RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 IQCF3P0C7M6 154 aa18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 ZNF286BP0CG31 522 aa18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 ARP10275 920 aa18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 GCFC2P16383 781 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 KCNJ6P48051 423 aa18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 ZP2Q05996 745 aa18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 NR5A1Q13285 461 aa18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 CUL4AQ13619 759 aa18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 SAFBQ15424 915 aaKnown RBP eCLIP18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 INF2Q27J81 1249 aa18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 NEK8Q86SG6 692 aa18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 MBOAT7Q96N66 472 aa18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 NAP1L4Q99733 375 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 PKD2L1Q9P0L9 805 aa18.34■□□□□ 0.53
CACNA1A-229ENST00000636670 SCN5AQ14524 2016 aa18.33■□□□□ 0.53
CACNA1A-229ENST00000636670 EMSYQ7Z589 1322 aa18.33■□□□□ 0.53
CACNA1A-229ENST00000636670 CYP3A7-CYP3A51PA0A087WV96 503 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 EDIL3O43854 480 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 GFRA3O60609 400 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 LGALS2P05162 132 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 CYP3A7P24462 503 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 ERVK-21P61565 698 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 PTPN11Q06124 597 aaPredicted RBP18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 ITGB3BPQ13352 177 aaPredicted RBP18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 Q4G0T1 1027 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 PRR16Q569H4 304 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 NFRKBQ6P4R8 1299 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 PIK3AP1Q6ZUJ8 805 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 RETREG2Q8NC44 543 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 FBXO18Q8NFZ0 1043 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 KAT2BQ92831 832 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 TGS1Q96RS0 853 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 ZBED2Q9BTP6 218 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 BCAS3Q9H6U6 928 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 SLC9A2Q9UBY0 812 aa18.33■□□□□ 0.52
CACNA1A-229ENST00000636670 K7ELQ4 463 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 HAS3O00219 553 aa18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 IPO5O00410 1097 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 PITPNM1O00562 1244 aa18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 TDP2O95551 362 aa18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 SP4Q02446 784 aa18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 SESTD1Q86VW0 696 aa18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 SNX21Q969T3 373 aa18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 ZNF577Q9BSK1 485 aa18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 TBC1D22BQ9NU19 505 aa18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 TCEAL9Q9UHQ7 104 aa18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 ZNF215Q9UL58 517 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 MTUS1Q9ULD2 1270 aa18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 SMC3Q9UQE7 1217 aa18.32■□□□□ 0.52
CACNA1A-229ENST00000636670 ARID2Q68CP9 1835 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 BTBD18B2RXH4 712 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 H3BQ06 376 aaPredicted RBP18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 GJB2P29033 226 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 TCF7P36402 384 aaPredicted RBP18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 PSEN2P49810 448 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 GUCY1B3Q02153 619 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 MFSD10Q14728 455 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 LETM2Q2VYF4 491 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 NBPF20Q3BBV1 942 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 EARS2Q5JPH6 523 aaKnown RBP18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 PPP4R3AQ6IN85 833 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 BMP8AQ7Z5Y6 402 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 ADHFE1Q8IWW8 467 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 SEPT1Q8WYJ6 367 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 C16orf70Q9BSU1 422 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 FOXP1Q9H334 677 aaPredicted RBP18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 CFAP54Q96N23 3096 aa18.31■□□□□ 0.52
CACNA1A-229ENST00000636670 FAM205CA6NFA0 338 aa18.3■□□□□ 0.52
CACNA1A-229ENST00000636670 IRS1P35568 1242 aa18.3■□□□□ 0.52
CACNA1A-229ENST00000636670 KIAA0753Q2KHM9 967 aa18.3■□□□□ 0.52
CACNA1A-229ENST00000636670 IER5LQ5T953 404 aa18.3■□□□□ 0.52
CACNA1A-229ENST00000636670 DDX25Q9UHL0 483 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-229ENST00000636670 SPTBN4Q9H254 2564 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 SIP14410 1827 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 GSTTP1A0A1W2PQM5 241 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 H3BRB1 525 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 MSH4O15457 936 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 DHX15O43143 795 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 LGR5O75473 907 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 ACTR2P61160 394 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 KRT76Q01546 638 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 TCF15Q12870 199 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 HERC4Q5GLZ8 1057 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 FAM47CQ5HY64 1035 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 ZNF746Q6NUN9 644 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 TRIM50Q86XT4 487 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 HSCBQ8IWL3 235 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 SMAP1Q8IYB5 467 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 SLC5A5Q92911 643 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 RIT2Q99578 217 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 RAD9AQ99638 391 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 TUT1Q9H6E5 874 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 TELO2Q9Y4R8 837 aa18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 ZFHX2Q9C0A1 2572 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-229ENST00000636670 DDX39AO00148 427 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-229ENST00000636670 SLC37A4O43826 429 aa18.28■□□□□ 0.52
CACNA1A-229ENST00000636670 WDR5P61964 334 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-229ENST00000636670 BFSP2Q13515 415 aa18.28■□□□□ 0.52
CACNA1A-229ENST00000636670 GNL2Q13823 731 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-229ENST00000636670 ETNPPLQ8TBG4 499 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms