RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911	ZP2	Q05996	745 aa		7.77	□□□□□ -1.17
HERPUD1-208	ENST00000563911	KCNAB2	Q13303	367 aa		7.77	□□□□□ -1.17
HERPUD1-208	ENST00000563911	NFIX	Q14938	502 aa		7.77	□□□□□ -1.17
HERPUD1-208	ENST00000563911	PTPRO	Q16827	1216 aa		7.77	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ANGEL2	Q5VTE6	544 aa	Known RBP	7.77	□□□□□ -1.17
HERPUD1-208	ENST00000563911	CYP2R1	Q6VVX0	501 aa		7.77	□□□□□ -1.17
HERPUD1-208	ENST00000563911	BRAP	Q7Z569	592 aa		7.77	□□□□□ -1.17
HERPUD1-208	ENST00000563911	CCDC103	Q8IW40	242 aa		7.77	□□□□□ -1.17
HERPUD1-208	ENST00000563911	GSTCD	Q8NEC7	633 aa		7.77	□□□□□ -1.17
HERPUD1-208	ENST00000563911	FCRL2	Q96LA5	508 aa	Predicted RBP	7.77	□□□□□ -1.17
HERPUD1-208	ENST00000563911	MMP19	Q99542	508 aa		7.77	□□□□□ -1.17
HERPUD1-208	ENST00000563911	TRIM39	Q9HCM9	518 aa		7.77	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ERVK13-1	Q9NX77	482 aa		7.77	□□□□□ -1.17
HERPUD1-208	ENST00000563911	TJP1	Q07157	1748 aa		7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	MED26	O95402	600 aa		7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	HMGB2	P26583	209 aa	Known RBP	7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	CNNM4	Q6P4Q7	775 aa		7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	RSPO2	Q6UXX9	243 aa	Predicted RBP	7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	SPRED2	Q7Z698	418 aa		7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	FGD2	Q7Z6J4	655 aa		7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	DNAJC10	Q8IXB1	793 aa		7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	IFNL3	Q8IZI9	196 aa		7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	GPR27	Q9NS67	375 aa		7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	SLAMF8	Q9P0V8	285 aa		7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	MAGEC2	Q9UBF1	373 aa	Predicted RBP	7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	NPFFR2	Q9Y5X5	522 aa		7.76	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ANKRD26	Q9UPS8	1709 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	DDN	O94850	711 aa	Predicted RBP	7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	CRTAM	O95727	393 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	LCP1	P13796	627 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	GUCY1A3	Q02108	690 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	TESK1	Q15569	626 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	INF2	Q27J81	1249 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	HLA-DQA1	Q5Y7H0	255 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	MTDH	Q86UE4	582 aa	Known RBP	7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	TMEM52	Q8NDY8	209 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ZFYVE21	Q9BQ24	234 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ADAMTS10	Q9H324	1103 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	INTS7	Q9NVH2	962 aa	Known RBP	7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	CCDC39	Q9UFE4	941 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ZNF281	Q9Y2X9	895 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	PCDHA9	Q9Y5H5	950 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	AFDN	P55196	1824 aa	Known RBP	7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	SOS1	Q07889	1333 aa	Predicted RBP	7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	PASK	Q96RG2	1323 aa		7.75	□□□□□ -1.17
HERPUD1-208	ENST00000563911	CNTNAP1	P78357	1384 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	KIF20B	Q96Q89	1820 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	OPA1	O60313	960 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	DNAJC8	O75937	253 aa	Predicted RBP	7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	RASGRP1	O95267	797 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	PRNP	P04156	253 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	NAT1	P18440	290 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	TNNT2	P45379	298 aa	Predicted RBP	7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	LBX1	P52954	281 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	GPR85	P60893	370 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	DUSP4	Q13115	394 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	LRRTM3	Q86VH5	581 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	VSIG10L	Q86VR7	867 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	DTX1	Q86Y01	620 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	JAML	Q86YT9	394 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	RCBTB1	Q8NDN9	531 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	FLCN	Q8NFG4	579 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	SCLY	Q96I15	445 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	GPATCH3	Q96I76	525 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ALPK1	Q96QP1	1244 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	TNFRSF10D	Q9UBN6	386 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ANGEL1	Q9UNK9	670 aa	Known RBP	7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	PCDHA8	Q9Y5H6	950 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	PCDHA2	Q9Y5H9	948 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	TNPO3	Q9Y5L0	923 aa	Known RBP	7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	COL4A3BP	Q9Y5P4	624 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	NRXN2	Q9P2S2	1712 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	CCDC88A	Q3V6T2	1871 aa		7.74	□□□□□ -1.17
HERPUD1-208	ENST00000563911	TIAM2	Q8IVF5	1701 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	MYO1B	O43795	1136 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	PDE8A	O60658	829 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	MSC	O60682	206 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ASL	P04424	464 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	SERPINB2	P05120	415 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	CYP19A1	P11511	503 aa	Predicted RBP	7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ITGB7	P26010	798 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	CNGA1	P29973	690 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	CD97	P48960	835 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	SLC39A6	Q13433	755 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	RALGPS1	Q5JS13	557 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	MBLAC2	Q68D91	279 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ZNF530	Q6P9A1	599 aa	Predicted RBP	7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	LBX2	Q6XYB7	198 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	C2CD5	Q86YS7	1000 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ANKRD13A	Q8IZ07	590 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	TTLL6	Q8N841	843 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	ABHD8	Q96I13	439 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	MAP6	Q96JE9	813 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	CHAMP1	Q96JM3	812 aa		7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	TIMM13	Q9Y5L4	95 aa	Predicted RBP	7.73	□□□□□ -1.17
HERPUD1-208	ENST00000563911	hCG_2014768	A0A024R1R8	64 aa		7.72	□□□□□ -1.17
HERPUD1-208	ENST00000563911		A0A087X0B3	334 aa		7.72	□□□□□ -1.17
HERPUD1-208	ENST00000563911	TCRBV16S1A1N1	A0A5B0	115 aa		7.72	□□□□□ -1.17

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