RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 STAM2O75886 525 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 ASGR2P07307 311 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 POLR2MP0CAP2 368 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 STAG3L1P0CL83 205 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 NPR3P17342 541 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 HOXB8P17481 243 aaPredicted RBP11.13□□□□□ -0.63
CHD8-205ENST00000553651 TCF7P36402 384 aaPredicted RBP11.13□□□□□ -0.63
CHD8-205ENST00000553651 APOBRQ0VD83 1088 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 NMIQ13287 307 aaPredicted RBP11.13□□□□□ -0.63
CHD8-205ENST00000553651 GNPTABQ3T906 1256 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 CCDC178Q5BJE1 867 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 PDE12Q6L8Q7 609 aaKnown RBP11.13□□□□□ -0.63
CHD8-205ENST00000553651 RSPH3Q86UC2 560 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 COLGALT1Q8NBJ5 622 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 RNF41Q9H4P4 317 aaPredicted RBP11.13□□□□□ -0.63
CHD8-205ENST00000553651 CWH43Q9H720 699 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 RTEL1Q9NZ71 1219 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 ZSWIM5Q9P217 1185 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 CHD6Q8TD26 2715 aa11.13□□□□□ -0.63
CHD8-205ENST00000553651 PALM3A6NDB9 673 aaPredicted RBP11.12□□□□□ -0.63
CHD8-205ENST00000553651 HIDE1A8MVS5 230 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 TRIM6-TRIM34B2RNG4 842 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 B4E1Z4 1266 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 ATP9AO75110 1047 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 SARSP49591 514 aaKnown RBP11.12□□□□□ -0.63
CHD8-205ENST00000553651 NT5C2P49902 561 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 SP4Q02446 784 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 SEC23AQ15436 765 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 LLGL2Q6P1M3 1020 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 IQCA1Q86XH1 822 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 CCDC105Q8IYK2 499 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 PCYT2Q99447 389 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 RIOX1Q9H6W3 641 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 TYW1Q9NV66 732 aaKnown RBP11.12□□□□□ -0.63
CHD8-205ENST00000553651 TMEM260Q9NX78 707 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 LZTS1Q9Y250 596 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 NR2E1Q9Y466 385 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 PCDHB12Q9Y5F1 795 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 TRPV2Q9Y5S1 764 aa11.12□□□□□ -0.63
CHD8-205ENST00000553651 KDM3AQ9Y4C1 1321 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 CACNA1GO43497 2377 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 CYTH3O43739 400 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 KCNA2P16389 499 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 MARK3P27448 753 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 PLCB3Q01970 1234 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 FAM102BQ5T8I3 360 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 PLPP4Q5VZY2 271 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 ZDHHC14Q8IZN3 488 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 FEZF2Q8TBJ5 459 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 MRPS27Q92552 414 aaKnown RBP11.11□□□□□ -0.63
CHD8-205ENST00000553651 PIGSQ96S52 555 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 FAM49AQ9H0Q0 323 aaPredicted RBP11.11□□□□□ -0.63
CHD8-205ENST00000553651 ADAM7Q9H2U9 754 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 ERVK-5Q9HDB9 667 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 TSHZ2Q9NRE2 1034 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 PCDHB15Q9Y5E8 787 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 CFAP47Q6ZTR5 3102 aa11.11□□□□□ -0.63
CHD8-205ENST00000553651 DENND4AQ7Z401 1863 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 TBKBP1A7MCY6 615 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 C9IYK1 514 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 INSRRP14616 1297 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 AOC1P19801 751 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 TMEM62Q0P6H9 643 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 PAK2Q13177 524 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 ANGPT1Q15389 498 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 TMEM266Q2M3C6 531 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 IER5Q5VY09 327 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 PCNX4Q63HM2 1172 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 LRRC55Q6ZSA7 311 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 DGLUCYQ7Z3D6 616 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 THNSL1Q8IYQ7 743 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 SEPT1Q8WYJ6 367 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 CELF4Q9BZC1 486 aaKnown RBP11.1□□□□□ -0.63
CHD8-205ENST00000553651 AAASQ9NRG9 546 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 RNF19AQ9NV58 838 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 ERAP1Q9NZ08 941 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 LIMD1Q9UGP4 676 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 HCFC2Q9Y5Z7 792 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 ZFHX4Q86UP3 3567 aa11.1□□□□□ -0.63
CHD8-205ENST00000553651 MAP1BP46821 2468 aaKnown RBP11.1□□□□□ -0.63
CHD8-205ENST00000553651 FANCMQ8IYD8 2048 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 CHD8Q9HCK8 2581 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 RRN3P2A6NIE6 340 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 ZNF213O14771 459 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 RPLP2P05387 115 aaKnown RBP11.09□□□□□ -0.63
CHD8-205ENST00000553651 WEE2P0C1S8 567 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 SRGAP2BP0DMP2 458 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 PDE1AP54750 535 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 IGBP1P78318 339 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 FAM189BP81408 668 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 ITIH3Q06033 890 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 HOMER1Q86YM7 354 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 DTWD2Q8NBA8 298 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 TRAPPC12Q8WVT3 735 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 TMEM40Q8WWA1 233 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 CASP10Q92851 521 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 CNTNAP3BQ96NU0 1288 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 NECTIN4Q96NY8 510 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 TCF25Q9BQ70 676 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms