RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 AK8Q96MA6 479 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 POLR3CQ9BUI4 534 aaPredicted RBP18.35■□□□□ 0.53
USB1-206ENST00000562534 TRPV6Q9H1D0 765 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 TUFT1Q9NNX1 390 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 TMEM39AQ9NV64 488 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 RGL1Q9NZL6 768 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 PRKAG2Q9UGJ0 569 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 VWA3AA6NCI4 1184 aa18.34■□□□□ 0.53
USB1-206ENST00000562534 DDX11L8A8MPP1 907 aa18.34■□□□□ 0.53
USB1-206ENST00000562534 ZNF862O60290 1169 aa18.34■□□□□ 0.53
USB1-206ENST00000562534 OATP04181 439 aa18.34■□□□□ 0.53
USB1-206ENST00000562534 RPA1P27694 616 aa18.34■□□□□ 0.53
USB1-206ENST00000562534 HOXC8P31273 242 aa18.34■□□□□ 0.53
USB1-206ENST00000562534 LONP1P36776 959 aaKnown RBP18.34■□□□□ 0.53
USB1-206ENST00000562534 ADAM17P78536 824 aa18.34■□□□□ 0.53
USB1-206ENST00000562534 STK38Q15208 465 aa18.34■□□□□ 0.53
USB1-206ENST00000562534 GRIK4Q16099 956 aa18.34■□□□□ 0.53
USB1-206ENST00000562534 KRT79Q5XKE5 535 aa18.34■□□□□ 0.53
USB1-206ENST00000562534 HAUS3Q68CZ6 603 aa18.34■□□□□ 0.53
USB1-206ENST00000562534 LINC00301Q8NCQ3 95 aa18.34■□□□□ 0.53
USB1-206ENST00000562534 PPP1R13LQ8WUF5 828 aa18.34■□□□□ 0.53
USB1-206ENST00000562534 NIFKQ9BYG3 293 aaKnown RBP18.34■□□□□ 0.53
USB1-206ENST00000562534 TRMT13Q9NUP7 481 aaKnown RBP18.34■□□□□ 0.53
USB1-206ENST00000562534 SRPRBQ9Y5M8 271 aaKnown RBP18.34■□□□□ 0.53
USB1-206ENST00000562534 COL1A2P08123 1366 aa18.33■□□□□ 0.53
USB1-206ENST00000562534 LYPLA2O95372 231 aa18.33■□□□□ 0.52
USB1-206ENST00000562534 YEATS4O95619 227 aa18.33■□□□□ 0.52
USB1-206ENST00000562534 PRKCEQ02156 737 aa18.33■□□□□ 0.52
USB1-206ENST00000562534 PTK7Q13308 1070 aa18.33■□□□□ 0.52
USB1-206ENST00000562534 CTTNQ14247 550 aaKnown RBP18.33■□□□□ 0.52
USB1-206ENST00000562534 UGCGQ16739 394 aa18.33■□□□□ 0.52
USB1-206ENST00000562534 FOXD4L6Q3SYB3 417 aaPredicted RBP18.33■□□□□ 0.52
USB1-206ENST00000562534 FOXD4L3Q6VB84 417 aaPredicted RBP18.33■□□□□ 0.52
USB1-206ENST00000562534 TRMT1LQ7Z2T5 733 aaKnown RBP18.33■□□□□ 0.52
USB1-206ENST00000562534 CATSPER3Q86XQ3 398 aa18.33■□□□□ 0.52
USB1-206ENST00000562534 C7orf61Q8IZ16 206 aa18.33■□□□□ 0.52
USB1-206ENST00000562534 IPO9Q96P70 1041 aaKnown RBP18.33■□□□□ 0.52
USB1-206ENST00000562534 LXNQ9BS40 222 aa18.33■□□□□ 0.52
USB1-206ENST00000562534 FTOQ9C0B1 505 aaKnown RBP eCLIP18.33■□□□□ 0.52
USB1-206ENST00000562534 KIAA0355O15063 1070 aa18.32■□□□□ 0.52
USB1-206ENST00000562534 SPTLC2O15270 562 aa18.32■□□□□ 0.52
USB1-206ENST00000562534 PPP6R2O75170 966 aa18.32■□□□□ 0.52
USB1-206ENST00000562534 STBD1O95210 358 aa18.32■□□□□ 0.52
USB1-206ENST00000562534 RPLP2P05387 115 aaKnown RBP18.32■□□□□ 0.52
USB1-206ENST00000562534 SPATA31C1P0DKV0 1188 aa18.32■□□□□ 0.52
USB1-206ENST00000562534 CYP4A11Q02928 519 aa18.32■□□□□ 0.52
USB1-206ENST00000562534 DNM1Q05193 864 aaKnown RBP18.32■□□□□ 0.52
USB1-206ENST00000562534 EXOC8Q8IYI6 725 aa18.32■□□□□ 0.52
USB1-206ENST00000562534 KCTD17Q8N5Z5 321 aa18.32■□□□□ 0.52
USB1-206ENST00000562534 LMBR1Q8WVP7 490 aa18.32■□□□□ 0.52
USB1-206ENST00000562534 NACC1Q96RE7 527 aa18.32■□□□□ 0.52
USB1-206ENST00000562534 PPME1Q9Y570 386 aa18.32■□□□□ 0.52
USB1-206ENST00000562534 MBLAC1A4D2B0 266 aaPredicted RBP18.31■□□□□ 0.52
USB1-206ENST00000562534 MAGEB2O15479 319 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 TREHO43280 583 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 SLC26A4O43511 780 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 KLRC1P26715 233 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 MARCKSP29966 332 aaPredicted RBP18.31■□□□□ 0.52
USB1-206ENST00000562534 YWHABP31946 246 aaKnown RBP18.31■□□□□ 0.52
USB1-206ENST00000562534 CCT6AP40227 531 aaKnown RBP18.31■□□□□ 0.52
USB1-206ENST00000562534 UBA7P41226 1012 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 IGBP1P78318 339 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 KRT85P78386 507 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 ZNF200P98182 395 aaPredicted RBP18.31■□□□□ 0.52
USB1-206ENST00000562534 BFSP2Q13515 415 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 HIC1Q14526 733 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 MARCH8Q5T0T0 291 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 TAF2Q6P1X5 1199 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 SERINC5Q86VE9 423 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 CCDC155Q8N6L0 562 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 KRI1Q8N9T8 703 aaKnown RBP18.31■□□□□ 0.52
USB1-206ENST00000562534 PDLIM7Q9NR12 457 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 ANKEF1Q9NU02 776 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 TUBE1Q9UJT0 475 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 RCOR1Q9UKL0 485 aa18.31■□□□□ 0.52
USB1-206ENST00000562534 MED24O75448 989 aa18.3■□□□□ 0.52
USB1-206ENST00000562534 CYP2C9P11712 490 aa18.3■□□□□ 0.52
USB1-206ENST00000562534 RAG1P15918 1043 aa18.3■□□□□ 0.52
USB1-206ENST00000562534 TARBP2Q15633 366 aaKnown RBP18.3■□□□□ 0.52
USB1-206ENST00000562534 MTHFD1LQ6UB35 978 aa18.3■□□□□ 0.52
USB1-206ENST00000562534 ANO5Q75V66 913 aa18.3■□□□□ 0.52
USB1-206ENST00000562534 RETREG2Q8NC44 543 aa18.3■□□□□ 0.52
USB1-206ENST00000562534 CAGE1Q8TC20 777 aa18.3■□□□□ 0.52
USB1-206ENST00000562534 KCNG4Q8TDN1 519 aa18.3■□□□□ 0.52
USB1-206ENST00000562534 SNX29Q8TEQ0 813 aa18.3■□□□□ 0.52
USB1-206ENST00000562534 PRDM5Q9NQX1 630 aaPredicted RBP18.3■□□□□ 0.52
USB1-206ENST00000562534 CHMP5Q9NZZ3 219 aa18.3■□□□□ 0.52
USB1-206ENST00000562534 WRAP73Q9P2S5 460 aaPredicted RBP18.3■□□□□ 0.52
USB1-206ENST00000562534 SEPT9Q9UHD8 586 aaPredicted RBP18.3■□□□□ 0.52
USB1-206ENST00000562534 FBXO2Q9UK22 296 aaPredicted RBP18.3■□□□□ 0.52
USB1-206ENST00000562534 TBX21Q9UL17 535 aa18.3■□□□□ 0.52
USB1-206ENST00000562534 PCDHA2Q9Y5H9 948 aa18.3■□□□□ 0.52
USB1-206ENST00000562534 MYH9P35579 1960 aaKnown RBP18.3■□□□□ 0.52
USB1-206ENST00000562534 TRIM43BA6NCK2 446 aa18.29■□□□□ 0.52
USB1-206ENST00000562534 ZBTB42B2RXF5 422 aa18.29■□□□□ 0.52
USB1-206ENST00000562534 TIMP1P01033 207 aa18.29■□□□□ 0.52
USB1-206ENST00000562534 CDC25AP30304 524 aa18.29■□□□□ 0.52
USB1-206ENST00000562534 SH3RF1Q7Z6J0 888 aa18.29■□□□□ 0.52
USB1-206ENST00000562534 RPAINQ86UA6 219 aa18.29■□□□□ 0.52
USB1-206ENST00000562534 RSPH3Q86UC2 560 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms