RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 PCDHA4Q9UN74 947 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 USP15Q9Y4E8 981 aaPredicted RBP17.5■□□□□ 0.39
SYDE1-204ENST00000600440 KAT6BQ8WYB5 2073 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 DISP2A7MBM2 1401 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 SNX3O60493 162 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 NOL4O94818 638 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 FGFR1OPO95684 399 aaKnown RBP17.5■□□□□ 0.39
SYDE1-204ENST00000600440 CALM1P0DP23 149 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 CALM2P0DP24 149 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 CALM3P0DP25 149 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 CREB1P16220 341 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 ABCB4P21439 1286 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 IGHMBP2P38935 993 aaKnown RBP17.5■□□□□ 0.39
SYDE1-204ENST00000600440 SLMAPQ14BN4 828 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 PBKQ96KB5 322 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 IFT74Q96LB3 600 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 PAIP2Q9BPZ3 127 aaKnown RBP17.5■□□□□ 0.39
SYDE1-204ENST00000600440 CCSER1Q9C0I3 900 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 ADAM7Q9H2U9 754 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.5■□□□□ 0.39
SYDE1-204ENST00000600440 CCDC169A6NNP5 214 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 SUN1O94901 812 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 CSF1RP07333 972 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 GOLGA8HP0CJ92 632 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 IFI16Q16666 785 aaKnown RBP17.49■□□□□ 0.39
SYDE1-204ENST00000600440 VGLL2Q8N8G2 317 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 FBF1Q8TES7 1133 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 RNF25Q96BH1 459 aaPredicted RBP17.49■□□□□ 0.39
SYDE1-204ENST00000600440 PDE6CP51160 858 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 TRAF1Q13077 416 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 DDX17Q92841 729 aaKnown RBP17.49■□□□□ 0.39
SYDE1-204ENST00000600440 IQCDQ96DY2 449 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 TMEM237Q96Q45 408 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 VAT1LQ9HCJ6 419 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 FAM114A2Q9NRY5 505 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 DNAJC17Q9NVM6 304 aaKnown RBP17.49■□□□□ 0.39
SYDE1-204ENST00000600440 RTCBQ9Y3I0 505 aaKnown RBP17.49■□□□□ 0.39
SYDE1-204ENST00000600440 MEGF6O75095 1541 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 ALKBH5Q6P6C2 394 aaKnown RBP17.49■□□□□ 0.39
SYDE1-204ENST00000600440 CNBD1Q8NA66 436 aa17.49■□□□□ 0.39
SYDE1-204ENST00000600440 SEPT11Q9NVA2 429 aaKnown RBP17.49■□□□□ 0.39
SYDE1-204ENST00000600440 ARPP21Q9UBL0 812 aaPredicted RBP17.49■□□□□ 0.39
SYDE1-204ENST00000600440 CHD4Q14839 1912 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 OR52Z1P0C646 297 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 CYP2D6P10635 497 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 RCAN1P53805 252 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 DR1Q01658 176 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 LAMB3Q13751 1172 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 RNF220Q5VTB9 566 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 TMEM154Q6P9G4 183 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 LMNTD2Q8IXW0 634 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 FITM2Q8N6M3 262 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 RPS6KC1Q96S38 1066 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 RAB17Q9H0T7 212 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 DLGAP2Q9P1A6 1054 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 PCDHA6Q9UN73 950 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 C2CD2Q9Y426 696 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 PCDHA8Q9Y5H6 950 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 MYH4Q9Y623 1939 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 MMP13P45452 471 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 EIF3BP55884 814 aaKnown RBP17.48■□□□□ 0.39
SYDE1-204ENST00000600440 ZNF571Q7Z3V5 609 aaPredicted RBP17.48■□□□□ 0.39
SYDE1-204ENST00000600440 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.48■□□□□ 0.39
SYDE1-204ENST00000600440 CNKSR1Q969H4 720 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 RMDN2Q96LZ7 410 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 DAAM1Q9Y4D1 1078 aa17.48■□□□□ 0.39
SYDE1-204ENST00000600440 MYL1P05976 194 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 LONRF1Q17RB8 773 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 SPTY2D1Q68D10 685 aaPredicted RBP17.47■□□□□ 0.39
SYDE1-204ENST00000600440 SEPT14Q6ZU15 432 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 ACTRT1Q8TDG2 376 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 U2AF1L4Q8WU68 220 aaKnown RBP17.47■□□□□ 0.39
SYDE1-204ENST00000600440 C7orf25Q9BPX7 421 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 NUCKS1Q9H1E3 243 aaKnown RBP17.47■□□□□ 0.39
SYDE1-204ENST00000600440 COL4A3BPQ9Y5P4 624 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 CLSTN1O94985 981 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 RFC5P40937 340 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 PPP1R15BQ5SWA1 713 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 TCERG1LQ5VWI1 586 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 ANO7Q6IWH7 933 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 AADACL2Q6P093 401 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 ZNF449Q6P9G9 518 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 TRIM4Q9C037 500 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 KCNMB3Q9NPA1 279 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 PTPN22Q9Y2R2 807 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 FLT1P17948 1338 aa17.47■□□□□ 0.39
SYDE1-204ENST00000600440 ANKRD33BA6NCL7 494 aa17.46■□□□□ 0.39
SYDE1-204ENST00000600440 USP4Q13107 963 aa17.46■□□□□ 0.39
SYDE1-204ENST00000600440 TNIP1Q15025 636 aa17.46■□□□□ 0.39
SYDE1-204ENST00000600440 LRRC55Q6ZSA7 311 aa17.46■□□□□ 0.39
SYDE1-204ENST00000600440 VSIG1Q86XK7 387 aa17.46■□□□□ 0.39
SYDE1-204ENST00000600440 SYT15Q9BQS2 421 aa17.46■□□□□ 0.39
SYDE1-204ENST00000600440 OSGEPQ9NPF4 335 aa17.46■□□□□ 0.39
SYDE1-204ENST00000600440 SH3BP1Q9Y3L3 701 aa17.46■□□□□ 0.39
SYDE1-204ENST00000600440 POTEMA6NI47 508 aa17.46■□□□□ 0.39
SYDE1-204ENST00000600440 CCDC188H7C350 402 aa17.46■□□□□ 0.39
SYDE1-204ENST00000600440 RBAK-RBAKDNI3L0D1 243 aa17.46■□□□□ 0.39
SYDE1-204ENST00000600440 RASGRF2O14827 1237 aa17.46■□□□□ 0.39
SYDE1-204ENST00000600440 AHCYL1O43865 530 aa17.46■□□□□ 0.39
SYDE1-204ENST00000600440 ACSL3O95573 720 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms