RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 HAS1Q92839 578 aa25.79■■□□□ 1.72
TDP1-216ENST00000556867 COL1A2P08123 1366 aa25.79■■□□□ 1.72
TDP1-216ENST00000556867 RSPH10B2B2RC85 870 aa25.78■■□□□ 1.72
TDP1-216ENST00000556867 NBNO60934 754 aa25.78■■□□□ 1.72
TDP1-216ENST00000556867 RSPH10BP0C881 870 aa25.78■■□□□ 1.72
TDP1-216ENST00000556867 SMAD3P84022 425 aaKnown RBP25.78■■□□□ 1.72
TDP1-216ENST00000556867 PPP2R5CQ13362 524 aa25.78■■□□□ 1.72
TDP1-216ENST00000556867 MBTPS1Q14703 1052 aa25.78■■□□□ 1.72
TDP1-216ENST00000556867 MIER3Q7Z3K6 550 aa25.78■■□□□ 1.72
TDP1-216ENST00000556867 CXXC1Q9P0U4 656 aaPredicted RBP25.78■■□□□ 1.72
TDP1-216ENST00000556867 VAV3Q9UKW4 847 aa25.78■■□□□ 1.72
TDP1-216ENST00000556867 ACTN1P12814 892 aa25.77■■□□□ 1.72
TDP1-216ENST00000556867 FAM26DQ5JW98 314 aa25.77■■□□□ 1.72
TDP1-216ENST00000556867 CKAP2LQ8IYA6 745 aa25.77■■□□□ 1.72
TDP1-216ENST00000556867 TRAPPC12Q8WVT3 735 aa25.77■■□□□ 1.72
TDP1-216ENST00000556867 BBXQ8WY36 941 aaPredicted RBP25.77■■□□□ 1.72
TDP1-216ENST00000556867 FAM167AQ96KS9 214 aa25.77■■□□□ 1.72
TDP1-216ENST00000556867 FTOQ9C0B1 505 aaKnown RBP eCLIP25.77■■□□□ 1.72
TDP1-216ENST00000556867 WNT7AO00755 349 aa25.76■■□□□ 1.71
TDP1-216ENST00000556867 ZNF862O60290 1169 aa25.76■■□□□ 1.71
TDP1-216ENST00000556867 RPLP2P05387 115 aaKnown RBP25.76■■□□□ 1.71
TDP1-216ENST00000556867 UGCGQ16739 394 aa25.76■■□□□ 1.71
TDP1-216ENST00000556867 ZNF484Q5JVG2 852 aa25.76■■□□□ 1.71
TDP1-216ENST00000556867 SLFN12Q8IYM2 578 aa25.76■■□□□ 1.71
TDP1-216ENST00000556867 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.76■■□□□ 1.71
TDP1-216ENST00000556867 PCDHA2Q9Y5H9 948 aa25.76■■□□□ 1.71
TDP1-216ENST00000556867 SIP14410 1827 aa25.75■■□□□ 1.71
TDP1-216ENST00000556867 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.75■■□□□ 1.71
TDP1-216ENST00000556867 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.75■■□□□ 1.71
TDP1-216ENST00000556867 ZBTB42B2RXF5 422 aa25.75■■□□□ 1.71
TDP1-216ENST00000556867 CTSHP09668 335 aa25.75■■□□□ 1.71
TDP1-216ENST00000556867 GJB2P29033 226 aa25.75■■□□□ 1.71
TDP1-216ENST00000556867 RSPH3Q86UC2 560 aa25.75■■□□□ 1.71
TDP1-216ENST00000556867 NOSTRINQ8IVI9 506 aa25.75■■□□□ 1.71
TDP1-216ENST00000556867 ZBTB10Q96DT7 871 aa25.75■■□□□ 1.71
TDP1-216ENST00000556867 MARCH6O60337 910 aa25.74■■□□□ 1.71
TDP1-216ENST00000556867 NEMFO60524 1076 aa25.74■■□□□ 1.71
TDP1-216ENST00000556867 BAIAP3O94812 1187 aa25.74■■□□□ 1.71
TDP1-216ENST00000556867 BAG4O95429 457 aaKnown RBP25.74■■□□□ 1.71
TDP1-216ENST00000556867 U2AF2P26368 475 aaKnown RBP eCLIP25.74■■□□□ 1.71
TDP1-216ENST00000556867 PRKCEQ02156 737 aa25.74■■□□□ 1.71
TDP1-216ENST00000556867 CUL4AQ13619 759 aa25.74■■□□□ 1.71
TDP1-216ENST00000556867 GNL2Q13823 731 aaKnown RBP25.74■■□□□ 1.71
TDP1-216ENST00000556867 CALCRLQ16602 461 aa25.74■■□□□ 1.71
TDP1-216ENST00000556867 CNKSR3Q6P9H4 555 aa25.74■■□□□ 1.71
TDP1-216ENST00000556867 MTHFD1LQ6UB35 978 aa25.74■■□□□ 1.71
TDP1-216ENST00000556867 SMC3Q9UQE7 1217 aa25.74■■□□□ 1.71
TDP1-216ENST00000556867 EVPLQ92817 2033 aa25.73■■□□□ 1.71
TDP1-216ENST00000556867 SMIM35A0A1B0GVV1 85 aa25.73■■□□□ 1.71
TDP1-216ENST00000556867 ZBBXA8MT70 800 aa25.73■■□□□ 1.71
TDP1-216ENST00000556867 KIF28PB7ZC32 967 aa25.73■■□□□ 1.71
TDP1-216ENST00000556867 EML1O00423 815 aa25.73■■□□□ 1.71
TDP1-216ENST00000556867 OATP04181 439 aa25.73■■□□□ 1.71
TDP1-216ENST00000556867 KLRC1P26715 233 aa25.73■■□□□ 1.71
TDP1-216ENST00000556867 SPIRE1Q08AE8 756 aa25.73■■□□□ 1.71
TDP1-216ENST00000556867 ORC2Q13416 577 aaPredicted RBP25.73■■□□□ 1.71
TDP1-216ENST00000556867 FAM109BQ6ICB4 259 aaPredicted RBP25.73■■□□□ 1.71
TDP1-216ENST00000556867 DNAJB3Q8WWF6 145 aa25.73■■□□□ 1.71
TDP1-216ENST00000556867 CEP131Q9UPN4 1083 aa25.73■■□□□ 1.71
TDP1-216ENST00000556867 SLC4A7Q9Y6M7 1214 aa25.73■■□□□ 1.71
TDP1-216ENST00000556867 CHRNA1P02708 482 aa25.72■■□□□ 1.71
TDP1-216ENST00000556867 TRAPPC10P48553 1259 aa25.72■■□□□ 1.71
TDP1-216ENST00000556867 MGAT3Q09327 533 aa25.72■■□□□ 1.71
TDP1-216ENST00000556867 C22orf31O95567 290 aa25.71■■□□□ 1.71
TDP1-216ENST00000556867 MRPS6P82932 125 aaKnown RBP25.71■■□□□ 1.71
TDP1-216ENST00000556867 MTMR9Q96QG7 549 aa25.71■■□□□ 1.71
TDP1-216ENST00000556867 FAM49AQ9H0Q0 323 aaPredicted RBP25.71■■□□□ 1.71
TDP1-216ENST00000556867 NRBP2Q9NSY0 501 aa25.71■■□□□ 1.71
TDP1-216ENST00000556867 GBF1Q92538 1859 aa25.7■■□□□ 1.71
TDP1-216ENST00000556867 MICAL3Q7RTP6 2002 aa25.7■■□□□ 1.7
TDP1-216ENST00000556867 ATP2B1P20020 1258 aa25.7■■□□□ 1.7
TDP1-216ENST00000556867 MCM7P33993 719 aa25.7■■□□□ 1.7
TDP1-216ENST00000556867 PSMC5P62195 406 aa25.7■■□□□ 1.7
TDP1-216ENST00000556867 TCTN1Q2MV58 587 aa25.7■■□□□ 1.7
TDP1-216ENST00000556867 PLEKHG4Q58EX7 1191 aa25.7■■□□□ 1.7
TDP1-216ENST00000556867 TRMT1LQ7Z2T5 733 aaKnown RBP25.7■■□□□ 1.7
TDP1-216ENST00000556867 NOL7Q9UMY1 257 aaKnown RBP25.7■■□□□ 1.7
TDP1-216ENST00000556867 ABHD14A-ACY1A0A1B0GW23 586 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 GRXCR1A8MXD5 290 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 STBD1O95210 358 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 EPHA7Q15375 998 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 XKR3Q5GH77 459 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 TTC38Q5R3I4 469 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 NME8Q8N427 588 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 BANK1Q8NDB2 785 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 SLC9A7Q96T83 725 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 OSBPL7Q9BZF2 842 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 TMEM60Q9H2L4 133 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 PCDHA12Q9UN75 941 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 CDY2AQ9Y6F7 541 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 PTPRSQ13332 1948 aa25.69■■□□□ 1.7
TDP1-216ENST00000556867 MAGEB2O15479 319 aa25.68■■□□□ 1.7
TDP1-216ENST00000556867 EFCAB14O75071 495 aa25.68■■□□□ 1.7
TDP1-216ENST00000556867 ATP2A2P16615 1042 aaKnown RBP25.68■■□□□ 1.7
TDP1-216ENST00000556867 DNAJB2P25686 324 aa25.68■■□□□ 1.7
TDP1-216ENST00000556867 QARSP47897 775 aaKnown RBP25.68■■□□□ 1.7
TDP1-216ENST00000556867 IKBKEQ14164 716 aa25.68■■□□□ 1.7
TDP1-216ENST00000556867 TARBP2Q15633 366 aaKnown RBP25.68■■□□□ 1.7
TDP1-216ENST00000556867 IER5Q5VY09 327 aa25.68■■□□□ 1.7
TDP1-216ENST00000556867 NCAPH2Q6IBW4 605 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms