RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 LZTS2Q9BRK4 669 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 PDCD2LQ9BRP1 358 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 SPZ1Q9BXG8 430 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 LY9Q9HBG7 655 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 ANO2Q9NQ90 1003 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 MRVI1Q9Y6F6 885 aa12.84□□□□□ -0.35
CCDC47-206ENST00000584112 CCDC69A6NI79 296 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 SLC27A2O14975 620 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 PRC1O43663 620 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 CYTH3O43739 400 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 AMHP03971 560 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 MYCLP12524 364 aaPredicted RBP12.83□□□□□ -0.36
CCDC47-206ENST00000584112 CASTP20810 708 aaKnown RBP12.83□□□□□ -0.36
CCDC47-206ENST00000584112 DNAJB1P25685 340 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 SMARCA1P28370 1054 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 CCND2P30279 289 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 GNAQP50148 359 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 CHMP4BP1P59074 171 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 DGKDQ16760 1214 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 SLC35G1Q2M3R5 365 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 VARS2Q5ST30 1063 aaKnown RBP12.83□□□□□ -0.36
CCDC47-206ENST00000584112 RNF20Q5VTR2 975 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 NFXL1Q6ZNB6 911 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 AFG1LQ8WV93 481 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 SEC63Q9UGP8 760 aaKnown RBP12.83□□□□□ -0.36
CCDC47-206ENST00000584112 CDH22Q9UJ99 828 aa12.83□□□□□ -0.36
CCDC47-206ENST00000584112 DDX41Q9UJV9 622 aaKnown RBP12.83□□□□□ -0.36
CCDC47-206ENST00000584112 TAF4O00268 1085 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 EFCAB14O75071 495 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 LINC00271P0C7V0 271 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 SP9P0CG40 484 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 CALM1P0DP23 149 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 CALM2P0DP24 149 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 CALM3P0DP25 149 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 TGFB3P10600 412 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 HOXA13P31271 388 aaPredicted RBP12.82□□□□□ -0.36
CCDC47-206ENST00000584112 LAMC2Q13753 1193 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 MBTPS1Q14703 1052 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 PGM5Q15124 567 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 NECTIN1Q15223 517 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 PTGISQ16647 500 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 CREB3L3Q68CJ9 461 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 VSIG10LQ86VR7 867 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 DHX37Q8IY37 1157 aaKnown RBP12.82□□□□□ -0.36
CCDC47-206ENST00000584112 RRP36Q96EU6 259 aaKnown RBP12.82□□□□□ -0.36
CCDC47-206ENST00000584112 KATNAL1Q9BW62 490 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 APOL5Q9BWW9 433 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 USP18Q9UMW8 372 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 MYO18BQ8IUG5 2567 aa12.82□□□□□ -0.36
CCDC47-206ENST00000584112 C2CD4DB7Z1M9 353 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 C5orf67F2Z3F1 127 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 SH2B2O14492 632 aaPredicted RBP12.81□□□□□ -0.36
CCDC47-206ENST00000584112 STAM2O75886 525 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 MMP1P03956 469 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 TGM1P22735 817 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 BMPR1AP36894 532 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 LIFRP42702 1097 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 GNPTABQ3T906 1256 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 ZC3H14Q6PJT7 736 aaKnown RBP12.81□□□□□ -0.36
CCDC47-206ENST00000584112 SESTD1Q86VW0 696 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 FCHSD1Q86WN1 690 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 CCDC155Q8N6L0 562 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 VN1R2Q8NFZ6 395 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 PPTC7Q8NI37 304 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 CAGE1Q8TC20 777 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 CUL5Q93034 780 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 C11orf84Q9BUA3 381 aaPredicted RBP12.81□□□□□ -0.36
CCDC47-206ENST00000584112 MYL10Q9BUA6 226 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 PARD6AQ9NPB6 346 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 AKAP13Q12802 2813 aa12.81□□□□□ -0.36
CCDC47-206ENST00000584112 COL4A3Q01955 1670 aa12.8□□□□□ -0.36
CCDC47-206ENST00000584112 WDR81Q562E7 1941 aa12.8□□□□□ -0.36
CCDC47-206ENST00000584112 MYH9P35579 1960 aaKnown RBP12.8□□□□□ -0.36
CCDC47-206ENST00000584112 CKBP12277 381 aa12.8□□□□□ -0.36
CCDC47-206ENST00000584112 SHC2P98077 582 aa12.8□□□□□ -0.36
CCDC47-206ENST00000584112 SOWAHCQ53LP3 525 aaPredicted RBP12.8□□□□□ -0.36
CCDC47-206ENST00000584112 N4BP2L1Q5TBK1 243 aaPredicted RBP12.8□□□□□ -0.36
CCDC47-206ENST00000584112 PIBF1Q8WXW3 757 aa12.8□□□□□ -0.36
CCDC47-206ENST00000584112 RTP3Q9BQQ7 232 aa12.8□□□□□ -0.36
CCDC47-206ENST00000584112 SLC12A7Q9Y666 1083 aa12.8□□□□□ -0.36
CCDC47-206ENST00000584112 FRMPD4Q14CM0 1322 aa12.8□□□□□ -0.36
CCDC47-206ENST00000584112 LOXHD1Q8IVV2 1947 aa12.8□□□□□ -0.36
CCDC47-206ENST00000584112 TENM4Q6N022 2769 aa12.8□□□□□ -0.36
CCDC47-206ENST00000584112 PPFIA4O75335 1185 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 CDC45O75419 566 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 GGPS1O95749 300 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 F2P00734 622 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 PSEN2P49810 448 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 CELF3Q5SZQ8 465 aaKnown RBP12.79□□□□□ -0.36
CCDC47-206ENST00000584112 MYSM1Q5VVJ2 828 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 GDF6Q6KF10 455 aaPredicted RBP12.79□□□□□ -0.36
CCDC47-206ENST00000584112 TRAF7Q6Q0C0 670 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 SYNE3Q6ZMZ3 975 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 PRR23BQ6ZRT6 265 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 SGMS1Q86VZ5 419 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 C7orf31Q8N865 590 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 DBF4BQ8NFT6 615 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 IL31RAQ8NI17 732 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 SMARCC2Q8TAQ2 1214 aa12.79□□□□□ -0.36
CCDC47-206ENST00000584112 KAT2BQ92831 832 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms