RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 GRIK4Q16099 956 aa21.08■□□□□ 0.97
CTDSP2-207ENST00000551594 PTGISQ16647 500 aa21.08■□□□□ 0.97
CTDSP2-207ENST00000551594 ARL6IP4Q66PJ3 421 aaKnown RBP21.08■□□□□ 0.97
CTDSP2-207ENST00000551594 SH3RF1Q7Z6J0 888 aa21.08■□□□□ 0.97
CTDSP2-207ENST00000551594 TPH2Q8IWU9 490 aa21.08■□□□□ 0.97
CTDSP2-207ENST00000551594 LMBR1Q8WVP7 490 aa21.08■□□□□ 0.97
CTDSP2-207ENST00000551594 ATP6V0A1Q93050 837 aa21.08■□□□□ 0.97
CTDSP2-207ENST00000551594 ZBTB10Q96DT7 871 aa21.08■□□□□ 0.97
CTDSP2-207ENST00000551594 CTAGE1Q96RT6 745 aa21.08■□□□□ 0.97
CTDSP2-207ENST00000551594 LXNQ9BS40 222 aa21.08■□□□□ 0.97
CTDSP2-207ENST00000551594 TCHHQ07283 1943 aa21.08■□□□□ 0.96
CTDSP2-207ENST00000551594 A0A087WWV3 80 aa21.07■□□□□ 0.96
CTDSP2-207ENST00000551594 TLR3O15455 904 aaKnown RBP21.07■□□□□ 0.96
CTDSP2-207ENST00000551594 MED24O75448 989 aa21.07■□□□□ 0.96
CTDSP2-207ENST00000551594 OATP04181 439 aa21.07■□□□□ 0.96
CTDSP2-207ENST00000551594 CYP2C9P11712 490 aa21.07■□□□□ 0.96
CTDSP2-207ENST00000551594 HOXC8P31273 242 aa21.07■□□□□ 0.96
CTDSP2-207ENST00000551594 NASPP49321 788 aaPredicted RBP21.07■□□□□ 0.96
CTDSP2-207ENST00000551594 NUCB2P80303 420 aa21.07■□□□□ 0.96
CTDSP2-207ENST00000551594 MLLT1Q03111 559 aaPredicted RBP21.07■□□□□ 0.96
CTDSP2-207ENST00000551594 PDIA5Q14554 519 aa21.07■□□□□ 0.96
CTDSP2-207ENST00000551594 SLC39A14Q15043 492 aa21.07■□□□□ 0.96
CTDSP2-207ENST00000551594 PRDM5Q9NQX1 630 aaPredicted RBP21.07■□□□□ 0.96
CTDSP2-207ENST00000551594 PDE4DIPQ5VU43 2346 aa21.07■□□□□ 0.96
CTDSP2-207ENST00000551594 DDX11L8A8MPP1 907 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 ZBTB42B2RXF5 422 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 ZBTB39O15060 712 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 TREHO43280 583 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 HBP1O60381 514 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 CLTBP09497 229 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 SPATA31C1P0DKV0 1188 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 STK38Q15208 465 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 MARCH8Q5T0T0 291 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 LINC00301Q8NCQ3 95 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 BBXQ8WY36 941 aaPredicted RBP21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 CLIC6Q96NY7 704 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 SH2D3AQ9BRG2 576 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 PDLIM7Q9NR12 457 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 NRBP2Q9NSY0 501 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 FBXO2Q9UK22 296 aaPredicted RBP21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 CEP290O15078 2479 aa21.06■□□□□ 0.96
CTDSP2-207ENST00000551594 NRCAMQ92823 1304 aa21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 TRIM43BA6NCK2 446 aa21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 SYN1P17600 705 aa21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 ADAM17P78536 824 aa21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 XKR3Q5GH77 459 aa21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 CATSPER3Q86XQ3 398 aa21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 ERMNQ8TAM6 284 aa21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 TRIM43Q96BQ3 446 aaPredicted RBP21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 FAM167AQ96KS9 214 aa21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 IPO9Q96P70 1041 aaKnown RBP21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 RAB34Q9BZG1 259 aa21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 ZSWIM4Q9H7M6 989 aa21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 TMEM39AQ9NV64 488 aa21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 SEPT9Q9UHD8 586 aaPredicted RBP21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 ZMYND8Q9ULU4 1186 aaPredicted RBP21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 NOD1Q9Y239 953 aa21.05■□□□□ 0.96
CTDSP2-207ENST00000551594 EVPLQ92817 2033 aa21.04■□□□□ 0.96
CTDSP2-207ENST00000551594 CCT6AP40227 531 aaKnown RBP21.04■□□□□ 0.96
CTDSP2-207ENST00000551594 ECM1Q16610 540 aa21.04■□□□□ 0.96
CTDSP2-207ENST00000551594 ZNF484Q5JVG2 852 aa21.04■□□□□ 0.96
CTDSP2-207ENST00000551594 PLA2G4FQ68DD2 849 aa21.04■□□□□ 0.96
CTDSP2-207ENST00000551594 ANO5Q75V66 913 aa21.04■□□□□ 0.96
CTDSP2-207ENST00000551594 NEK9Q8TD19 979 aa21.04■□□□□ 0.96
CTDSP2-207ENST00000551594 WNT8BQ93098 351 aa21.04■□□□□ 0.96
CTDSP2-207ENST00000551594 MMTAG2Q9BU76 263 aaKnown RBP21.04■□□□□ 0.96
CTDSP2-207ENST00000551594 POLR3CQ9BUI4 534 aaPredicted RBP21.04■□□□□ 0.96
CTDSP2-207ENST00000551594 SRPRBQ9Y5M8 271 aaKnown RBP21.04■□□□□ 0.96
CTDSP2-207ENST00000551594 RRN3P2A6NIE6 340 aa21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 SPTLC2O15270 562 aa21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 GNAT1P11488 350 aa21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 NCLP19338 710 aaKnown RBP21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 ITGB8P26012 769 aa21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 MTERF2Q49AM1 385 aa21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 SPECC1Q5M775 1068 aa21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 RUFY4Q6ZNE9 571 aa21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 C4orf19Q8IY42 314 aa21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 ZNF579Q8NAF0 562 aaKnown RBP21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 SNX29Q8TEQ0 813 aa21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 PIGOQ8TEQ8 1089 aa21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 DHX38Q92620 1227 aaKnown RBP21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 CSRNP2Q9H175 543 aa21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 TUFT1Q9NNX1 390 aa21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 TBX21Q9UL17 535 aa21.03■□□□□ 0.96
CTDSP2-207ENST00000551594 RBAK-RBAKDNI3L0D1 243 aa21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 DKC1O60832 514 aaKnown RBP eCLIP21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 YEATS4O95619 227 aa21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 RPA1P27694 616 aa21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 YWHABP31946 246 aaKnown RBP21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 LONP1P36776 959 aaKnown RBP21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 NPEPPSP55786 919 aa21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 ZRSR1Q15695 479 aaKnown RBP21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 KRT79Q5XKE5 535 aa21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 ATL3Q6DD88 541 aa21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 POTEGQ6S5H5 508 aa21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 MTHFD1LQ6UB35 978 aa21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 SERINC5Q86VE9 423 aa21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 TNPO1Q92973 898 aaKnown RBP21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 NIFKQ9BYG3 293 aaKnown RBP21.02■□□□□ 0.96
CTDSP2-207ENST00000551594 PPP1R12CQ9BZL4 782 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms