RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CALCRLQ16602 461 aa14.07□□□□□ -0.16
SLIRP-209ENST00000557342 ZNF484Q5JVG2 852 aa14.07□□□□□ -0.16
SLIRP-209ENST00000557342 B3GNT9Q6UX72 402 aa14.07□□□□□ -0.16
SLIRP-209ENST00000557342 RPAINQ86UA6 219 aa14.07□□□□□ -0.16
SLIRP-209ENST00000557342 POTEDQ86YR6 584 aa14.07□□□□□ -0.16
SLIRP-209ENST00000557342 NOSTRINQ8IVI9 506 aa14.07□□□□□ -0.16
SLIRP-209ENST00000557342 TET1Q8NFU7 2136 aa14.07□□□□□ -0.16
SLIRP-209ENST00000557342 WNT8BQ93098 351 aa14.07□□□□□ -0.16
SLIRP-209ENST00000557342 GJA10Q969M2 543 aa14.07□□□□□ -0.16
SLIRP-209ENST00000557342 FTOQ9C0B1 505 aaKnown RBP eCLIP14.07□□□□□ -0.16
SLIRP-209ENST00000557342 NRBP2Q9NSY0 501 aa14.07□□□□□ -0.16
SLIRP-209ENST00000557342 NOL7Q9UMY1 257 aaKnown RBP14.07□□□□□ -0.16
SLIRP-209ENST00000557342 PCDHA2Q9Y5H9 948 aa14.07□□□□□ -0.16
SLIRP-209ENST00000557342 SIP14410 1827 aa14.06□□□□□ -0.16
SLIRP-209ENST00000557342 GBF1Q92538 1859 aa14.06□□□□□ -0.16
SLIRP-209ENST00000557342 H3BQV1 296 aa14.06□□□□□ -0.16
SLIRP-209ENST00000557342 NEMFO60524 1076 aa14.06□□□□□ -0.16
SLIRP-209ENST00000557342 DKC1O60832 514 aaKnown RBP eCLIP14.06□□□□□ -0.16
SLIRP-209ENST00000557342 TRAPPC10P48553 1259 aa14.06□□□□□ -0.16
SLIRP-209ENST00000557342 CUL4AQ13619 759 aa14.06□□□□□ -0.16
SLIRP-209ENST00000557342 MARCH8Q5T0T0 291 aa14.06□□□□□ -0.16
SLIRP-209ENST00000557342 GPR153Q6NV75 609 aa14.06□□□□□ -0.16
SLIRP-209ENST00000557342 HAS1Q92839 578 aa14.06□□□□□ -0.16
SLIRP-209ENST00000557342 VAV3Q9UKW4 847 aa14.06□□□□□ -0.16
SLIRP-209ENST00000557342 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.05□□□□□ -0.16
SLIRP-209ENST00000557342 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.05□□□□□ -0.16
SLIRP-209ENST00000557342 CXCL10P02778 98 aa14.05□□□□□ -0.16
SLIRP-209ENST00000557342 OATP04181 439 aa14.05□□□□□ -0.16
SLIRP-209ENST00000557342 ATP2B1P20020 1258 aa14.05□□□□□ -0.16
SLIRP-209ENST00000557342 ATP4AP20648 1035 aa14.05□□□□□ -0.16
SLIRP-209ENST00000557342 U2AF2P26368 475 aaKnown RBP eCLIP14.05□□□□□ -0.161e-7■□□□□ 8
SLIRP-209ENST00000557342 SMAD3P84022 425 aaKnown RBP14.05□□□□□ -0.16
SLIRP-209ENST00000557342 FAM26DQ5JW98 314 aa14.05□□□□□ -0.16
SLIRP-209ENST00000557342 RASIP1Q5U651 963 aa14.05□□□□□ -0.16
SLIRP-209ENST00000557342 TRAF7Q6Q0C0 670 aa14.05□□□□□ -0.16
SLIRP-209ENST00000557342 MTHFD1LQ6UB35 978 aa14.05□□□□□ -0.16
SLIRP-209ENST00000557342 OTOP2Q7RTS6 562 aa14.05□□□□□ -0.16
SLIRP-209ENST00000557342 PCDHA12Q9UN75 941 aa14.05□□□□□ -0.16
SLIRP-209ENST00000557342 MICAL3Q7RTP6 2002 aa14.05□□□□□ -0.16
SLIRP-209ENST00000557342 SMIM35A0A1B0GVV1 85 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 ZBBXA8MT70 800 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 M0QZ92 97 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 SOX1O00570 391 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-209ENST00000557342 MAGEB2O15479 319 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 NBNO60934 754 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 BAIAP3O94812 1187 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 P4HBP07237 508 aaKnown RBP14.04□□□□□ -0.16
SLIRP-209ENST00000557342 KLRC1P26715 233 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 MCM7P33993 719 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 PSMC5P62195 406 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 PRKCEQ02156 737 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 EPHA7Q15375 998 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 IER5Q5VY09 327 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 LARP1BQ659C4 914 aaKnown RBP14.04□□□□□ -0.16
SLIRP-209ENST00000557342 CNKSR3Q6P9H4 555 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 RUFY4Q6ZNE9 571 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 NME8Q8N427 588 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 TRAPPC12Q8WVT3 735 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 DNAJB3Q8WWF6 145 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 VWCEQ96DN2 955 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 SLC4A7Q9Y6M7 1214 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 ARID2Q68CP9 1835 aa14.04□□□□□ -0.16
SLIRP-209ENST00000557342 KIF28PB7ZC32 967 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 K7ELQ4 463 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-209ENST00000557342 EML1O00423 815 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 ZNF862O60290 1169 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 EFCAB14O75071 495 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 CTSHP09668 335 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 TXKP42681 527 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 QARSP47897 775 aaKnown RBP14.03□□□□□ -0.16
SLIRP-209ENST00000557342 GPNMBQ14956 572 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 UGCGQ16739 394 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 XKR3Q5GH77 459 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 TTC38Q5R3I4 469 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 MCTP1Q6DN14 999 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 NCAPH2Q6IBW4 605 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 TRMT1LQ7Z2T5 733 aaKnown RBP14.03□□□□□ -0.16
SLIRP-209ENST00000557342 SNX21Q969T3 373 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 INTS4Q96HW7 963 aaKnown RBP14.03□□□□□ -0.16
SLIRP-209ENST00000557342 LRCH3Q96II8 777 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 MTMR9Q96QG7 549 aa14.03□□□□□ -0.16
SLIRP-209ENST00000557342 TTC12Q9H892 705 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-209ENST00000557342 PTPRSQ13332 1948 aa14.02□□□□□ -0.16
SLIRP-209ENST00000557342 ABHD14A-ACY1A0A1B0GW23 586 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 ZBTB42B2RXF5 422 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 WNT7AO00755 349 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 CHRNA1P02708 482 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 PDCP20941 246 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 MRPS6P82932 125 aaKnown RBP14.02□□□□□ -0.17
SLIRP-209ENST00000557342 SPIRE1Q08AE8 756 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 MGAT3Q09327 533 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 IKBKEQ14164 716 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 MBTPS1Q14703 1052 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 ZNF174Q15697 407 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 PLEKHG4Q58EX7 1191 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 BANK1Q8NDB2 785 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 PHOSPHO2Q8TCD6 241 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 NEK9Q8TD19 979 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 SEPT8Q92599 483 aa14.02□□□□□ -0.17
SLIRP-209ENST00000557342 APBB2Q92870 758 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms