RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 PTPN11Q06124 597 aaPredicted RBP23.4■■□□□ 1.34
GPN3-205ENST00000547323 FAAP100Q0VG06 881 aa23.4■■□□□ 1.34
GPN3-205ENST00000547323 STK38Q15208 465 aa23.4■■□□□ 1.34
GPN3-205ENST00000547323 LINC00301Q8NCQ3 95 aa23.4■■□□□ 1.34
GPN3-205ENST00000547323 CTAGE1Q96RT6 745 aa23.4■■□□□ 1.34
GPN3-205ENST00000547323 LXNQ9BS40 222 aa23.4■■□□□ 1.34
GPN3-205ENST00000547323 FBXO2Q9UK22 296 aaPredicted RBP23.4■■□□□ 1.34
GPN3-205ENST00000547323 DCDC2CA8MYV0 355 aa23.39■■□□□ 1.33
GPN3-205ENST00000547323 IGBP1P78318 339 aa23.39■■□□□ 1.33
GPN3-205ENST00000547323 PPFIA1Q13136 1202 aa23.39■■□□□ 1.33
GPN3-205ENST00000547323 GRIK4Q16099 956 aa23.39■■□□□ 1.33
GPN3-205ENST00000547323 PTGISQ16647 500 aa23.39■■□□□ 1.33
GPN3-205ENST00000547323 CATSPER3Q86XQ3 398 aa23.39■■□□□ 1.33
GPN3-205ENST00000547323 C7orf61Q8IZ16 206 aa23.39■■□□□ 1.33
GPN3-205ENST00000547323 LMBR1Q8WVP7 490 aa23.39■■□□□ 1.33
GPN3-205ENST00000547323 ATP6V0A1Q93050 837 aa23.39■■□□□ 1.33
GPN3-205ENST00000547323 ZBTB10Q96DT7 871 aa23.39■■□□□ 1.33
GPN3-205ENST00000547323 TOX2Q96NM4 488 aa23.39■■□□□ 1.33
GPN3-205ENST00000547323 CLIC6Q96NY7 704 aa23.39■■□□□ 1.33
GPN3-205ENST00000547323 SEZ6LQ9BYH1 1024 aa23.39■■□□□ 1.33
GPN3-205ENST00000547323 C17orf102A2RUQ5 167 aa23.38■■□□□ 1.33
GPN3-205ENST00000547323 DDX11L8A8MPP1 907 aa23.38■■□□□ 1.33
GPN3-205ENST00000547323 ZBTB42B2RXF5 422 aa23.38■■□□□ 1.33
GPN3-205ENST00000547323 HBP1O60381 514 aa23.38■■□□□ 1.33
GPN3-205ENST00000547323 EVI5O60447 810 aa23.38■■□□□ 1.33
GPN3-205ENST00000547323 OATP04181 439 aa23.38■■□□□ 1.33
GPN3-205ENST00000547323 HOXC8P31273 242 aa23.38■■□□□ 1.33
GPN3-205ENST00000547323 ECM1Q16610 540 aa23.38■■□□□ 1.33
GPN3-205ENST00000547323 MARCH8Q5T0T0 291 aa23.38■■□□□ 1.33
GPN3-205ENST00000547323 SH3RF1Q7Z6J0 888 aa23.38■■□□□ 1.33
GPN3-205ENST00000547323 BBXQ8WY36 941 aaPredicted RBP23.38■■□□□ 1.33
GPN3-205ENST00000547323 SH2D3AQ9BRG2 576 aa23.38■■□□□ 1.33
GPN3-205ENST00000547323 MMTAG2Q9BU76 263 aaKnown RBP23.38■■□□□ 1.33
GPN3-205ENST00000547323 CIZ1Q9ULV3 898 aaPredicted RBP23.38■■□□□ 1.33
GPN3-205ENST00000547323 MROH7Q68CQ1 1323 aa23.37■■□□□ 1.33
GPN3-205ENST00000547323 SPTLC2O15270 562 aa23.37■■□□□ 1.33
GPN3-205ENST00000547323 TREHO43280 583 aa23.37■■□□□ 1.33
GPN3-205ENST00000547323 CYP2C9P11712 490 aa23.37■■□□□ 1.33
GPN3-205ENST00000547323 ADAM17P78536 824 aa23.37■■□□□ 1.33
GPN3-205ENST00000547323 SPECC1Q5M775 1068 aa23.37■■□□□ 1.33
GPN3-205ENST00000547323 ATL3Q6DD88 541 aa23.37■■□□□ 1.33
GPN3-205ENST00000547323 ANO5Q75V66 913 aa23.37■■□□□ 1.33
GPN3-205ENST00000547323 ERMNQ8TAM6 284 aa23.37■■□□□ 1.33
GPN3-205ENST00000547323 POLR3CQ9BUI4 534 aaPredicted RBP23.37■■□□□ 1.33
GPN3-205ENST00000547323 RAB34Q9BZG1 259 aa23.37■■□□□ 1.33
GPN3-205ENST00000547323 ZSWIM4Q9H7M6 989 aa23.37■■□□□ 1.33
GPN3-205ENST00000547323 NRBP2Q9NSY0 501 aa23.37■■□□□ 1.33
GPN3-205ENST00000547323 SRPRBQ9Y5M8 271 aaKnown RBP23.37■■□□□ 1.33
GPN3-205ENST00000547323 EVPLQ92817 2033 aa23.37■■□□□ 1.33
GPN3-205ENST00000547323 NRCAMQ92823 1304 aa23.36■■□□□ 1.33
GPN3-205ENST00000547323 YEATS4O95619 227 aa23.36■■□□□ 1.33
GPN3-205ENST00000547323 CCT6AP40227 531 aaKnown RBP23.36■■□□□ 1.33
GPN3-205ENST00000547323 XKR3Q5GH77 459 aa23.36■■□□□ 1.33
GPN3-205ENST00000547323 C4orf19Q8IY42 314 aa23.36■■□□□ 1.33
GPN3-205ENST00000547323 ZNF579Q8NAF0 562 aaKnown RBP23.36■■□□□ 1.33
GPN3-205ENST00000547323 FAM167AQ96KS9 214 aa23.36■■□□□ 1.33
GPN3-205ENST00000547323 CSRNP2Q9H175 543 aa23.36■■□□□ 1.33
GPN3-205ENST00000547323 TUFT1Q9NNX1 390 aa23.36■■□□□ 1.33
GPN3-205ENST00000547323 SEPT9Q9UHD8 586 aaPredicted RBP23.36■■□□□ 1.33
GPN3-205ENST00000547323 RCOR1Q9UKL0 485 aa23.36■■□□□ 1.33
GPN3-205ENST00000547323 CFAP45Q9UL16 551 aa23.36■■□□□ 1.33
GPN3-205ENST00000547323 TNRC18O15417 2968 aaPredicted RBP23.35■■□□□ 1.33
GPN3-205ENST00000547323 TLR3O15455 904 aaKnown RBP23.35■■□□□ 1.33
GPN3-205ENST00000547323 CLTBP09497 229 aa23.35■■□□□ 1.33
GPN3-205ENST00000547323 NCLP19338 710 aaKnown RBP23.35■■□□□ 1.33
GPN3-205ENST00000547323 RPA1P27694 616 aa23.35■■□□□ 1.33
GPN3-205ENST00000547323 PLA2G4FQ68DD2 849 aa23.35■■□□□ 1.33
GPN3-205ENST00000547323 POTEGQ6S5H5 508 aa23.35■■□□□ 1.33
GPN3-205ENST00000547323 USP49Q70CQ1 688 aa23.35■■□□□ 1.33
GPN3-205ENST00000547323 NEK9Q8TD19 979 aa23.35■■□□□ 1.33
GPN3-205ENST00000547323 SNX29Q8TEQ0 813 aa23.35■■□□□ 1.33
GPN3-205ENST00000547323 PIGOQ8TEQ8 1089 aa23.35■■□□□ 1.33
GPN3-205ENST00000547323 WNT8BQ93098 351 aa23.35■■□□□ 1.33
GPN3-205ENST00000547323 NIFKQ9BYG3 293 aaKnown RBP23.35■■□□□ 1.33
GPN3-205ENST00000547323 PDLIM7Q9NR12 457 aa23.35■■□□□ 1.33
GPN3-205ENST00000547323 TMEM39AQ9NV64 488 aa23.35■■□□□ 1.33
GPN3-205ENST00000547323 ATP6V1DQ9Y5K8 247 aa23.35■■□□□ 1.33
GPN3-205ENST00000547323 MORC2Q9Y6X9 1032 aaPredicted RBP23.35■■□□□ 1.33
GPN3-205ENST00000547323 TRIM43BA6NCK2 446 aa23.34■■□□□ 1.33
GPN3-205ENST00000547323 RRN3P2A6NIE6 340 aa23.34■■□□□ 1.33
GPN3-205ENST00000547323 YWHABP31946 246 aaKnown RBP23.34■■□□□ 1.33
GPN3-205ENST00000547323 LONP1P36776 959 aaKnown RBP23.34■■□□□ 1.33
GPN3-205ENST00000547323 NPEPPSP55786 919 aa23.34■■□□□ 1.33
GPN3-205ENST00000547323 ZNF484Q5JVG2 852 aa23.34■■□□□ 1.33
GPN3-205ENST00000547323 KRT79Q5XKE5 535 aa23.34■■□□□ 1.33
GPN3-205ENST00000547323 RUFY4Q6ZNE9 571 aa23.34■■□□□ 1.33
GPN3-205ENST00000547323 KRI1Q8N9T8 703 aaKnown RBP23.34■■□□□ 1.33
GPN3-205ENST00000547323 DHX38Q92620 1227 aaKnown RBP23.34■■□□□ 1.33
GPN3-205ENST00000547323 TRIM43Q96BQ3 446 aaPredicted RBP23.34■■□□□ 1.33
GPN3-205ENST00000547323 PRDM5Q9NQX1 630 aaPredicted RBP23.34■■□□□ 1.33
GPN3-205ENST00000547323 CHMP5Q9NZZ3 219 aa23.34■■□□□ 1.33
GPN3-205ENST00000547323 NOD1Q9Y239 953 aa23.34■■□□□ 1.33
GPN3-205ENST00000547323 RBAK-RBAKDNI3L0D1 243 aa23.33■■□□□ 1.33
GPN3-205ENST00000547323 DKC1O60832 514 aaKnown RBP eCLIP23.33■■□□□ 1.33
GPN3-205ENST00000547323 PPP6R2O75170 966 aa23.33■■□□□ 1.33
GPN3-205ENST00000547323 LYPLA2O95372 231 aa23.33■■□□□ 1.33
GPN3-205ENST00000547323 GNAT1P11488 350 aa23.33■■□□□ 1.33
GPN3-205ENST00000547323 SYN1P17600 705 aa23.33■■□□□ 1.33
GPN3-205ENST00000547323 KLRC1P26715 233 aa23.33■■□□□ 1.33
GPN3-205ENST00000547323 KRT85P78386 507 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms