RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 TUT1Q9H6E5 874 aaKnown RBP16.22■□□□□ 0.19
USE1-210ENST00000601662 FAM13BQ9NYF5 915 aa16.22■□□□□ 0.19
USE1-210ENST00000601662 LRWD1Q9UFC0 647 aa16.22■□□□□ 0.19
USE1-210ENST00000601662 GSTTP1A0A1W2PQM5 241 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 HAS3O00219 553 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 CSF2RAP15509 400 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 TCF7P36402 384 aaPredicted RBP16.21■□□□□ 0.19
USE1-210ENST00000601662 TXLNAP40222 546 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 UBA7P41226 1012 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 ZNF200P98182 395 aaPredicted RBP16.21■□□□□ 0.19
USE1-210ENST00000601662 KRT76Q01546 638 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 PPP2R5CQ13362 524 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 SHHQ15465 462 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 IL17AQ16552 155 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 C9orf50Q5SZB4 431 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 TMEM199Q8N511 208 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 ERMNQ8TAM6 284 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 CLIC6Q96NY7 704 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 JPH1Q9HDC5 661 aaPredicted RBP16.21■□□□□ 0.19
USE1-210ENST00000601662 SLC9A2Q9UBY0 812 aa16.21■□□□□ 0.19
USE1-210ENST00000601662 A0A1W2PPC1 479 aa16.2■□□□□ 0.18
USE1-210ENST00000601662 DHX15O43143 795 aaKnown RBP16.2■□□□□ 0.18
USE1-210ENST00000601662 ACRP10323 421 aa16.2■□□□□ 0.18
USE1-210ENST00000601662 SFNP31947 248 aa16.2■□□□□ 0.18
USE1-210ENST00000601662 ITGB3BPQ13352 177 aaPredicted RBP16.2■□□□□ 0.18
USE1-210ENST00000601662 NFKBIBQ15653 356 aa16.2■□□□□ 0.18
USE1-210ENST00000601662 RESP18Q5W5W9 173 aa16.2■□□□□ 0.18
USE1-210ENST00000601662 KRT79Q5XKE5 535 aa16.2■□□□□ 0.18
USE1-210ENST00000601662 ZNF746Q6NUN9 644 aaPredicted RBP16.2■□□□□ 0.18
USE1-210ENST00000601662 RDM1Q8NG50 284 aa16.2■□□□□ 0.18
USE1-210ENST00000601662 MRPS27Q92552 414 aaKnown RBP16.2■□□□□ 0.18
USE1-210ENST00000601662 GLG1Q92896 1179 aa16.2■□□□□ 0.18
USE1-210ENST00000601662 SCLYQ96I15 445 aa16.2■□□□□ 0.18
USE1-210ENST00000601662 PYM1Q9BRP8 204 aaKnown RBP16.2■□□□□ 0.18
USE1-210ENST00000601662 CCSER1Q9C0I3 900 aa16.2■□□□□ 0.18
USE1-210ENST00000601662 GTF2IRD1Q9UHL9 959 aa16.2■□□□□ 0.18
USE1-210ENST00000601662 LTBP2Q14767 1821 aa16.19■□□□□ 0.18
USE1-210ENST00000601662 MBD3O95983 291 aa16.19■□□□□ 0.18
USE1-210ENST00000601662 MARK3P27448 753 aa16.19■□□□□ 0.18
USE1-210ENST00000601662 FXR1P51114 621 aaKnown RBP eCLIP16.19■□□□□ 0.18
USE1-210ENST00000601662 PPIGQ13427 754 aaKnown RBP eCLIP16.19■□□□□ 0.188e-6■■■■□ 22.7
USE1-210ENST00000601662 SKOR2Q2VWA4 1001 aaPredicted RBP16.19■□□□□ 0.18
USE1-210ENST00000601662 SHC4Q6S5L8 630 aa16.19■□□□□ 0.18
USE1-210ENST00000601662 CCDC73Q6ZRK6 1079 aa16.19■□□□□ 0.18
USE1-210ENST00000601662 SESTD1Q86VW0 696 aa16.19■□□□□ 0.18
USE1-210ENST00000601662 SMAP1Q8IYB5 467 aaPredicted RBP16.19■□□□□ 0.18
USE1-210ENST00000601662 KCTD17Q8N5Z5 321 aa16.19■□□□□ 0.18
USE1-210ENST00000601662 RETREG2Q8NC44 543 aa16.19■□□□□ 0.18
USE1-210ENST00000601662 WNT8AQ9H1J5 351 aa16.19■□□□□ 0.18
USE1-210ENST00000601662 CCDC39Q9UFE4 941 aa16.19■□□□□ 0.18
USE1-210ENST00000601662 VAV3Q9UKW4 847 aa16.19■□□□□ 0.18
USE1-210ENST00000601662 ZNF215Q9UL58 517 aaPredicted RBP16.19■□□□□ 0.18
USE1-210ENST00000601662 FAM237AA0A1B0GTK4 181 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 C17orf102A2RUQ5 167 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 SOX1O00570 391 aaPredicted RBP16.18■□□□□ 0.18
USE1-210ENST00000601662 GADD45BO75293 160 aaPredicted RBP16.18■□□□□ 0.18
USE1-210ENST00000601662 SMIM10L2AP0DMW4 78 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 SMIM10L2BP0DMW5 78 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 JAK3P52333 1124 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 ACTR2P61160 394 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 GRIN1Q05586 938 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 SPIRE1Q08AE8 756 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 BFSP2Q13515 415 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 HIC1Q14526 733 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 EPHA7Q15375 998 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 HAUS3Q68CZ6 603 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 B3GNT9Q6UX72 402 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 MIER3Q7Z3K6 550 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 FSIP1Q8NA03 581 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 GJA10Q969M2 543 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 CALML4Q96GE6 196 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 RNPEPQ9H4A4 650 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 SETD4Q9NVD3 440 aa16.18■□□□□ 0.18
USE1-210ENST00000601662 WDR64B1ANS9 1081 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 MUTP22033 750 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 SPECC1Q5M775 1068 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 NCAPH2Q6IBW4 605 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 C16orf59Q7L2K0 433 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 DEFB128Q7Z7B8 93 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 NEK9Q8TD19 979 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 SYMPKQ92797 1274 aaKnown RBP16.17■□□□□ 0.18
USE1-210ENST00000601662 ATP6V0A1Q93050 837 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 LRCH3Q96II8 777 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 RNPC3Q96LT9 517 aaKnown RBP16.17■□□□□ 0.18
USE1-210ENST00000601662 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.17■□□□□ 0.18
USE1-210ENST00000601662 POLR3CQ9BUI4 534 aaPredicted RBP16.17■□□□□ 0.18
USE1-210ENST00000601662 UNC45AQ9H3U1 944 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 SMARCAD1Q9H4L7 1026 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 AZI2Q9H6S1 392 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 USP25Q9UHP3 1055 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 KCNH3Q9ULD8 1083 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 SAMM50Q9Y512 469 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 PCDHA10Q9Y5I2 948 aa16.17■□□□□ 0.18
USE1-210ENST00000601662 TRIP12Q14669 1992 aaPredicted RBP16.17■□□□□ 0.18
USE1-210ENST00000601662 POTEMA6NI47 508 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 BACH1O14867 736 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 DKC1O60832 514 aaKnown RBP eCLIP16.16■□□□□ 0.18
USE1-210ENST00000601662 CCNE2O96020 404 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 RPA1P27694 616 aa16.16■□□□□ 0.18
USE1-210ENST00000601662 TPRNQ4KMQ1 711 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms