RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 FECHP22830 423 aa15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 CASQ1P31415 396 aa15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 TSR1Q2NL82 804 aaKnown RBP15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 DCAF17Q5H9S7 520 aaPredicted RBP15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 TREML2Q5T2D2 321 aa15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 PDCD2LQ9BRP1 358 aa15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 ZSWIM4Q9H7M6 989 aa15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 PXMP2Q9NR77 195 aa15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 ZNF214Q9UL59 606 aaPredicted RBP15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 GUCA1BQ9UMX6 200 aa15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 EPN1Q9Y6I3 576 aaPredicted RBP15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 PHLPP2Q6ZVD8 1323 aa15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 YBX3P16989 372 aaKnown RBP eCLIP15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 KCNMA1Q12791 1236 aa15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 KNOP1Q1ED39 458 aaKnown RBP15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 PCNX4Q63HM2 1172 aa15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 RRAGAQ7L523 313 aa15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 SPON1Q9HCB6 807 aa15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 COL11A1P12107 1806 aaPredicted RBP15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 ASTN1O14525 1302 aa15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 LRRC53A6NM62 1247 aa15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 USP2O75604 605 aaPredicted RBP15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 KIF20AO95235 890 aa15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 FGFR1OPO95684 399 aaKnown RBP15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 B3GNT9Q6UX72 402 aa15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 CARD6Q9BX69 1037 aa15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 EPC1Q9H2F5 836 aa15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 UBIAD1Q9Y5Z9 338 aa15.53■□□□□ 0.08
CARMIL3-203ENST00000560349 FAM170AA1A519 330 aa15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 ARHGEF35A5YM69 484 aa15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 RCCD1A6NED2 376 aa15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 USO1O60763 962 aaKnown RBP15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 AKAP3O75969 853 aa15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 ARHGAP25P42331 645 aa15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 HERVK_113P62684 666 aa15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 ARID5AQ03989 594 aa15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 EPHA7Q15375 998 aa15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 ODR4Q5SWX8 454 aa15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 TCERG1LQ5VWI1 586 aa15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 PLA2G4FQ68DD2 849 aa15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 EPM2AIP1Q7L775 607 aaPredicted RBP15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 NHEJ1Q9H9Q4 299 aaPredicted RBP15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 PCDHB13Q9Y5F0 798 aa15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 DUSP10Q9Y6W6 482 aa15.52■□□□□ 0.08
CARMIL3-203ENST00000560349 TISP43B9A030 160 aa15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 CCNE2O96020 404 aa15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 ACTN1P12814 892 aa15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 H2AFXP16104 143 aaPredicted RBP15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 ZBED6P86452 979 aa15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 KRT222Q8N1A0 295 aa15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 SLC35F6Q8N357 371 aa15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 REPS2Q8NFH8 660 aa15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 CLMNQ96JQ2 1002 aa15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 NACC1Q96RE7 527 aa15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 LSM14BQ9BX40 385 aaKnown RBP15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 PARVGQ9HBI0 331 aa15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 GPRC5CQ9NQ84 441 aa15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 JADE2Q9NQC1 790 aa15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 SNCAIPQ9Y6H5 919 aa15.52■□□□□ 0.07
CARMIL3-203ENST00000560349 CETN3O15182 167 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 HIP1RO75146 1068 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 TUBB4AP04350 444 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 DSG3P32926 999 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 GABPB1Q06547 395 aaPredicted RBP15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 FSTL1Q12841 308 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 TRIM59Q8IWR1 403 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 DAW1Q8N136 415 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 RIT2Q99578 217 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 R3HDMLQ9H3Y0 253 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 TMOD4Q9NZQ9 345 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 GOLGA6L9A6NEM1 432 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 SPDYE16A6NNV3 312 aaPredicted RBP15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 NR3C1P04150 777 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 NPEPPSP55786 919 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 FAM178BQ8IXR5 827 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 ZNHIT6Q9NWK9 470 aaKnown RBP15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 TCEAL9Q9UHQ7 104 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 AFG3L2Q9Y4W6 797 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 ZMYM2Q9UBW7 1377 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 FRMPD4Q14CM0 1322 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 KIF5CO60282 957 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 SOX10P56693 466 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 KCNH2Q12809 1159 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 PADI6Q6TGC4 694 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 CACNA2D4Q7Z3S7 1137 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 OTUD5Q96G74 571 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 LACRTQ9GZZ8 138 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 ELP3Q9H9T3 547 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 A1CFQ9NQ94 594 aaKnown RBP15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 ARHGAP20Q9P2F6 1191 aa15.51■□□□□ 0.07
CARMIL3-203ENST00000560349 ZNF263O14978 683 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 TGFB1I1O43294 461 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 NR3C2P08235 984 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 CYP2J2P51589 502 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 POLR2FP61218 127 aaKnown RBP15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 MEA1Q16626 185 aa15.5■□□□□ 0.07
CARMIL3-203ENST00000560349 CATSPERGQ6ZRH7 1159 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms