RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 PDIA5Q14554 519 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 STK38Q15208 465 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 GRIK4Q16099 956 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 TPH2Q8IWU9 490 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 LMBR1Q8WVP7 490 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 BBXQ8WY36 941 aaPredicted RBP14.81□□□□□ -0.04
GTF3A-209ENST00000640289 TOX2Q96NM4 488 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 CLIC6Q96NY7 704 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 CTAGE1Q96RT6 745 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 SH2D3AQ9BRG2 576 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 SEZ6LQ9BYH1 1024 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 FBXO2Q9UK22 296 aaPredicted RBP14.81□□□□□ -0.04
GTF3A-209ENST00000640289 MROH7Q68CQ1 1323 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 A0A087WWV3 80 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 ZBTB39O15060 712 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 SPTLC2O15270 562 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 TLR3O15455 904 aaKnown RBP14.8□□□□□ -0.04
GTF3A-209ENST00000640289 TREHO43280 583 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 HBP1O60381 514 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 EVI5O60447 810 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 CYP2C9P11712 490 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 NCLP19338 710 aaKnown RBP14.8□□□□□ -0.04
GTF3A-209ENST00000640289 ADAM17P78536 824 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 ECM1Q16610 540 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 PTGISQ16647 500 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 MARCH8Q5T0T0 291 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 SH3RF1Q7Z6J0 888 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 CATSPER3Q86XQ3 398 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 ERMNQ8TAM6 284 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 SNX29Q8TEQ0 813 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 MMTAG2Q9BU76 263 aaKnown RBP14.8□□□□□ -0.04
GTF3A-209ENST00000640289 RAB34Q9BZG1 259 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 PDLIM7Q9NR12 457 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 CIZ1Q9ULV3 898 aaPredicted RBP14.8□□□□□ -0.04
GTF3A-209ENST00000640289 NRCAMQ92823 1304 aa14.8□□□□□ -0.04
GTF3A-209ENST00000640289 TRIM43BA6NCK2 446 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 DDX11L8A8MPP1 907 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 ZBTB42B2RXF5 422 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 YEATS4O95619 227 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 CLTBP09497 229 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 CCT6AP40227 531 aaKnown RBP14.79□□□□□ -0.04
GTF3A-209ENST00000640289 XKR3Q5GH77 459 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 SPECC1Q5M775 1068 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 HAUS3Q68CZ6 603 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 PLA2G4FQ68DD2 849 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 ATL3Q6DD88 541 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 ANO5Q75V66 913 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 C4orf19Q8IY42 314 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 NEK9Q8TD19 979 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 WNT8BQ93098 351 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 TRIM43Q96BQ3 446 aaPredicted RBP14.79□□□□□ -0.04
GTF3A-209ENST00000640289 FAM167AQ96KS9 214 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 POLR3CQ9BUI4 534 aaPredicted RBP14.79□□□□□ -0.04
GTF3A-209ENST00000640289 CSRNP2Q9H175 543 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 ZSWIM4Q9H7M6 989 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 PRDM5Q9NQX1 630 aaPredicted RBP14.79□□□□□ -0.04
GTF3A-209ENST00000640289 NRBP2Q9NSY0 501 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 SEPT9Q9UHD8 586 aaPredicted RBP14.79□□□□□ -0.04
GTF3A-209ENST00000640289 NOD1Q9Y239 953 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 ATP6V1DQ9Y5K8 247 aa14.79□□□□□ -0.04
GTF3A-209ENST00000640289 SRPRBQ9Y5M8 271 aaKnown RBP14.79□□□□□ -0.04
GTF3A-209ENST00000640289 DKC1O60832 514 aaKnown RBP eCLIP14.78□□□□□ -0.04
GTF3A-209ENST00000640289 SYN1P17600 705 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 RPA1P27694 616 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 YWHABP31946 246 aaKnown RBP14.78□□□□□ -0.04
GTF3A-209ENST00000640289 LONP1P36776 959 aaKnown RBP14.78□□□□□ -0.04
GTF3A-209ENST00000640289 NPEPPSP55786 919 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 KRT85P78386 507 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 MLLT1Q03111 559 aaPredicted RBP14.78□□□□□ -0.04
GTF3A-209ENST00000640289 MTERF2Q49AM1 385 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 ZNF484Q5JVG2 852 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 KRT79Q5XKE5 535 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 POTEGQ6S5H5 508 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 RUFY4Q6ZNE9 571 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 KRI1Q8N9T8 703 aaKnown RBP14.78□□□□□ -0.04
GTF3A-209ENST00000640289 ZNF579Q8NAF0 562 aaKnown RBP14.78□□□□□ -0.04
GTF3A-209ENST00000640289 PIGOQ8TEQ8 1089 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 DHX38Q92620 1227 aaKnown RBP14.78□□□□□ -0.04
GTF3A-209ENST00000640289 TUFT1Q9NNX1 390 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 TMEM39AQ9NV64 488 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 CHMP5Q9NZZ3 219 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 TUBE1Q9UJT0 475 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 CFAP45Q9UL16 551 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 ZMYND8Q9ULU4 1186 aaPredicted RBP14.78□□□□□ -0.04
GTF3A-209ENST00000640289 MORC2Q9Y6X9 1032 aaPredicted RBP14.78□□□□□ -0.04
GTF3A-209ENST00000640289 ALPK3Q96L96 1907 aa14.78□□□□□ -0.04
GTF3A-209ENST00000640289 UMODL1Q5DID0 1318 aa14.77□□□□□ -0.04
GTF3A-209ENST00000640289 MBLAC1A4D2B0 266 aaPredicted RBP14.77□□□□□ -0.05
GTF3A-209ENST00000640289 RRN3P2A6NIE6 340 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 RBAK-RBAKDNI3L0D1 243 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 PPP6R2O75170 966 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 LYPLA2O95372 231 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 GNAT1P11488 350 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 ITGB8P26012 769 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 ZRSR1Q15695 479 aaKnown RBP14.77□□□□□ -0.05
GTF3A-209ENST00000640289 MTHFD1LQ6UB35 978 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 USP49Q70CQ1 688 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 TNPO1Q92973 898 aaKnown RBP14.77□□□□□ -0.05
GTF3A-209ENST00000640289 AK8Q96MA6 479 aa14.77□□□□□ -0.05
GTF3A-209ENST00000640289 CEP89Q96ST8 783 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms