RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 M0R2C6 588 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 COPEO14579 308 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 HSPA2P54652 639 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 FAM160B2Q86V87 743 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 ERICH1Q86X53 443 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 ZSWIM5Q9P217 1185 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 GYG2O15488 501 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 SORBS3O60504 671 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 ZRANB2O95218 330 aaKnown RBP eCLIP14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 HSPA4LO95757 839 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 CACNB1Q02641 598 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 SLC12A1Q13621 1099 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 DCPSQ96C86 337 aaKnown RBP14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 AP1M1Q9BXS5 423 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 SLC13A4Q9UKG4 626 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 MMEP08473 750 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 PMLP29590 882 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 HP1BP3Q5SSJ5 553 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 DPP9Q86TI2 863 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 CEP19Q96LK0 163 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 TLR7Q9NYK1 1049 aaKnown RBP14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 APOBEC2Q9Y235 224 aaKnown RBP14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 PLAAQ9Y263 795 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 PCDHB6Q9Y5E3 794 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 WDR91A4D1P6 747 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 PSAPP07602 524 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 CCND2P30279 289 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 HNRNPH2P55795 449 aaKnown RBP14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 TMPRSS15P98073 1019 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 UNC13DQ70J99 1090 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 ABTB1Q969K4 478 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 TSC22D3Q99576 134 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 AP5M1Q9H0R1 490 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 ANTXR1Q9H6X2 564 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 UBN1Q9NPG3 1134 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 SLAIN2Q9P270 581 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 WDR64B1ANS9 1081 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 ACSL3O95573 720 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 PAPOLAP51003 745 aaKnown RBP14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 STAT2P52630 851 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 SLC7A5Q01650 507 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 NECTIN1Q15223 517 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 SYDE2Q5VT97 1194 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 PI4K2BQ8TCG2 481 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 FTOQ9C0B1 505 aaKnown RBP eCLIP14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 PPARGC1AQ9UBK2 798 aaKnown RBP14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 LOC102724428A0A0B4J2F2 783 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 KPNA7A9QM74 516 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 PAMP19021 973 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 ARHGDIAP52565 204 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 SIK1P57059 783 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 TRIP13Q15645 432 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 KCTD1Q719H9 257 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 ARHGEF25Q86VW2 580 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 RYBPQ8N488 228 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 RNF139Q8WU17 664 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 SCG3Q8WXD2 468 aaKnown RBP14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 KIAA1586Q9HCI6 787 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 CEP72Q9P209 647 aa14.17□□□□□ -0.14
CSPG4P11-201ENST00000560634 APBA3O96018 575 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 OCA2Q04671 838 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 SEMA3FQ13275 785 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 SPICE1Q8N0Z3 855 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 OSBP2Q969R2 916 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 PNMA6FA0A0J9YX94 578 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 LGALS16A8MUM7 142 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 K7ERI5 159 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 ATP1A3P13637 1013 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 CDC25AP30304 524 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 EPHB1P54762 984 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 LLGL1Q15334 1064 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 KLHL38Q2WGJ6 581 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 TRMT10CQ7L0Y3 403 aaKnown RBP14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 PARD3BQ8TEW8 1205 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 ZMAT2Q96NC0 199 aaKnown RBP14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 FIS1Q9Y3D6 152 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 MYO1CO00159 1063 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 MEIS1O00470 390 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 BAG6P46379 1132 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 TMEM35BQ8NCS4 154 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 CFAP36Q96G28 342 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 PLEKHF1Q96S99 279 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 ANLNQ9NQW6 1124 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 CTIFO43310 598 aaKnown RBP14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 AP3B2Q13367 1082 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 SUPT20HL1Q3ZLR7 823 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 COA7Q96BR5 231 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 PI4KBQ9UBF8 816 aa14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 G3BP2Q9UN86 482 aaKnown RBP14.16□□□□□ -0.14
CSPG4P11-201ENST00000560634 CD2BP2O95400 341 aaKnown RBP14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 DYNLL1P63167 89 aaKnown RBP14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 UBXN2AP68543 259 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 RESP18Q5W5W9 173 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 LCA5Q86VQ0 697 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 YY1AP1Q9H869 796 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 RPF1Q9H9Y2 349 aaKnown RBP14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 SAYSD1Q9NPB0 183 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 TMEM247A6NEH6 219 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms