RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 GRIK4Q16099 956 aa23.32■■□□□ 1.32
SCARB1-211ENST00000546215 PTGISQ16647 500 aa23.32■■□□□ 1.32
SCARB1-211ENST00000546215 TRMT1LQ7Z2T5 733 aaKnown RBP23.32■■□□□ 1.32
SCARB1-211ENST00000546215 LMBR1Q8WVP7 490 aa23.32■■□□□ 1.32
SCARB1-211ENST00000546215 TNPO1Q92973 898 aaKnown RBP23.32■■□□□ 1.32
SCARB1-211ENST00000546215 LXNQ9BS40 222 aa23.32■■□□□ 1.32
SCARB1-211ENST00000546215 RAB34Q9BZG1 259 aa23.32■■□□□ 1.32
SCARB1-211ENST00000546215 PDLIM7Q9NR12 457 aa23.32■■□□□ 1.32
SCARB1-211ENST00000546215 LRWD1Q9UFC0 647 aa23.32■■□□□ 1.32
SCARB1-211ENST00000546215 VWA3AA6NCI4 1184 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 OATP04181 439 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 NUCB2P80303 420 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 CTTNQ14247 550 aaKnown RBP23.31■■□□□ 1.32
SCARB1-211ENST00000546215 SLC39A14Q15043 492 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 SH3RF1Q7Z6J0 888 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 NEK9Q8TD19 979 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 FAM167AQ96KS9 214 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 TBX21Q9UL17 535 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 MORC2Q9Y6X9 1032 aaPredicted RBP23.31■■□□□ 1.32
SCARB1-211ENST00000546215 ZBTB42B2RXF5 422 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 TREHO43280 583 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 SPATA31C1P0DKV0 1188 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 GNAT1P11488 350 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 MARCH8Q5T0T0 291 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 ATL3Q6DD88 541 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 TPH2Q8IWU9 490 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 C4orf19Q8IY42 314 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 LINC00301Q8NCQ3 95 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 POLR3CQ9BUI4 534 aaPredicted RBP23.31■■□□□ 1.32
SCARB1-211ENST00000546215 ZSWIM4Q9H7M6 989 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 NRBP2Q9NSY0 501 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 TMEM39AQ9NV64 488 aa23.31■■□□□ 1.32
SCARB1-211ENST00000546215 TRIM43BA6NCK2 446 aa23.3■■□□□ 1.32
SCARB1-211ENST00000546215 RRN3P2A6NIE6 340 aa23.3■■□□□ 1.32
SCARB1-211ENST00000546215 DKC1O60832 514 aaKnown RBP eCLIP23.3■■□□□ 1.321e-7■■■■□ 19.3
SCARB1-211ENST00000546215 CYP2C9P11712 490 aa23.3■■□□□ 1.32
SCARB1-211ENST00000546215 MARCKSP29966 332 aaPredicted RBP23.3■■□□□ 1.32
SCARB1-211ENST00000546215 DNM1Q05193 864 aaKnown RBP23.3■■□□□ 1.32
SCARB1-211ENST00000546215 XKR3Q5GH77 459 aa23.3■■□□□ 1.32
SCARB1-211ENST00000546215 CATSPER3Q86XQ3 398 aa23.3■■□□□ 1.32
SCARB1-211ENST00000546215 ERMNQ8TAM6 284 aa23.3■■□□□ 1.32
SCARB1-211ENST00000546215 TRIM43Q96BQ3 446 aaPredicted RBP23.3■■□□□ 1.32
SCARB1-211ENST00000546215 MBLAC1A4D2B0 266 aaPredicted RBP23.29■■□□□ 1.32
SCARB1-211ENST00000546215 PP2D1A8MPX8 630 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 KIAA0355O15063 1070 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 MED24O75448 989 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 LYPLA2O95372 231 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 RPA1P27694 616 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 IGBP1P78318 339 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 GRIN1Q05586 938 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 ZNF484Q5JVG2 852 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 ANO5Q75V66 913 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 TRAPPC12Q8WVT3 735 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 NIFKQ9BYG3 293 aaKnown RBP23.29■■□□□ 1.32
SCARB1-211ENST00000546215 TUFT1Q9NNX1 390 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 PRDM5Q9NQX1 630 aaPredicted RBP23.29■■□□□ 1.32
SCARB1-211ENST00000546215 NOD1Q9Y239 953 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 NR2E3Q9Y5X4 410 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 COL1A2P08123 1366 aa23.29■■□□□ 1.32
SCARB1-211ENST00000546215 TMEM150BA6NC51 233 aa23.28■■□□□ 1.32
SCARB1-211ENST00000546215 YEATS4O95619 227 aa23.28■■□□□ 1.32
SCARB1-211ENST00000546215 CDC25AP30304 524 aa23.28■■□□□ 1.32
SCARB1-211ENST00000546215 SERINC5Q86VE9 423 aa23.28■■□□□ 1.32
SCARB1-211ENST00000546215 TUBE1Q9UJT0 475 aa23.28■■□□□ 1.32
SCARB1-211ENST00000546215 FBXO2Q9UK22 296 aaPredicted RBP23.28■■□□□ 1.32
SCARB1-211ENST00000546215 SRPRBQ9Y5M8 271 aaKnown RBP23.28■■□□□ 1.32
SCARB1-211ENST00000546215 CEP290O15078 2479 aa23.28■■□□□ 1.32
SCARB1-211ENST00000546215 DDX11L8A8MPP1 907 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 PTK7Q13308 1070 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 STK38Q15208 465 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 TARBP2Q15633 366 aaKnown RBP23.27■■□□□ 1.32
SCARB1-211ENST00000546215 HAUS3Q68CZ6 603 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 DHX38Q92620 1227 aaKnown RBP23.27■■□□□ 1.32
SCARB1-211ENST00000546215 ZBTB10Q96DT7 871 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 AK8Q96MA6 479 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 MMTAG2Q9BU76 263 aaKnown RBP23.27■■□□□ 1.32
SCARB1-211ENST00000546215 CFAP45Q9UL16 551 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 CIZ1Q9ULV3 898 aaPredicted RBP23.27■■□□□ 1.32
SCARB1-211ENST00000546215 ATP6V1DQ9Y5K8 247 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 STK24Q9Y6E0 443 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 ZBTB39O15060 712 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 YWHABP31946 246 aaKnown RBP23.27■■□□□ 1.32
SCARB1-211ENST00000546215 ECM1Q16610 540 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 WNT8BQ93098 351 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 CHAMP1Q96JM3 812 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 CEP89Q96ST8 783 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 PCDH10Q9P2E7 1040 aa23.27■■□□□ 1.32
SCARB1-211ENST00000546215 SEPT9Q9UHD8 586 aaPredicted RBP23.27■■□□□ 1.32
SCARB1-211ENST00000546215 ZMYND8Q9ULU4 1186 aaPredicted RBP23.27■■□□□ 1.32
SCARB1-211ENST00000546215 SPTLC2O15270 562 aa23.26■■□□□ 1.31
SCARB1-211ENST00000546215 SYN1P17600 705 aa23.26■■□□□ 1.31
SCARB1-211ENST00000546215 MUTP22033 750 aa23.26■■□□□ 1.31
SCARB1-211ENST00000546215 ITGB8P26012 769 aa23.26■■□□□ 1.31
SCARB1-211ENST00000546215 KLRC1P26715 233 aa23.26■■□□□ 1.31
SCARB1-211ENST00000546215 LONP1P36776 959 aaKnown RBP23.26■■□□□ 1.31
SCARB1-211ENST00000546215 CCT6AP40227 531 aaKnown RBP23.26■■□□□ 1.31
SCARB1-211ENST00000546215 KRT79Q5XKE5 535 aa23.26■■□□□ 1.31
SCARB1-211ENST00000546215 MTHFD1LQ6UB35 978 aa23.26■■□□□ 1.31
SCARB1-211ENST00000546215 SNX29Q8TEQ0 813 aa23.26■■□□□ 1.31
SCARB1-211ENST00000546215 SH2D3AQ9BRG2 576 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms