RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 DONSONQ9NYP3 566 aa18.14■□□□□ 0.5
PCNX1-209ENST00000554879 GINS2Q9Y248 185 aa18.14■□□□□ 0.5
PCNX1-209ENST00000554879 PLIN4Q96Q06 1357 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 MACROD2A1Z1Q3 448 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 C19orf81C9J6K1 198 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 ZEB2O60315 1214 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 GOLGA1Q92805 767 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 HAS1Q92839 578 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 PURBQ96QR8 312 aaKnown RBP18.14■□□□□ 0.49
PCNX1-209ENST00000554879 AZI2Q9H6S1 392 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 SUGCTQ9HAC7 445 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 C4AP0C0L4 1744 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 XRCC5P13010 732 aaKnown RBP18.14■□□□□ 0.49
PCNX1-209ENST00000554879 PSMC6P62333 389 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 NAALADL2Q58DX5 795 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 SYT17Q9BSW7 474 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 LSM14BQ9BX40 385 aaKnown RBP18.14■□□□□ 0.49
PCNX1-209ENST00000554879 PTPRAP18433 802 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 MAP2K1Q02750 393 aaPredicted RBP18.14■□□□□ 0.49
PCNX1-209ENST00000554879 CCDC122Q5T0U0 273 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 OTUD6AQ7L8S5 288 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 GIMAP8Q8ND71 665 aaPredicted RBP18.14■□□□□ 0.49
PCNX1-209ENST00000554879 EXOC4Q96A65 974 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 IFT74Q96LB3 600 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 PNMA5Q96PV4 448 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 MTMR9Q96QG7 549 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 THAP9Q9H5L6 903 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 PPP2R2CQ9Y2T4 447 aa18.14■□□□□ 0.49
PCNX1-209ENST00000554879 FBXW10Q5XX13 1052 aa18.13■□□□□ 0.49
PCNX1-209ENST00000554879 HDXQ7Z353 690 aa18.13■□□□□ 0.49
PCNX1-209ENST00000554879 VPS36Q86VN1 386 aa18.13■□□□□ 0.49
PCNX1-209ENST00000554879 TMTC1Q8IUR5 882 aa18.13■□□□□ 0.49
PCNX1-209ENST00000554879 C10orf71Q711Q0 1435 aa18.13■□□□□ 0.49
PCNX1-209ENST00000554879 KIF1CO43896 1103 aaKnown RBP18.13■□□□□ 0.49
PCNX1-209ENST00000554879 NR3C2P08235 984 aa18.13■□□□□ 0.49
PCNX1-209ENST00000554879 MTERF2Q49AM1 385 aa18.13■□□□□ 0.49
PCNX1-209ENST00000554879 MUM1L1Q5H9M0 696 aa18.13■□□□□ 0.49
PCNX1-209ENST00000554879 EZRP15311 586 aaKnown RBP18.13■□□□□ 0.49
PCNX1-209ENST00000554879 PSMD2Q13200 908 aa18.13■□□□□ 0.49
PCNX1-209ENST00000554879 REEP2Q9BRK0 252 aa18.13■□□□□ 0.49
PCNX1-209ENST00000554879 TBC1D12O60347 775 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 ZFYVE27Q5T4F4 411 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 CCDC181Q5TID7 509 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 TADA2BQ86TJ2 420 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 MXRA8Q9BRK3 442 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 JADE2Q9NQC1 790 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 CCDC70Q6NSX1 233 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 PADI6Q6TGC4 694 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 ELOA2Q8IYF1 753 aaPredicted RBP18.12■□□□□ 0.49
PCNX1-209ENST00000554879 RNF217Q8TC41 542 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 POLR2FP61218 127 aaKnown RBP18.12■□□□□ 0.49
PCNX1-209ENST00000554879 KIF5AQ12840 1032 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 CCDC127Q96BQ5 260 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 NDST4Q9H3R1 872 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 TAF1LQ8IZX4 1826 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 LY75O60449 1722 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 TBX3O15119 743 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 RPA1P27694 616 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 NMT1P30419 496 aaKnown RBP18.12■□□□□ 0.49
PCNX1-209ENST00000554879 EPHX2P34913 555 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 FMNL3Q8IVF7 1028 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 NUP58Q9BVL2 599 aa18.12■□□□□ 0.49
PCNX1-209ENST00000554879 DKC1O60832 514 aaKnown RBP eCLIP18.11■□□□□ 0.49
PCNX1-209ENST00000554879 OSBPP22059 807 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 PMS1P54277 932 aaKnown RBP18.11■□□□□ 0.49
PCNX1-209ENST00000554879 SH3RF1Q7Z6J0 888 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 EFCAB13Q8IY85 973 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 GUF1Q8N442 669 aaKnown RBP18.11■□□□□ 0.49
PCNX1-209ENST00000554879 MB21D1Q8N884 522 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 MTRQ99707 1265 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 SBF2Q86WG5 1849 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 RSPH10B2B2RC85 870 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 STX10O60499 249 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 RSPH10BP0C881 870 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 MARK3P27448 753 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 NAIF1Q69YI7 327 aaPredicted RBP18.11■□□□□ 0.49
PCNX1-209ENST00000554879 SWSAP1Q6NVH7 229 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 RBM46Q8TBY0 533 aaKnown RBP18.11■□□□□ 0.49
PCNX1-209ENST00000554879 BLOC1S4Q9NUP1 217 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 ODF2LQ9ULJ1 636 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 PEX3P56589 373 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 KRT83P78385 493 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 MAN2A1Q16706 1144 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 MAP1SQ66K74 1059 aaPredicted RBP18.11■□□□□ 0.49
PCNX1-209ENST00000554879 CNKSR2Q8WXI2 1034 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 ATP6V0A1Q93050 837 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 PPP1R13BQ96KQ4 1090 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 GABBR1Q9UBS5 961 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 ADD3Q9UEY8 706 aaKnown RBP18.11■□□□□ 0.49
PCNX1-209ENST00000554879 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.11■□□□□ 0.49
PCNX1-209ENST00000554879 FHOD1Q9Y613 1164 aa18.11■□□□□ 0.49
PCNX1-209ENST00000554879 ATRNL1Q5VV63 1379 aa18.1■□□□□ 0.49
PCNX1-209ENST00000554879 ZBTB39O15060 712 aa18.1■□□□□ 0.49
PCNX1-209ENST00000554879 POLGP54098 1239 aaPredicted RBP18.1■□□□□ 0.49
PCNX1-209ENST00000554879 LRRC63Q05C16 580 aa18.1■□□□□ 0.49
PCNX1-209ENST00000554879 E2F5Q15329 346 aa18.1■□□□□ 0.49
PCNX1-209ENST00000554879 GBP3Q9H0R5 595 aa18.1■□□□□ 0.49
PCNX1-209ENST00000554879 A0A087WUV0 522 aaPredicted RBP18.1■□□□□ 0.49
PCNX1-209ENST00000554879 QARSP47897 775 aaKnown RBP18.1■□□□□ 0.49
PCNX1-209ENST00000554879 LONRF2Q1L5Z9 754 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms