3	Q12093	417 aa		5.09	□□□□□ -1.59
SIR2	YDL042C	NCA2	Q12374	616 aa		5.09	□□□□□ -1.59
SIR2	YDL042C	RSF2	P46974	1380 aa		5.09	□□□□□ -1.59
SIR2	YDL042C	URB1	P34241	1764 aa	Known RBP	5.08	□□□□□ -1.6
SIR2	YDL042C	YIL177C	P40434	1758 aa		5.08	□□□□□ -1.6
SIR2	YDL042C	YJL225C	P40889	1758 aa		5.08	□□□□□ -1.6
SIR2	YDL042C	SPT15	P13393	240 aa	Known RBP	5.08	□□□□□ -1.6
SIR2	YDL042C	CBS2	P14905	389 aa		5.08	□□□□□ -1.6
SIR2	YDL042C	DEG1	P31115	442 aa	Known RBP	5.08	□□□□□ -1.6
SIR2	YDL042C	DAD2	P36162	133 aa		5.08	□□□□□ -1.6
SIR2	YDL042C	TOS3	P43637	560 aa		5.08	□□□□□ -1.6
SIR2	YDL042C	ASN2	P49090	572 aa	Known RBP	5.08	□□□□□ -1.6
SIR2	YDL042C	RAX1	Q08760	435 aa		5.08	□□□□□ -1.6
SIR2	YDL042C	YOR387C	Q08910	206 aa		5.08	□□□□□ -1.6
SIR2	YDL042C	ERV2	Q12284	196 aa		5.08	□□□□□ -1.6
SIR2	YDL042C	RNH203	Q12338	110 aa		5.08	□□□□□ -1.6
SIR2	YDL042C	HHF1	P02309	103 aa	Known RBP	5.08	□□□□□ -1.6
SIR2	YDL042C	RPS24A	P0CX31	135 aa	Known RBP	5.08	□□□□□ -1.6
SIR2	YDL042C	RPS24B	P0CX32	135 aa	Known RBP	5.08	□□□□□ -1.6
SIR2	YDL042C	CHK1	P38147	527 aa		5.08	□□□□□ -1.6
SIR2	YDL042C	KAP104	P38217	918 aa	Known RBP	5.08	□□□□□ -1.6
SIR2	YDL042C	YSW1	P38280	609 aa		5.08	□□□□□ -1.6
SIR2	YDL042C	SIM1	P40472	476 aa		5.08	□□□□□ -1.6
SIR2	YDL042C	ECM7	Q06200	448 aa		5.08	□□□□□ -1.6
SIR2	YDL042C	TRP1	P00912	224 aa		5.07	□□□□□ -1.6
SIR2	YDL042C	ATP1	P07251	545 aa	Known RBP	5.07	□□□□□ -1.6
SIR2	YDL042C	SLM5	P25345	492 aa	Known RBP	5.07	□□□□□ -1.6
SIR2	YDL042C	MSP1	P28737	362 aa		5.07	□□□□□ -1.6
SIR2	YDL042C	COX13	P32799	129 aa		5.07	□□□□□ -1.6
SIR2	YDL042C	GDT1	P38301	280 aa	Predicted RBP	5.07	□□□□□ -1.6
SIR2	YDL042C	HER2	Q03557	464 aa		5.07	□□□□□ -1.6
SIR2	YDL042C	YRM1	Q12340	786 aa		5.07	□□□□□ -1.6
SIR2	YDL042C	CEX1	Q12453	761 aa		5.07	□□□□□ -1.6
SIR2	YDL042C	SRN2	Q99176	213 aa		5.07	□□□□□ -1.6
SIR2	YDL042C	SPT7	P35177	1332 aa		5.07	□□□□□ -1.6
SIR2	YDL042C	YRF1-3	P0CX14	1859 aa		5.07	□□□□□ -1.6
SIR2	YDL042C	YRF1-7	P0CX15	1859 aa		5.07	□□□□□ -1.6
SIR2	YDL042C	YRF1-6	P53819	1859 aa		5.07	□□□□□ -1.6
SIR2	YDL042C	OPI3	P05375	206 aa		5.06	□□□□□ -1.6
SIR2	YDL042C	RPL12A	P0CX53	165 aa	Known RBP	5.06	□□□□□ -1.6
SIR2	YDL042C	RPL12B	P0CX54	165 aa		5.06	□□□□□ -1.6
SIR2	YDL042C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
SIR2	YDL042C	PTH1	P38876	190 aa	Known RBP	5.06	□□□□□ -1.6
SIR2	YDL042C	MTM1	P53320	366 aa		5.06	□□□□□ -1.6
SIR2	YDL042C	IPK1	Q06667	281 aa		5.06	□□□□□ -1.6
SIR2	YDL042C	SMF3	Q12078	473 aa	Predicted RBP	5.06	□□□□□ -1.6
SIR2	YDL042C	LAS1	P36146	502 aa	Predicted RBP	5.05	□□□□□ -1.6
SIR2	YDL042C	RTT102	P53330	157 aa		5.05	□□□□□ -1.6
SIR2	YDL042C	PRP3	Q03338	469 aa	Predicted RBP	5.05	□□□□□ -1.6
SIR2	YDL042C	URC2	Q04411	772 aa		5.05	□□□□□ -1.6
SIR2	YDL042C	YFH1	Q07540	174 aa		5.05	□□□□□ -1.6
SIR2	YDL042C	TLG2	Q08144	397 aa		5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms