RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 SETSIPP0DME0 302 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 KLK7P49862 253 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 TOB1P50616 345 aaPredicted RBP19.11■□□□□ 0.65
FARP1-242ENST00000627049 PPP1R9AQ9ULJ8 1098 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 DUSP10Q9Y6W6 482 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 PRLRP16471 622 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 ZNF211Q13398 564 aaPredicted RBP19.11■□□□□ 0.65
FARP1-242ENST00000627049 CYB5D1Q6P9G0 228 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 BCAP29Q9UHQ4 241 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 LRRC14Q15048 493 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 PDIA6Q15084 440 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 ERGIC2Q96RQ1 377 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 STOML1Q9UBI4 398 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 BRAFP15056 766 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 AARSP49588 968 aaKnown RBP eCLIP19.11■□□□□ 0.65
FARP1-242ENST00000627049 IRX1P78414 480 aaPredicted RBP19.11■□□□□ 0.65
FARP1-242ENST00000627049 FBXO11Q86XK2 927 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 OGFOD1Q8N543 542 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 HPS3Q969F9 1004 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 DNAJC12Q9UKB3 198 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 PLAGL2Q9UPG8 496 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 DEPDC5O75140 1603 aa19.11■□□□□ 0.65
FARP1-242ENST00000627049 CYP2D6P10635 497 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 CHRNA3P32297 505 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 ATP2A3Q93084 1043 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 RBM17Q96I25 401 aaKnown RBP19.1■□□□□ 0.65
FARP1-242ENST00000627049 ISCUQ9H1K1 167 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 BARHL2Q9NY43 387 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 CD163L1Q9NR16 1453 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 NEURL4Q96JN8 1562 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.1■□□□□ 0.65
FARP1-242ENST00000627049 TULP2O00295 520 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 CASQ2O14958 399 aaPredicted RBP19.1■□□□□ 0.65
FARP1-242ENST00000627049 SPARCL1Q14515 664 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 FBXL16Q8N461 479 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 DDX23Q9BUQ8 820 aaKnown RBP19.1■□□□□ 0.65
FARP1-242ENST00000627049 Q9H521 79 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 ARHGEF10LQ9HCE6 1279 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 EHD2Q9NZN4 543 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 WDR17Q8IZU2 1322 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 PDHA1P08559 390 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 CHN1P15882 459 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 TRIM28Q13263 835 aaKnown RBP19.1■□□□□ 0.65
FARP1-242ENST00000627049 MIER3Q7Z3K6 550 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 SRRM1Q8IYB3 904 aaKnown RBP19.1■□□□□ 0.65
FARP1-242ENST00000627049 NT5C1BQ96P26 610 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 SHPRHQ149N8 1683 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 CHD1O14646 1710 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 UBE2Q2LH0YL09 131 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 RCN2Q14257 317 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 UBE2SQ16763 222 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 GNPTABQ3T906 1256 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 LRRC23Q53EV4 343 aaPredicted RBP19.1■□□□□ 0.65
FARP1-242ENST00000627049 SALL1Q9NSC2 1324 aa19.1■□□□□ 0.65
FARP1-242ENST00000627049 TTI1O43156 1089 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 DIAPH2O60879 1101 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 MSH2P43246 934 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 ORC2Q13416 577 aaPredicted RBP19.09■□□□□ 0.65
FARP1-242ENST00000627049 TRPC3Q13507 836 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 RBM26Q5T8P6 1007 aaKnown RBP19.09■□□□□ 0.65
FARP1-242ENST00000627049 LRRC37BQ96QE4 947 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 CCT8L1PA6NM43 557 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 HERVK_113P62684 666 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 PTK2Q05397 1052 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 C7orf25Q9BPX7 421 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 PNMA2Q9UL42 364 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 MAP2P11137 1827 aaKnown RBP19.09■□□□□ 0.65
FARP1-242ENST00000627049 RASA4BC9J798 803 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 RASA4O43374 803 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 AGTP01019 485 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 TFRCP02786 760 aaKnown RBP19.09■□□□□ 0.65
FARP1-242ENST00000627049 ESRRAP11474 423 aaPredicted RBP19.09■□□□□ 0.65
FARP1-242ENST00000627049 DHX34Q14147 1143 aaKnown RBP19.09■□□□□ 0.65
FARP1-242ENST00000627049 AOC3Q16853 763 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 SH3GL3Q99963 347 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 USH1CQ9Y6N9 552 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 SARSP49591 514 aaKnown RBP19.09■□□□□ 0.65
FARP1-242ENST00000627049 USP38Q8NB14 1042 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 TGS1Q96RS0 853 aaKnown RBP19.09■□□□□ 0.65
FARP1-242ENST00000627049 VCPKMTQ9H867 229 aa19.09■□□□□ 0.65
FARP1-242ENST00000627049 PFDN1O60925 122 aa19.08■□□□□ 0.65
FARP1-242ENST00000627049 MSL3Q8N5Y2 521 aaKnown RBP19.08■□□□□ 0.65
FARP1-242ENST00000627049 USP40Q9NVE5 1235 aa19.08■□□□□ 0.65
FARP1-242ENST00000627049 INHBAP08476 426 aa19.08■□□□□ 0.65
FARP1-242ENST00000627049 CD19P15391 556 aa19.08■□□□□ 0.65
FARP1-242ENST00000627049 C3orf20Q8ND61 904 aa19.08■□□□□ 0.65
FARP1-242ENST00000627049 PPP4R1Q8TF05 950 aa19.08■□□□□ 0.65
FARP1-242ENST00000627049 PRMT1Q99873 361 aaKnown RBP19.08■□□□□ 0.65
FARP1-242ENST00000627049 CDCA7Q9BWT1 371 aaPredicted RBP19.08■□□□□ 0.65
FARP1-242ENST00000627049 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.08■□□□□ 0.65
FARP1-242ENST00000627049 CAPN6Q9Y6Q1 641 aa19.08■□□□□ 0.65
FARP1-242ENST00000627049 SERPINB6P35237 376 aa19.08■□□□□ 0.64
FARP1-242ENST00000627049 HSP90AA5PQ58FG0 334 aa19.08■□□□□ 0.64
FARP1-242ENST00000627049 NT5DC1Q5TFE4 455 aa19.08■□□□□ 0.64
FARP1-242ENST00000627049 TRIM11Q96F44 468 aa19.08■□□□□ 0.64
FARP1-242ENST00000627049 TMEM47Q9BQJ4 181 aa19.08■□□□□ 0.64
FARP1-242ENST00000627049 DCP1AQ9NPI6 582 aaPredicted RBP19.08■□□□□ 0.64
FARP1-242ENST00000627049 DKC1O60832 514 aaKnown RBP eCLIP19.08■□□□□ 0.642e-7■■■■■ 65.1
FARP1-242ENST00000627049 RPS6KA5O75582 802 aa19.08■□□□□ 0.64
FARP1-242ENST00000627049 DLATP10515 647 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms