RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	SELP	P16109	830 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	PTGS1	P23219	599 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	CNTN2	Q02246	1040 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	TNFAIP2	Q03169	654 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	ZNF543	Q08ER8	600 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	ZNF252P-AS1	Q0IIN9	211 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	TROAP	Q12815	778 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	HSP90AA2P	Q14568	343 aa	Predicted RBP	7.48	□□□□□ -1.21
CIT-213	ENST00000543324	PWP2	Q15269	919 aa	Known RBP	7.48	□□□□□ -1.21
CIT-213	ENST00000543324	MUM1L1	Q5H9M0	696 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	SYCE2	Q6PIF2	218 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	KCTD1	Q719H9	257 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	ARMCX2	Q7L311	632 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	CCDC144CP	Q8IYA2	1237 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	CPXCR1	Q8N123	301 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	ZNF843	Q8N446	348 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	TTC14	Q96N46	770 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	UBL7	Q96S82	380 aa	Predicted RBP	7.48	□□□□□ -1.21
CIT-213	ENST00000543324	POMK	Q9H5K3	350 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	DOCK5	Q9H7D0	1870 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	TBC1D17	Q9HA65	648 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	RNF146	Q9NTX7	359 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	CYP39A1	Q9NYL5	469 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	STX8	Q9UNK0	236 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	WDR19	Q8NEZ3	1342 aa		7.48	□□□□□ -1.21
CIT-213	ENST00000543324	BAZ2B	Q9UIF8	2168 aa	Known RBP	7.47	□□□□□ -1.21
CIT-213	ENST00000543324	MIA3	Q5JRA6	1907 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	RAD21	O60216	631 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	RANBP6	O60518	1105 aa	Known RBP	7.47	□□□□□ -1.21
CIT-213	ENST00000543324	XRCC6	P12956	609 aa	Known RBP eCLIP	7.47	□□□□□ -1.21
CIT-213	ENST00000543324	EDNRB	P24530	442 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	MFAP1	P55081	439 aa	Known RBP	7.47	□□□□□ -1.21
CIT-213	ENST00000543324	HAND2	P61296	217 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	KCNC4	Q03721	635 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	RBL2	Q08999	1139 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	TDG	Q13569	410 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	FAM47C	Q5HY64	1035 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	TTBK2	Q6IQ55	1244 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	ANKRD54	Q6NXT1	300 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	TMEM184A	Q6ZMB5	413 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	SKAP1	Q86WV1	359 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	FIBCD1	Q8N539	461 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	CCDC155	Q8N6L0	562 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	TDRD5	Q8NAT2	981 aa	Known RBP	7.47	□□□□□ -1.21
CIT-213	ENST00000543324	CLEC4D	Q8WXI8	215 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	CLP1	Q92989	425 aa	Known RBP	7.47	□□□□□ -1.21
CIT-213	ENST00000543324	TOP1MT	Q969P6	601 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	LRIG1	Q96JA1	1093 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	AP5M1	Q9H0R1	490 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	WNT16	Q9UBV4	365 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	CDH22	Q9UJ99	828 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	PLAGL2	Q9UPG8	496 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	SIT1	Q9Y3P8	196 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	FARP1	Q9Y4F1	1045 aa	Predicted RBP	7.47	□□□□□ -1.21
CIT-213	ENST00000543324	NEUROG3	Q9Y4Z2	214 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	ACACA	Q13085	2346 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	RAD50	Q92878	1312 aa		7.47	□□□□□ -1.21
CIT-213	ENST00000543324	RBM47	A0AV96	593 aa	Known RBP	7.46	□□□□□ -1.22
CIT-213	ENST00000543324	TRIM6-TRIM34	B2RNG4	842 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	HIP1	O00291	1037 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	NFIB	O00712	420 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	DYNC1LI2	O43237	492 aa	Predicted RBP	7.46	□□□□□ -1.22
CIT-213	ENST00000543324	PTMS	P20962	102 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	RFX1	P22670	979 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	MCM4	P33991	863 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	TERF1	P54274	439 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	GHRHR	Q02643	423 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	KCNC3	Q14003	757 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	LPAL2	Q16609	132 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	TTC22	Q5TAA0	569 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	SYDE2	Q5VT97	1194 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	PHLDB3	Q6NSJ2	640 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	TAPT1	Q6NXT6	567 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	NFRKB	Q6P4R8	1299 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	NOL8	Q76FK4	1167 aa	Known RBP	7.46	□□□□□ -1.22
CIT-213	ENST00000543324	DGKH	Q86XP1	1220 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	ANKRD35	Q8N283	1001 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	PLCD3	Q8N3E9	789 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	ENAH	Q8N8S7	591 aa	Predicted RBP	7.46	□□□□□ -1.22
CIT-213	ENST00000543324	DDX11	Q96FC9	970 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	TBC1D32	Q96NH3	1257 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	NECTIN4	Q96NY8	510 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	TRERF1	Q96PN7	1200 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	CTAGE1	Q96RT6	745 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	APOL5	Q9BWW9	433 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	PLVAP	Q9BX97	442 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	MAF1	Q9H063	256 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	ZMYND15	Q9H091	742 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	RNF41	Q9H4P4	317 aa	Predicted RBP	7.46	□□□□□ -1.22
CIT-213	ENST00000543324	TLE6	Q9H808	572 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	HOMER2	Q9NSB8	354 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	MSRB2	Q9Y3D2	182 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	GREB1	Q4ZG55	1949 aa		7.46	□□□□□ -1.22
CIT-213	ENST00000543324	KIAA1671	Q9BY89	1806 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	DENND4A	Q7Z401	1863 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	ASB14	A6NK59	587 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	LAMTOR5	O43504	91 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	ALAS1	P13196	640 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	SLC16A2	P36021	539 aa		7.45	□□□□□ -1.22
CIT-213	ENST00000543324	NOVA1	P51513	510 aa	Known RBP	7.45	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms