RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 H3BQV1 296 aa21.08■□□□□ 0.97
CASC4-209ENST00000559222 PITPNM1O00562 1244 aa21.08■□□□□ 0.97
CASC4-209ENST00000559222 SOX1O00570 391 aaPredicted RBP21.08■□□□□ 0.97
CASC4-209ENST00000559222 TBX3O15119 743 aa21.08■□□□□ 0.97
CASC4-209ENST00000559222 CTSHP09668 335 aa21.08■□□□□ 0.97
CASC4-209ENST00000559222 PRKCEQ02156 737 aa21.08■□□□□ 0.97
CASC4-209ENST00000559222 TMEM240Q5SV17 173 aa21.08■□□□□ 0.97
CASC4-209ENST00000559222 NCAPH2Q6IBW4 605 aa21.08■□□□□ 0.97
CASC4-209ENST00000559222 DEFB128Q7Z7B8 93 aa21.08■□□□□ 0.97
CASC4-209ENST00000559222 TDHQ8IZJ6 230 aa21.08■□□□□ 0.97
CASC4-209ENST00000559222 TMEM199Q8N511 208 aa21.08■□□□□ 0.97
CASC4-209ENST00000559222 CAGE1Q8TC20 777 aa21.08■□□□□ 0.97
CASC4-209ENST00000559222 TUBE1Q9UJT0 475 aa21.08■□□□□ 0.97
CASC4-209ENST00000559222 PCDHB6Q9Y5E3 794 aa21.08■□□□□ 0.97
CASC4-209ENST00000559222 STBD1O95210 358 aa21.07■□□□□ 0.96
CASC4-209ENST00000559222 SFNP31947 248 aa21.07■□□□□ 0.96
CASC4-209ENST00000559222 THPOP40225 353 aa21.07■□□□□ 0.96
CASC4-209ENST00000559222 PPIGQ13427 754 aaKnown RBP eCLIP21.07■□□□□ 0.96
CASC4-209ENST00000559222 BFSP2Q13515 415 aa21.07■□□□□ 0.96
CASC4-209ENST00000559222 LRRC8DQ7L1W4 858 aa21.07■□□□□ 0.96
CASC4-209ENST00000559222 HSCBQ8IWL3 235 aa21.07■□□□□ 0.96
CASC4-209ENST00000559222 CKAP2LQ8IYA6 745 aa21.07■□□□□ 0.96
CASC4-209ENST00000559222 IL23AQ9NPF7 189 aa21.07■□□□□ 0.96
CASC4-209ENST00000559222 GBF1Q92538 1859 aa21.07■□□□□ 0.96
CASC4-209ENST00000559222 MYH15Q9Y2K3 1946 aa21.06■□□□□ 0.96
CASC4-209ENST00000559222 VPS37CA5D8V6 355 aaPredicted RBP21.06■□□□□ 0.96
CASC4-209ENST00000559222 MARCH6O60337 910 aa21.06■□□□□ 0.96
CASC4-209ENST00000559222 NBNO60934 754 aa21.06■□□□□ 0.96
CASC4-209ENST00000559222 SELPP16109 830 aa21.06■□□□□ 0.96
CASC4-209ENST00000559222 TXKP42681 527 aa21.06■□□□□ 0.96
CASC4-209ENST00000559222 ZNF365Q70YC5 407 aa21.06■□□□□ 0.96
CASC4-209ENST00000559222 FERMT3Q86UX7 667 aa21.06■□□□□ 0.96
CASC4-209ENST00000559222 C4orf32Q8N8J7 132 aa21.06■□□□□ 0.96
CASC4-209ENST00000559222 RETREG2Q8NC44 543 aa21.06■□□□□ 0.96
CASC4-209ENST00000559222 INTS4Q96HW7 963 aaKnown RBP21.06■□□□□ 0.96
CASC4-209ENST00000559222 SH2D3AQ9BRG2 576 aa21.06■□□□□ 0.96
CASC4-209ENST00000559222 RGL1Q9NZL6 768 aa21.06■□□□□ 0.96
CASC4-209ENST00000559222 POTEMA6NI47 508 aa21.05■□□□□ 0.96
CASC4-209ENST00000559222 HBP1O60381 514 aa21.05■□□□□ 0.96
CASC4-209ENST00000559222 OATP04181 439 aa21.05■□□□□ 0.96
CASC4-209ENST00000559222 GNAT1P11488 350 aa21.05■□□□□ 0.96
CASC4-209ENST00000559222 SLC26A2P50443 739 aa21.05■□□□□ 0.96
CASC4-209ENST00000559222 SLFN12Q8IYM2 578 aa21.05■□□□□ 0.96
CASC4-209ENST00000559222 CCDC155Q8N6L0 562 aa21.05■□□□□ 0.96
CASC4-209ENST00000559222 SPRYD3Q8NCJ5 442 aa21.05■□□□□ 0.96
CASC4-209ENST00000559222 RDM1Q8NG50 284 aa21.05■□□□□ 0.96
CASC4-209ENST00000559222 DNAJB3Q8WWF6 145 aa21.05■□□□□ 0.96
CASC4-209ENST00000559222 FAM49AQ9H0Q0 323 aaPredicted RBP21.05■□□□□ 0.96
CASC4-209ENST00000559222 TTC12Q9H892 705 aaPredicted RBP21.05■□□□□ 0.96
CASC4-209ENST00000559222 NOL7Q9UMY1 257 aaKnown RBP21.05■□□□□ 0.96
CASC4-209ENST00000559222 BAG4O95429 457 aaKnown RBP21.04■□□□□ 0.96
CASC4-209ENST00000559222 SYT1P21579 422 aa21.04■□□□□ 0.96
CASC4-209ENST00000559222 MTHFD1LQ6UB35 978 aa21.04■□□□□ 0.96
CASC4-209ENST00000559222 BBXQ8WY36 941 aaPredicted RBP21.04■□□□□ 0.96
CASC4-209ENST00000559222 DYDC2Q96IM9 177 aa21.04■□□□□ 0.96
CASC4-209ENST00000559222 CXXC1Q9P0U4 656 aaPredicted RBP21.04■□□□□ 0.96
CASC4-209ENST00000559222 COL1A2P08123 1366 aa21.03■□□□□ 0.96
CASC4-209ENST00000559222 RRN3P2A6NIE6 340 aa21.03■□□□□ 0.96
CASC4-209ENST00000559222 C22orf31O95567 290 aa21.03■□□□□ 0.96
CASC4-209ENST00000559222 OR52Z1P0C646 297 aa21.03■□□□□ 0.96
CASC4-209ENST00000559222 KLRC1P26715 233 aa21.03■□□□□ 0.96
CASC4-209ENST00000559222 TRAPPC10P48553 1259 aa21.03■□□□□ 0.96
CASC4-209ENST00000559222 CYP4A11Q02928 519 aa21.03■□□□□ 0.96
CASC4-209ENST00000559222 TMEM62Q0P6H9 643 aa21.03■□□□□ 0.96
CASC4-209ENST00000559222 CTTNQ14247 550 aaKnown RBP21.03■□□□□ 0.96
CASC4-209ENST00000559222 PLA2G4FQ68DD2 849 aa21.03■□□□□ 0.96
CASC4-209ENST00000559222 FAM109BQ6ICB4 259 aaPredicted RBP21.03■□□□□ 0.96
CASC4-209ENST00000559222 OTOP2Q7RTS6 562 aa21.03■□□□□ 0.96
CASC4-209ENST00000559222 RNPC3Q96LT9 517 aaKnown RBP21.03■□□□□ 0.96
CASC4-209ENST00000559222 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.03■□□□□ 0.96
CASC4-209ENST00000559222 PCDHA12Q9UN75 941 aa21.03■□□□□ 0.96
CASC4-209ENST00000559222 A0A1W2PPC1 479 aa21.02■□□□□ 0.96
CASC4-209ENST00000559222 ZBTB39O15060 712 aa21.02■□□□□ 0.96
CASC4-209ENST00000559222 CHRNA1P02708 482 aa21.02■□□□□ 0.96
CASC4-209ENST00000559222 MGAT3Q09327 533 aa21.02■□□□□ 0.96
CASC4-209ENST00000559222 EPHA7Q15375 998 aa21.02■□□□□ 0.96
CASC4-209ENST00000559222 ZNF484Q5JVG2 852 aa21.02■□□□□ 0.96
CASC4-209ENST00000559222 ZNF579Q8NAF0 562 aaKnown RBP21.02■□□□□ 0.96
CASC4-209ENST00000559222 LRCH3Q96II8 777 aa21.02■□□□□ 0.96
CASC4-209ENST00000559222 CEP89Q96ST8 783 aa21.02■□□□□ 0.96
CASC4-209ENST00000559222 LXNQ9BS40 222 aa21.02■□□□□ 0.96
CASC4-209ENST00000559222 SEPT9Q9UHD8 586 aaPredicted RBP21.02■□□□□ 0.96
CASC4-209ENST00000559222 MTMR6Q9Y217 621 aa21.02■□□□□ 0.96
CASC4-209ENST00000559222 PCDHA2Q9Y5H9 948 aa21.02■□□□□ 0.96
CASC4-209ENST00000559222 MICAL3Q7RTP6 2002 aa21.02■□□□□ 0.96
CASC4-209ENST00000559222 RSPH10B2B2RC85 870 aa21.01■□□□□ 0.95
CASC4-209ENST00000559222 RSPH10BP0C881 870 aa21.01■□□□□ 0.95
CASC4-209ENST00000559222 TECP42680 631 aa21.01■□□□□ 0.95
CASC4-209ENST00000559222 FXR1P51114 621 aaKnown RBP eCLIP21.01■□□□□ 0.95
CASC4-209ENST00000559222 RESTQ13127 1097 aa21.01■□□□□ 0.95
CASC4-209ENST00000559222 PTGDRQ13258 359 aa21.01■□□□□ 0.95
CASC4-209ENST00000559222 IL17AQ16552 155 aa21.01■□□□□ 0.95
CASC4-209ENST00000559222 MTERF2Q49AM1 385 aa21.01■□□□□ 0.95
CASC4-209ENST00000559222 RASIP1Q5U651 963 aa21.01■□□□□ 0.95
CASC4-209ENST00000559222 FAM173BQ6P4H8 233 aa21.01■□□□□ 0.95
CASC4-209ENST00000559222 PSRC1Q6PGN9 363 aaPredicted RBP21.01■□□□□ 0.95
CASC4-209ENST00000559222 ANO5Q75V66 913 aa21.01■□□□□ 0.95
CASC4-209ENST00000559222 FAM167AQ96KS9 214 aa21.01■□□□□ 0.95
CASC4-209ENST00000559222 PPP1R16BQ96T49 567 aa21.01■□□□□ 0.95
CASC4-209ENST00000559222 EIF2AK1Q9BQI3 630 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms