RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 RHOXF2Q9BQY4 288 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 ANO3Q9BYT9 981 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 ANKZF1Q9H8Y5 726 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 PRDM4Q9UKN5 801 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 REXO2Q9Y3B8 237 aaKnown RBP8.16□□□□□ -1.1
ZNF540-206ENST00000589117 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.16□□□□□ -1.1
ZNF540-206ENST00000589117 LRRC37AA6NMS7 1700 aa8.16□□□□□ -1.1
ZNF540-206ENST00000589117 SSU72P8A0A1W2PR75 194 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 PLSCR1O15162 318 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 PPP1R11O60927 126 aaPredicted RBP8.15□□□□□ -1.1
ZNF540-206ENST00000589117 TCP10Q12799 353 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 SWI5Q1ZZU3 235 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 ABCB5Q2M3G0 1257 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 EDRF1Q3B7T1 1238 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 STYK1Q6J9G0 422 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 TATDN1Q6P1N9 297 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 GPBP1Q86WP2 473 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 KIAA0825Q8IV33 1275 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 RNF10Q8N5U6 811 aaKnown RBP8.15□□□□□ -1.1
ZNF540-206ENST00000589117 CCDC155Q8N6L0 562 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 SUPT20HQ8NEM7 779 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 HPS3Q969F9 1004 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 EPC1Q9H2F5 836 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 KCNMB3Q9NPA1 279 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 CEP72Q9P209 647 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 SIK3Q9Y2K2 1263 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 PCDHA13Q9Y5I0 950 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 MYH8P13535 1937 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 FOCADQ5VW36 1801 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 F5H6K3 240 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 MAP2K7O14733 419 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 POLR3GO15318 223 aaPredicted RBP8.15□□□□□ -1.1
ZNF540-206ENST00000589117 ENTPD3O75355 529 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 LCA5LO95447 670 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 MMP10P09238 476 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 TCP1P17987 556 aaKnown RBP8.15□□□□□ -1.1
ZNF540-206ENST00000589117 RPL13P26373 211 aaKnown RBP8.15□□□□□ -1.1
ZNF540-206ENST00000589117 ZNF76P36508 570 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 PAFAH1B1P43034 410 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 MAGEA1P43355 309 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 KIF11P52732 1056 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 ARHGAP4P98171 946 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 KLRC3Q07444 240 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 NFIAQ12857 509 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 ADAM9Q13443 819 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 PTPRNQ16849 979 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 Q4G0T1 1027 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 BEND6Q5SZJ8 279 aaPredicted RBP8.15□□□□□ -1.1
ZNF540-206ENST00000589117 CC2D2BQ6DHV5 1058 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 USP17L6PQ6QN14 398 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 CLEC10AQ8IUN9 316 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 RUBCNQ92622 972 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 CNKSR1Q969H4 720 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 DNAJC19Q96DA6 116 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 MBOAT7Q96N66 472 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 EHMT1Q9H9B1 1298 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 DBNDD1Q9H9R9 158 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 TMOD2Q9NZR1 351 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 CXXC1Q9P0U4 656 aaPredicted RBP8.15□□□□□ -1.1
ZNF540-206ENST00000589117 L1RE1Q9UN81 338 aa8.15□□□□□ -1.1
ZNF540-206ENST00000589117 MACROD2A1Z1Q3 448 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 RASSF10A6NK89 507 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 ARHGAP33O14559 1287 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 ENC1O14682 589 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 SERPING1P05155 500 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 BMP3P12645 472 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 RPA1P27694 616 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 OAS2P29728 719 aaKnown RBP8.14□□□□□ -1.11
ZNF540-206ENST00000589117 EIF4A3P38919 411 aaKnown RBP8.14□□□□□ -1.11
ZNF540-206ENST00000589117 KLK7P49862 253 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 EML3Q32P44 896 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 PRR16Q569H4 304 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 TDRD12Q587J7 1177 aaKnown RBP8.14□□□□□ -1.11
ZNF540-206ENST00000589117 CCDC181Q5TID7 509 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 SFMBT2Q5VUG0 894 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 NCAPH2Q6IBW4 605 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 LRRC55Q6ZSA7 311 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 GOLGA6L1Q8N7Z2 621 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 NOX5Q96PH1 765 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 NUDT12Q9BQG2 462 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 MXD3Q9BW11 206 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 ZHX3Q9H4I2 956 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 VIPAS39Q9H9C1 493 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 RNF14Q9UBS8 474 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 TRIM10Q9UDY6 481 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 A0A0U1RQG5 324 aaPredicted RBP8.14□□□□□ -1.11
ZNF540-206ENST00000589117 LRRC53A6NM62 1247 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 CALUO43852 315 aaPredicted RBP8.14□□□□□ -1.11
ZNF540-206ENST00000589117 EDIL3O43854 480 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 ECE2O60344 883 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 ATP1A1P05023 1023 aaKnown RBP8.14□□□□□ -1.11
ZNF540-206ENST00000589117 JUNDP17535 347 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 APLP1P51693 650 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 USP14P54578 494 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 NAP1L1P55209 391 aaKnown RBP8.14□□□□□ -1.11
ZNF540-206ENST00000589117 CYP27A1Q02318 531 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 ITIH3Q06033 890 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 LRRC41Q15345 812 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 ZCWPW2Q504Y3 356 aa8.14□□□□□ -1.11
ZNF540-206ENST00000589117 C10orf76Q5T2E6 689 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms