RNA–Protein interactions for RNA: ENST00000586988.5

DNMT1-211, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-211ENST00000586988 PLIN2Q99541 437 aa13.18□□□□□ -0.3
DNMT1-211ENST00000586988 UPF3AQ9H1J1 476 aaKnown RBP13.18□□□□□ -0.3
DNMT1-211ENST00000586988 CLSTN2Q9H4D0 955 aa13.18□□□□□ -0.3
DNMT1-211ENST00000586988 SMARCAD1Q9H4L7 1026 aa13.18□□□□□ -0.3
DNMT1-211ENST00000586988 BCAS3Q9H6U6 928 aa13.18□□□□□ -0.3
DNMT1-211ENST00000586988 XPNPEP3Q9NQH7 507 aa13.18□□□□□ -0.3
DNMT1-211ENST00000586988 SERTAD1Q9UHV2 236 aa13.18□□□□□ -0.3
DNMT1-211ENST00000586988 MAFBQ9Y5Q3 323 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-211ENST00000586988 FRMPD3Q5JV73 1810 aa13.18□□□□□ -0.3
DNMT1-211ENST00000586988 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 SYNRGQ9UMZ2 1314 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 KPNA6O60684 536 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 EYA4O95677 639 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 OATP04181 439 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 LGALS2P05162 132 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 C6orf222P0C671 652 aaPredicted RBP13.17□□□□□ -0.3
DNMT1-211ENST00000586988 XRCC6P12956 609 aaKnown RBP eCLIP13.17□□□□□ -0.3
DNMT1-211ENST00000586988 YWHABP31946 246 aaKnown RBP13.17□□□□□ -0.3
DNMT1-211ENST00000586988 NKX3-2P78367 333 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 ECM1Q16610 540 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 FSCN1Q16658 493 aaKnown RBP13.17□□□□□ -0.3
DNMT1-211ENST00000586988 UGCGQ16739 394 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 LONRF3Q496Y0 759 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 NAALADL2Q58DX5 795 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 XKR3Q5GH77 459 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 CAVIN1Q6NZI2 390 aaKnown RBP13.17□□□□□ -0.3
DNMT1-211ENST00000586988 OTUD6AQ7L8S5 288 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 CKAP2LQ8IYA6 745 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 SH3TC2Q8TF17 1288 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 LENG1Q96BZ8 264 aaPredicted RBP13.17□□□□□ -0.3
DNMT1-211ENST00000586988 KATNAL1Q9BW62 490 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 PANK2Q9BZ23 570 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.17□□□□□ -0.33e-6■■□□□ 14.4
DNMT1-211ENST00000586988 BLOC1S4Q9NUP1 217 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 ERAP1Q9NZ08 941 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 KCND2Q9NZV8 630 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 DBR1Q9UK59 544 aaKnown RBP13.17□□□□□ -0.3
DNMT1-211ENST00000586988 PPME1Q9Y570 386 aa13.17□□□□□ -0.3
DNMT1-211ENST00000586988 MYH9P35579 1960 aaKnown RBP13.17□□□□□ -0.3
DNMT1-211ENST00000586988 ARHGEF35A5YM69 484 aa13.16□□□□□ -0.3
DNMT1-211ENST00000586988 PLA2G4BP0C869 781 aa13.16□□□□□ -0.3
DNMT1-211ENST00000586988 CST5P28325 142 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-211ENST00000586988 UTP14CQ5TAP6 766 aaKnown RBP13.16□□□□□ -0.3
DNMT1-211ENST00000586988 SV2BQ7L1I2 683 aa13.16□□□□□ -0.3
DNMT1-211ENST00000586988 BHMT2Q9H2M3 363 aa13.16□□□□□ -0.3
DNMT1-211ENST00000586988 PRDM10Q9NQV6 1147 aa13.16□□□□□ -0.3
DNMT1-211ENST00000586988 ANKEF1Q9NU02 776 aa13.16□□□□□ -0.3
DNMT1-211ENST00000586988 WRAP73Q9P2S5 460 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-211ENST00000586988 SEPT9Q9UHD8 586 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-211ENST00000586988 TELO2Q9Y4R8 837 aa13.16□□□□□ -0.3
DNMT1-211ENST00000586988 ARID2Q68CP9 1835 aa13.16□□□□□ -0.3
DNMT1-211ENST00000586988 E9PMD0 336 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 ZNF862O60290 1169 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 ADAMTS4O75173 837 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 LETM1O95202 739 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-211ENST00000586988 F2P00734 622 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 SSBP05455 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
DNMT1-211ENST00000586988 ZNF286BP0CG31 522 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 PTGS1P23219 599 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 MKRN4PQ13434 485 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-211ENST00000586988 POSTNQ15063 836 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 KCNK18Q7Z418 384 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 RNF180Q86T96 592 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 TRIM50Q86XT4 487 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 PCSK9Q8NBP7 692 aaKnown RBP13.15□□□□□ -0.3
DNMT1-211ENST00000586988 ATP8B4Q8TF62 1192 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 BBXQ8WY36 941 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-211ENST00000586988 PCYT2Q99447 389 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 NRBP2Q9NSY0 501 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-211ENST00000586988 KBTBD4Q9NVX7 518 aa13.15□□□□□ -0.3
DNMT1-211ENST00000586988 H3BRB1 525 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 GTPBP6O43824 516 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-211ENST00000586988 RARRES1P49788 294 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 MCM6Q14566 821 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 GNASQ5JWF2 1037 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 SH3RF1Q7Z6J0 888 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 EXOC8Q8IYI6 725 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 SYT2Q8N9I0 419 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-211ENST00000586988 PIGOQ8TEQ8 1089 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 LRRC15Q8TF66 581 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 PAGE5Q96GU1 130 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 CEP170P1Q96L14 293 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 C16orf70Q9BSU1 422 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 ANP32EQ9BTT0 268 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 TIPINQ9BVW5 301 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 TUT1Q9H6E5 874 aaKnown RBP13.14□□□□□ -0.31
DNMT1-211ENST00000586988 PAK6Q9NQU5 681 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-211ENST00000586988 TMEM63CQ9P1W3 806 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 TRPC6Q9Y210 931 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 COL1A2P08123 1366 aa13.14□□□□□ -0.31
DNMT1-211ENST00000586988 HBP1O60381 514 aa13.13□□□□□ -0.31
DNMT1-211ENST00000586988 CAPN15O75808 1086 aa13.13□□□□□ -0.31
DNMT1-211ENST00000586988 SMC2O95347 1197 aa13.13□□□□□ -0.31
DNMT1-211ENST00000586988 PGK1P00558 417 aa13.13□□□□□ -0.31
DNMT1-211ENST00000586988 KRT18P05783 430 aaKnown RBP13.13□□□□□ -0.31
DNMT1-211ENST00000586988 MYL3P08590 195 aa13.13□□□□□ -0.31
DNMT1-211ENST00000586988 MARK3P27448 753 aa13.13□□□□□ -0.31
DNMT1-211ENST00000586988 RFC5P40937 340 aa13.13□□□□□ -0.31
DNMT1-211ENST00000586988 AFMP43652 599 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms